FFCP PHASE1:Hg19::chr17:79826055..79826064,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:79826055..79826064,-
|short_description=p23@ARHGDIA
|description=CAGE_peak_23_at_ARHGDIA_5end
|association_with_transcript=434bp_to_BC007630_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=396 | |EntrezGene=396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=678 | |HGNC=678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=434bp_to_BC007630_5end | |||
|cluster_id=chr17:79826055..79826064,- | |||
|description=CAGE_peak_23_at_ARHGDIA_5end | |||
|id=chr17:79826055..79826064,- | |||
|ontology_enrichment_celltype=CL:0002371!3.75e-12!591;CL:0000144!4.94e-12!625;CL:0000548!1.05e-10!679;CL:0000004!1.05e-10!679;CL:0000255!1.05e-10!679;CL:0000012!4.97e-10!682;CL:0000055!1.21e-09!180;CL:0000057!7.10e-07!75;CL:0000003!7.59e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0002595;1.67e-08;5!CL:0000135;1.07e-07;3!CL:0000388;1.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.20e-08,5;CL:0000135,1.92e-08,3;CL:0000388,1.92e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.09e-08;3!DOID:127;4.09e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.53e-08,3;DOID:127,1.53e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;3.64e-13;7!UBERON:0003834;1.67e-08;5!UBERON:0001533;1.67e-08;5!UBERON:0007846;1.07e-07;3!UBERON:0000043;1.07e-07;3!UBERON:0007845;1.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,2.04e-13,7;UBERON:0007500,3.11e-10,59;UBERON:0001981,3.11e-10,59;UBERON:0004537,3.11e-10,59;UBERON:0006965,3.11e-10,59;UBERON:0000055,2.57e-09,68;UBERON:0003834,1.20e-08,5;UBERON:0001533,1.20e-08,5;UBERON:0007846,1.92e-08,3;UBERON:0000043,1.92e-08,3;UBERON:0007845,1.92e-08,3;UBERON:0002049,2.17e-08,78;UBERON:0007798,2.17e-08,78;UBERON:0001637,3.32e-08,42;UBERON:0003509,3.32e-08,42;UBERON:0004572,3.32e-08,42;UBERON:0004872,9.50e-08,83;UBERON:0003914,8.91e-07,117 | |||
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| ||
|short_description=p23@ARHGDIA | |||
}} | }} |
Latest revision as of 08:50, 18 September 2015
Short description: | p23@ARHGDIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_ARHGDIA_5end |
Coexpression cluster: | NA |
Association with transcript: | 434bp_to_BC007630_5end |
EntrezGene: | ARHGDIA |
HGNC: | 678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.20e-08 | 5 |
fibrocyte | 1.92e-08 | 3 |
tendon cell | 1.92e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 2.04e-13 | 7 |
epithelial tube open at both ends | 3.11e-10 | 59 |
blood vessel | 3.11e-10 | 59 |
blood vasculature | 3.11e-10 | 59 |
vascular cord | 3.11e-10 | 59 |
vessel | 2.57e-09 | 68 |
thoracic segment blood vessel | 1.20e-08 | 5 |
subclavian artery | 1.20e-08 | 5 |
dense regular connective tissue | 1.92e-08 | 3 |
tendon | 1.92e-08 | 3 |
regular connective tissue | 1.92e-08 | 3 |
vasculature | 2.17e-08 | 78 |
vascular system | 2.17e-08 | 78 |
artery | 3.32e-08 | 42 |
arterial blood vessel | 3.32e-08 | 42 |
arterial system | 3.32e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 9.50e-08 | 83 |
epithelial tube | 8.91e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.53e-08 | 3 |
leiomyoma | 1.53e-08 | 3 |