FFCP PHASE1:Hg19::chr17:8063896..8063935,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:8063896..8063935,-
|short_description=p5@VAMP2
|description=CAGE_peak_5_at_VAMP2_5end
|association_with_transcript=11bp_to_AL050223_5end
|EntrezGene=6844...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6844 | |EntrezGene=6844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12643 | |HGNC=12643 | ||
|TSSclassifier=strong | |||
|UniProt=Q69Z01 | |UniProt=Q69Z01 | ||
|association_with_transcript=11bp_to_AL050223_5end | |||
|cluster_id=chr17:8063896..8063935,- | |||
|coexpression_cluster_id=C317 | |||
|description=CAGE_peak_5_at_VAMP2_5end | |||
|id=chr17:8063896..8063935,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.79e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.41e-26!57;UBERON:0005068!4.41e-26!57;UBERON:0006241!4.41e-26!57;UBERON:0007135!4.41e-26!57;UBERON:0000073!6.93e-26!94;UBERON:0001016!6.93e-26!94;UBERON:0001017!8.73e-26!82;UBERON:0005743!1.41e-25!86;UBERON:0007023!9.68e-23!115;UBERON:0002780!2.16e-22!41;UBERON:0001890!2.16e-22!41;UBERON:0006240!2.16e-22!41;UBERON:0003080!4.83e-21!42;UBERON:0000955!9.66e-21!69;UBERON:0006238!9.66e-21!69;UBERON:0002616!1.63e-20!59;UBERON:0002020!6.66e-19!34;UBERON:0003528!6.66e-19!34;UBERON:0001893!2.58e-18!34;UBERON:0002791!7.43e-18!33;UBERON:0002346!1.12e-17!90;UBERON:0001869!1.22e-17!32;UBERON:0003075!5.78e-17!86;UBERON:0007284!5.78e-17!86;UBERON:0002619!4.58e-15!22;UBERON:0000956!5.56e-14!25;UBERON:0000203!5.56e-14!25;UBERON:0001950!8.47e-14!20;UBERON:0000924!3.71e-12!173;UBERON:0006601!3.71e-12!173;UBERON:0003056!1.28e-11!61;UBERON:0004121!1.62e-11!169;UBERON:0000153!9.16e-10!129;UBERON:0007811!9.16e-10!129;UBERON:0000033!1.34e-09!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.97e-21;41!UBERON:0001890;3.97e-21;41!UBERON:0003528;5.44e-21;34!UBERON:0002020;5.44e-21;34!UBERON:0001869;6.55e-21;32!UBERON:0002791;7.33e-21;32!UBERON:0001893;3.50e-20;34!UBERON:0002619;2.74e-19;22!UBERON:0000073;3.00e-18;53!UBERON:0002616;3.00e-18;53!UBERON:0000956;4.51e-18;25!UBERON:0000203;4.51e-18;25!UBERON:0001950;1.27e-17;20!UBERON:0000955;3.48e-13;68!UBERON:0001017;1.77e-12;75!UBERON:0001016;1.21e-11;83!UBERON:0002420;5.35e-08;9!UBERON:0007245;5.35e-08;9!UBERON:0010009;5.35e-08;9!UBERON:0010011;5.35e-08;9!UBERON:0000454;5.35e-08;9!UBERON:0007023;5.81e-08;114!UBERON:0000125;6.82e-08;9!UBERON:0002308;6.82e-08;9!UBERON:0001871;4.12e-07;6!UBERON:0001894;7.71e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.18e-35,56;UBERON:0005068,3.18e-35,56;UBERON:0006241,3.18e-35,56;UBERON:0007135,3.18e-35,56;UBERON:0001017,1.91e-33,81;UBERON:0000073,4.15e-33,53;UBERON:0002616,4.15e-33,53;UBERON:0001016,3.23e-31,89;UBERON:0002780,6.15e-29,41;UBERON:0001890,6.15e-29,41;UBERON:0003080,6.15e-29,41;UBERON:0006240,6.15e-29,41;UBERON:0000955,8.20e-27,68;UBERON:0006238,8.20e-27,68;UBERON:0007023,3.21e-26,114;UBERON:0003075,2.00e-25,82;UBERON:0007284,2.00e-25,82;UBERON:0002346,3.92e-25,86;UBERON:0003528,2.35e-24,34;UBERON:0002020,2.35e-24,34;UBERON:0001893,1.40e-23,34;UBERON:0002791,9.00e-23,32;UBERON:0001869,1.07e-22,32;UBERON:0010371,1.13e-19,104;UBERON:0002619,2.93e-19,22;UBERON:0003056,1.19e-18,61;UBERON:0000956,6.82e-18,25;UBERON:0000203,6.82e-18,25;UBERON:0001950,1.34e-17,20;UBERON:0011216,1.82e-15,223;UBERON:0010314,2.34e-15,132;UBERON:0004121,1.16e-14,171;UBERON:0000924,1.16e-14,171;UBERON:0006601,1.16e-14,171;UBERON:0002420,5.10e-08,9;UBERON:0007245,5.10e-08,9;UBERON:0010009,5.10e-08,9;UBERON:0010011,5.10e-08,9;UBERON:0000454,5.10e-08,9;UBERON:0000125,6.48e-08,9;UBERON:0002308,6.48e-08,9;UBERON:0000025,1.20e-07,192;UBERON:0003076,1.23e-07,15;UBERON:0003057,1.23e-07,15;UBERON:0001871,4.29e-07,6;UBERON:0001894,8.90e-07,7;UBERON:0006222,8.90e-07,7 | |||
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| ||
|short_description=p5@VAMP2 | |||
}} | }} |
Latest revision as of 13:32, 18 September 2015
Short description: | p5@VAMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VAMP2_5end |
Coexpression cluster: | C317_Neutrophils_medial_amygdala_occipital_hippocampus_brain_parietal |
Association with transcript: | 11bp_to_AL050223_5end |
EntrezGene: | VAMP2 |
HGNC: | 12643 |
UniProt: | Q69Z01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data