FFCP PHASE1:Hg19::chr12:111115637..111115643,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:111115637..111115643,- | |||
|coexpression_cluster_id=C169 | |coexpression_cluster_id=C169 | ||
|description=CAGE_peak_at_chr12:111115637..111115643,- | |description=CAGE_peak_at_chr12:111115637..111115643,- | ||
|id=chr12:111115637..111115643,- | |id=chr12:111115637..111115643,- | ||
|ontology_enrichment_celltype=CL:0000945!2.83e-37!24;CL:0000826!2.83e-37!24;CL:0000037!4.09e-19!172;CL:0000566!4.09e-19!172;CL:0000988!1.20e-17!182;CL:0000838!1.43e-17!52;CL:0000542!3.64e-17!53;CL:0000051!3.64e-17!53;CL:0002032!6.09e-16!165;CL:0000837!6.09e-16!165;CL:0000817!3.12e-14!3;CL:0000784!1.59e-13!3;CL:0000236!7.13e-11!14;CL:0000785!3.83e-10!2;CL:0000955!3.83e-10!2;CL:0000818!3.83e-10!2;CL:0000954!3.83e-10!2;CL:0000816!3.83e-10!2;CL:0002087!2.33e-08!119;CL:0000738!2.37e-08!140;CL:0002031!7.42e-08!124 | |ontology_enrichment_celltype=CL:0000945!2.83e-37!24;CL:0000826!2.83e-37!24;CL:0000037!4.09e-19!172;CL:0000566!4.09e-19!172;CL:0000988!1.20e-17!182;CL:0000838!1.43e-17!52;CL:0000542!3.64e-17!53;CL:0000051!3.64e-17!53;CL:0002032!6.09e-16!165;CL:0000837!6.09e-16!165;CL:0000817!3.12e-14!3;CL:0000784!1.59e-13!3;CL:0000236!7.13e-11!14;CL:0000785!3.83e-10!2;CL:0000955!3.83e-10!2;CL:0000818!3.83e-10!2;CL:0000954!3.83e-10!2;CL:0000816!3.83e-10!2;CL:0002087!2.33e-08!119;CL:0000738!2.37e-08!140;CL:0002031!7.42e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.03e-29;24!CL:0000946;2.05e-29;1!CL:0000785;2.05e-29;1!CL:0000819;2.05e-29;1!CL:0000786;2.05e-29;1!CL:0000542;4.65e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000785,3.58e-57,2;CL:0000955,3.58e-57,2;CL:0000818,3.58e-57,2;CL:0000954,3.58e-57,2;CL:0000816,3.58e-57,2;CL:0000817,1.49e-38,3;CL:0000946,9.99e-30,1;CL:0000786,9.99e-30,1;CL:0000980,9.99e-30,1;CL:0000945,1.03e-29,24;CL:0000826,1.03e-29,24;CL:0000819,2.37e-29,1;CL:0000838,5.84e-14,52;CL:0000542,1.05e-13,53;CL:0000051,1.05e-13,53;CL:0000236,4.21e-09,14;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000954;6.35e-57;2!CL:0000051;4.65e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!1.19e-25!51;DOID:0060083!1.19e-25!51;DOID:1240!1.84e-15!39;DOID:0060058!2.68e-15!10;DOID:8692!3.64e-14!31;DOID:0050686!1.61e-09!137 | |ontology_enrichment_disease=DOID:2531!1.19e-25!51;DOID:0060083!1.19e-25!51;DOID:1240!1.84e-15!39;DOID:0060058!2.68e-15!10;DOID:8692!3.64e-14!31;DOID:0050686!1.61e-09!137 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.67e-45;10!DOID:2355;7.47e-30;1!DOID:0060073;2.05e-29;1!DOID:8675;2.05e-29;1!DOID:74;1.15e-15;2!DOID:2531;2.10e-11;51!DOID:0060083;2.10e-11;51!DOID:1287;1.70e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.22e-45,10;DOID:2355,7.48e-30,1;DOID:0060073,2.37e-29,1;DOID:8675,2.37e-29,1;DOID:2531,3.72e-20,51;DOID:0060083,3.72e-20,51;DOID:74,1.15e-15,2;DOID:1287,1.70e-08,4;DOID:0050686,1.38e-07,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr12:111115637..111115643,- | |short_description=p@chr12:111115637..111115643,- | ||
}} | }} |
Latest revision as of 04:56, 24 July 2015
Short description: | p@chr12:111115637..111115643, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:111115637..111115643, - |
Coexpression cluster: | C169_hereditary_adult_gall_lymphangiectasia_chronic_b_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature B cell | 3.58e-57 | 2 |
pre-B-II cell | 3.58e-57 | 2 |
transitional stage B cell | 3.58e-57 | 2 |
small pre-B-II cell | 3.58e-57 | 2 |
immature B cell | 3.58e-57 | 2 |
precursor B cell | 1.49e-38 | 3 |
antibody secreting cell | 9.99e-30 | 1 |
plasma cell | 9.99e-30 | 1 |
plasmablast | 9.99e-30 | 1 |
lymphocyte of B lineage | 1.03e-29 | 24 |
pro-B cell | 1.03e-29 | 24 |
B-1 B cell | 2.37e-29 | 1 |
lymphoid lineage restricted progenitor cell | 5.84e-14 | 52 |
lymphocyte | 1.05e-13 | 53 |
common lymphoid progenitor | 1.05e-13 | 53 |
B cell | 4.21e-09 | 14 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.22e-45 | 10 |
anemia | 7.48e-30 | 1 |
lymphatic system cancer | 2.37e-29 | 1 |
lymphosarcoma | 2.37e-29 | 1 |
hematologic cancer | 3.72e-20 | 51 |
immune system cancer | 3.72e-20 | 51 |
hematopoietic system disease | 1.15e-15 | 2 |
cardiovascular system disease | 1.70e-08 | 4 |
organ system cancer | 1.38e-07 | 137 |