FFCP PHASE1:Hg19::chr12:113827870..113828002,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:113827870..113828002,+ | |||
|coexpression_cluster_id=C660 | |coexpression_cluster_id=C660 | ||
|description=CAGE_peak_at_chr12:113827870..113828002,+ | |description=CAGE_peak_at_chr12:113827870..113828002,+ | ||
|id=chr12:113827870..113828002,+ | |id=chr12:113827870..113828002,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.91e-07!75 | |ontology_enrichment_celltype=CL:0000057!1.91e-07!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.06e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.37e-10!511;UBERON:0001049!6.07e-09!57;UBERON:0005068!6.07e-09!57;UBERON:0006241!6.07e-09!57;UBERON:0007135!6.07e-09!57;UBERON:0000468!2.87e-08!659;UBERON:0002616!6.17e-08!59;UBERON:0003075!1.66e-07!86;UBERON:0007284!1.66e-07!86;UBERON:0002780!3.03e-07!41;UBERON:0001890!3.03e-07!41;UBERON:0006240!3.03e-07!41;UBERON:0002346!9.30e-07!90 | |ontology_enrichment_uberon=UBERON:0000062!1.37e-10!511;UBERON:0001049!6.07e-09!57;UBERON:0005068!6.07e-09!57;UBERON:0006241!6.07e-09!57;UBERON:0007135!6.07e-09!57;UBERON:0000468!2.87e-08!659;UBERON:0002616!6.17e-08!59;UBERON:0003075!1.66e-07!86;UBERON:0007284!1.66e-07!86;UBERON:0002780!3.03e-07!41;UBERON:0001890!3.03e-07!41;UBERON:0006240!3.03e-07!41;UBERON:0002346!9.30e-07!90 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.45e-09,56;UBERON:0005068,1.45e-09,56;UBERON:0006241,1.45e-09,56;UBERON:0007135,1.45e-09,56;UBERON:0000073,6.78e-09,53;UBERON:0002616,6.78e-09,53;UBERON:0003075,2.27e-08,82;UBERON:0007284,2.27e-08,82;UBERON:0002346,1.58e-07,86;UBERON:0002780,3.02e-07,41;UBERON:0001890,3.02e-07,41;UBERON:0003080,3.02e-07,41;UBERON:0006240,3.02e-07,41;UBERON:0010371,3.52e-07,104;UBERON:0000955,5.34e-07,68;UBERON:0006238,5.34e-07,68 | |||
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| ||
|short_description=p@chr12:113827870..113828002,+ | |short_description=p@chr12:113827870..113828002,+ | ||
}} | }} |
Latest revision as of 05:13, 24 July 2015
Short description: | p@chr12:113827870..113828002, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:113827870..113828002, + |
Coexpression cluster: | C660_Monocytederived_liposarcoma_Smooth_Synoviocyte_pituitary_Chondrocyte_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.06e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.45e-09 | 56 |
neural rod | 1.45e-09 | 56 |
future spinal cord | 1.45e-09 | 56 |
neural keel | 1.45e-09 | 56 |
regional part of nervous system | 6.78e-09 | 53 |
regional part of brain | 6.78e-09 | 53 |
neural plate | 2.27e-08 | 82 |
presumptive neural plate | 2.27e-08 | 82 |
neurectoderm | 1.58e-07 | 86 |
regional part of forebrain | 3.02e-07 | 41 |
forebrain | 3.02e-07 | 41 |
anterior neural tube | 3.02e-07 | 41 |
future forebrain | 3.02e-07 | 41 |
ecto-epithelium | 3.52e-07 | 104 |
brain | 5.34e-07 | 68 |
future brain | 5.34e-07 | 68 |