FFCP PHASE1:Hg19::chr11:67201419..67201430,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6199 | |EntrezGene=6199 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10437 | |HGNC=10437 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_ENST00000531765_5end | |association_with_transcript=-33bp_to_ENST00000531765_5end | ||
|cluster_id=chr11:67201419..67201430,+ | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_6_at_RPS6KB2_5end | |description=CAGE_peak_6_at_RPS6KB2_5end | ||
|id=chr11:67201419..67201430,+ | |id=chr11:67201419..67201430,+ | ||
|ontology_enrichment_celltype=CL:0000039!4.27e-88!7;CL:0000586!4.27e-88!7 | |ontology_enrichment_celltype=CL:0000039!4.27e-88!7;CL:0000586!4.27e-88!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;8.52e-64;7!CL:0000586;8.52e-64;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.52e-64,7;CL:0000586,8.52e-64,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.85e-45;10!UBERON:0005564;4.85e-45;10 | |||
|ontology_enrichment_disease=DOID:3095!2.08e-28!22;DOID:2994!2.08e-28!22;DOID:0050687!1.66e-08!143 | |ontology_enrichment_disease=DOID:3095!2.08e-28!22;DOID:2994!2.08e-28!22;DOID:0050687!1.66e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.27e-21;22!DOID:2994;4.27e-21;22!DOID:1325;2.18e-08;7!DOID:3904;2.18e-08;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.27e-21,22;DOID:2994,4.27e-21,22;DOID:1325,2.18e-08,7;DOID:3904,2.18e-08,7;DOID:305,2.62e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.02e-28!8;UBERON:0003135!4.06e-21!11;UBERON:0000991!2.03e-11!21;UBERON:0009196!2.03e-11!21;UBERON:0009117!2.03e-11!21;UBERON:0005564!2.03e-11!21;UBERON:0004176!6.26e-11!22;UBERON:0003101!6.26e-11!22;UBERON:0000079!6.26e-11!22;UBERON:0001052!1.92e-07!4 | |ontology_enrichment_uberon=UBERON:0000473!1.02e-28!8;UBERON:0003135!4.06e-21!11;UBERON:0000991!2.03e-11!21;UBERON:0009196!2.03e-11!21;UBERON:0009117!2.03e-11!21;UBERON:0005564!2.03e-11!21;UBERON:0004176!6.26e-11!22;UBERON:0003101!6.26e-11!22;UBERON:0000079!6.26e-11!22;UBERON:0001052!1.92e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.52e-56;8!UBERON:0003135;4.67e-41;11!UBERON:0000991;4.76e-22;21!UBERON:0003101;4.27e-21;22!UBERON:0000079;4.27e-21;22!UBERON:0002323;9.94e-11;45!UBERON:0003133;6.31e-10;44!UBERON:0000922;1.23e-08;49!UBERON:0002553;2.45e-07;52!UBERON:0005156;2.80e-07;59!UBERON:0000990;2.80e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.52e-56,8;UBERON:0003135,4.67e-41,11;UBERON:0000991,4.76e-22,21;UBERON:0009196,4.76e-22,21;UBERON:0009117,4.76e-22,21;UBERON:0005564,4.76e-22,21;UBERON:0004176,4.27e-21,22;UBERON:0003101,4.27e-21,22;UBERON:0000079,4.27e-21,22;UBERON:0002323,1.35e-10,46;UBERON:0003133,3.42e-10,48;UBERON:0004458,5.30e-10,49;UBERON:0003886,3.71e-09,54;UBERON:0005156,1.88e-08,59;UBERON:0000990,1.88e-08,59;UBERON:0002553,3.34e-08,61 | |||
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|short_description=p6@RPS6KB2 | |short_description=p6@RPS6KB2 | ||
}} | }} |
Latest revision as of 18:08, 19 September 2015
Short description: | p6@RPS6KB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RPS6KB2_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -33bp_to_ENST00000531765_5end |
EntrezGene: | RPS6KB2 |
HGNC: | 10437 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.52e-64 | 7 |
germ cell | 8.52e-64 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.52e-56 | 8 |
male reproductive organ | 4.67e-41 | 11 |
gonad | 4.76e-22 | 21 |
indifferent external genitalia | 4.76e-22 | 21 |
indifferent gonad | 4.76e-22 | 21 |
gonad primordium | 4.76e-22 | 21 |
external genitalia | 4.27e-21 | 22 |
male organism | 4.27e-21 | 22 |
male reproductive system | 4.27e-21 | 22 |
body cavity | 1.35e-10 | 46 |
reproductive organ | 3.42e-10 | 48 |
body cavity or lining | 5.30e-10 | 49 |
body cavity precursor | 3.71e-09 | 54 |
reproductive structure | 1.88e-08 | 59 |
reproductive system | 1.88e-08 | 59 |
anatomical cavity | 3.34e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.27e-21 | 22 |
germ cell cancer | 4.27e-21 | 22 |
bronchus cancer | 2.18e-08 | 7 |
bronchogenic carcinoma | 2.18e-08 | 7 |
carcinoma | 2.62e-08 | 106 |