FFCP PHASE1:Hg19::chr12:104995308..104995320,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50515 | |EntrezGene=50515 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17422 | |HGNC=17422 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-360bp_to_AY533205_5end | |association_with_transcript=-360bp_to_AY533205_5end | ||
|cluster_id=chr12:104995308..104995320,+ | |||
|coexpression_cluster_id=C2178 | |coexpression_cluster_id=C2178 | ||
|description=CAGE_peak_15_at_CHST11_5end | |description=CAGE_peak_15_at_CHST11_5end | ||
|id=chr12:104995308..104995320,+ | |id=chr12:104995308..104995320,+ | ||
|ontology_enrichment_celltype=CL:0000763!5.41e-20!112;CL:0000049!5.41e-20!112;CL:0002194!4.84e-19!63;CL:0000576!4.84e-19!63;CL:0000040!4.84e-19!63;CL:0000559!4.84e-19!63;CL:0002009!2.55e-18!65;CL:0000839!1.07e-16!70;CL:0000557!2.12e-16!71;CL:0002057!2.92e-16!42;CL:0000990!6.56e-16!8;CL:0000766!4.96e-15!76;CL:0000860!5.87e-15!45;CL:0000451!6.75e-13!10;CL:0002032!1.07e-12!165;CL:0000837!1.07e-12!165;CL:0000037!6.47e-12!172;CL:0000566!6.47e-12!172;CL:0000988!6.64e-11!182;CL:0000738!6.20e-10!140;CL:0002087!3.88e-09!119;CL:0002031!1.37e-08!124;CL:0000453!2.10e-07!5;CL:0000840!3.75e-07!5;CL:0001029!3.75e-07!5 | |ontology_enrichment_celltype=CL:0000763!5.41e-20!112;CL:0000049!5.41e-20!112;CL:0002194!4.84e-19!63;CL:0000576!4.84e-19!63;CL:0000040!4.84e-19!63;CL:0000559!4.84e-19!63;CL:0002009!2.55e-18!65;CL:0000839!1.07e-16!70;CL:0000557!2.12e-16!71;CL:0002057!2.92e-16!42;CL:0000990!6.56e-16!8;CL:0000766!4.96e-15!76;CL:0000860!5.87e-15!45;CL:0000451!6.75e-13!10;CL:0002032!1.07e-12!165;CL:0000837!1.07e-12!165;CL:0000037!6.47e-12!172;CL:0000566!6.47e-12!172;CL:0000988!6.64e-11!182;CL:0000738!6.20e-10!140;CL:0002087!3.88e-09!119;CL:0002031!1.37e-08!124;CL:0000453!2.10e-07!5;CL:0000840!3.75e-07!5;CL:0001029!3.75e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.17e-26;33!CL:0002057;1.17e-26;33!CL:0000840;5.31e-24;5!CL:0000473;4.25e-19;39!CL:0000234;4.25e-19;39!CL:0000990;3.09e-16;8!CL:0000576;9.27e-15;48!CL:0000451;2.11e-13;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.05e-29,59;CL:0000576,1.05e-29,59;CL:0000040,1.05e-29,59;CL:0000559,1.05e-29,59;CL:0002009,1.02e-28,61;CL:0000839,1.64e-26,66;CL:0000557,4.15e-26,67;CL:0000766,2.93e-24,72;CL:0000840,5.74e-24,5;CL:0001029,5.74e-24,5;CL:0000860,1.98e-22,42;CL:0002057,1.98e-22,42;CL:0000473,1.47e-19,48;CL:0000234,1.47e-19,48;CL:0000763,4.28e-19,108;CL:0000049,4.28e-19,108;CL:0002087,6.67e-18,115;CL:0002031,4.04e-17,120;CL:0000990,3.25e-16,8;CL:0000738,5.36e-15,136;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0000037,3.40e-14,168;CL:0000988,2.02e-13,177;CL:0000451,2.20e-13,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-18;42!CL:0000049;6.95e-07;108 | |||
|ontology_enrichment_disease=DOID:1036!3.59e-08!8 | |ontology_enrichment_disease=DOID:1036!3.59e-08!8 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.65e-14!80;UBERON:0001474!9.01e-13!86;UBERON:0004765!1.78e-11!101;UBERON:0001434!1.78e-11!101;UBERON:0002390!2.47e-11!102;UBERON:0003061!2.47e-11!102;UBERON:0002193!3.89e-11!112;UBERON:0002405!1.01e-10!115 | |ontology_enrichment_uberon=UBERON:0002371!4.65e-14!80;UBERON:0001474!9.01e-13!86;UBERON:0004765!1.78e-11!101;UBERON:0001434!1.78e-11!101;UBERON:0002390!2.47e-11!102;UBERON:0003061!2.47e-11!102;UBERON:0002193!3.89e-11!112;UBERON:0002405!1.01e-10!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.93e-23,76;UBERON:0001474,3.15e-21,82;UBERON:0004765,2.79e-19,90;UBERON:0002405,1.24e-18,93;UBERON:0002390,1.21e-17,98;UBERON:0003061,1.21e-17,98;UBERON:0001434,2.82e-17,100;UBERON:0002193,6.16e-16,108;UBERON:0002204,5.72e-10,167;UBERON:0003081,5.23e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,1.1507695692886,1.0246428261164,1.41889337933151,0,0,0,0,0,0.224723484445085,0,0,0,1.31940520074686,1.19678194572979,3.83602275479425,0,0.56738522469114,0,0.251248665256743,1.5644487552606,2.38907729175628,0,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,5.51730569212962,4.70150290708022,3.45690697349049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936017060556951,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22724939116194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62568523298871,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0.588187602953219,0.335643173951685,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.551639951094387,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,1.1507695692886,1.0246428261164,1.41889337933151,0,0,0,0,0,0.224723484445085,0,0,0,1.31940520074686,1.19678194572979,3.83602275479425,0,0.56738522469114,0,0.251248665256743,1.5644487552606,2.38907729175628,0,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,5.51730569212962,4.70150290708022,3.45690697349049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936017060556951,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22724939116194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62568523298871,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0.588187602953219,0.335643173951685,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.551639951094387,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p15@CHST11 | |short_description=p15@CHST11 | ||
}} | }} |
Latest revision as of 00:38, 16 September 2015
Short description: | p15@CHST11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CHST11_5end |
Coexpression cluster: | C2178_acute_CD14_Macrophage_Dendritic_anaplastic_chronic_mesothelioma |
Association with transcript: | -360bp_to_AY533205_5end |
EntrezGene: | CHST11 |
HGNC: | 17422 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.05e-29 | 59 |
monocyte | 1.05e-29 | 59 |
monoblast | 1.05e-29 | 59 |
promonocyte | 1.05e-29 | 59 |
macrophage dendritic cell progenitor | 1.02e-28 | 61 |
myeloid lineage restricted progenitor cell | 1.64e-26 | 66 |
granulocyte monocyte progenitor cell | 4.15e-26 | 67 |
myeloid leukocyte | 2.93e-24 | 72 |
immature conventional dendritic cell | 5.74e-24 | 5 |
common dendritic progenitor | 5.74e-24 | 5 |
classical monocyte | 1.98e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.98e-22 | 42 |
defensive cell | 1.47e-19 | 48 |
phagocyte | 1.47e-19 | 48 |
myeloid cell | 4.28e-19 | 108 |
common myeloid progenitor | 4.28e-19 | 108 |
nongranular leukocyte | 6.67e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 4.04e-17 | 120 |
conventional dendritic cell | 3.25e-16 | 8 |
leukocyte | 5.36e-15 | 136 |
hematopoietic oligopotent progenitor cell | 7.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-15 | 161 |
hematopoietic stem cell | 3.40e-14 | 168 |
hematopoietic cell | 2.02e-13 | 177 |
dendritic cell | 2.20e-13 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.93e-23 | 76 |
bone element | 3.15e-21 | 82 |
skeletal element | 2.79e-19 | 90 |
immune system | 1.24e-18 | 93 |
hematopoietic system | 1.21e-17 | 98 |
blood island | 1.21e-17 | 98 |
skeletal system | 2.82e-17 | 100 |
hemolymphoid system | 6.16e-16 | 108 |
musculoskeletal system | 5.72e-10 | 167 |
lateral plate mesoderm | 5.23e-08 | 203 |