FFCP PHASE1:Hg19::chr11:60896040..60896043,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:60896040..60896043,+ | |||
|coexpression_cluster_id=C736 | |coexpression_cluster_id=C736 | ||
|description=CAGE_peak_at_chr11:60896040..60896043,+ | |description=CAGE_peak_at_chr11:60896040..60896043,+ | ||
|id=chr11:60896040..60896043,+ | |id=chr11:60896040..60896043,+ | ||
|ontology_enrichment_celltype=CL:0000623!1.26e-22!3;CL:0000825!1.26e-22!3;CL:0000624!9.98e-20!6;CL:0000791!4.13e-19!18;CL:0000789!4.13e-19!18;CL:0002420!4.13e-19!18;CL:0002419!4.13e-19!18;CL:0000790!4.13e-19!18;CL:0000084!1.57e-17!25;CL:0000827!1.57e-17!25;CL:0000838!5.34e-15!52;CL:0000542!1.12e-14!53;CL:0000051!1.12e-14!53;CL:0002087!2.22e-12!119;CL:0000738!1.42e-11!140;CL:0000842!1.41e-10!3;CL:0000037!7.92e-09!172;CL:0000566!7.92e-09!172;CL:0002031!9.96e-09!124;CL:0000988!3.62e-08!182;CL:0000224!3.80e-08!4;CL:0002393!8.53e-08!9;CL:0002397!8.53e-08!9 | |ontology_enrichment_celltype=CL:0000623!1.26e-22!3;CL:0000825!1.26e-22!3;CL:0000624!9.98e-20!6;CL:0000791!4.13e-19!18;CL:0000789!4.13e-19!18;CL:0002420!4.13e-19!18;CL:0002419!4.13e-19!18;CL:0000790!4.13e-19!18;CL:0000084!1.57e-17!25;CL:0000827!1.57e-17!25;CL:0000838!5.34e-15!52;CL:0000542!1.12e-14!53;CL:0000051!1.12e-14!53;CL:0002087!2.22e-12!119;CL:0000738!1.42e-11!140;CL:0000842!1.41e-10!3;CL:0000037!7.92e-09!172;CL:0000566!7.92e-09!172;CL:0002031!9.96e-09!124;CL:0000988!3.62e-08!182;CL:0000224!3.80e-08!4;CL:0002393!8.53e-08!9;CL:0002397!8.53e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000623;3.66e-23;3!CL:0000791;8.72e-16;18!CL:0000789;8.72e-16;18!CL:0002419;8.72e-16;18!CL:0000624;2.59e-12;6!CL:0000084;1.06e-11;25!CL:0000625;2.32e-07;11!CL:0000542;4.82e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.09e-23,3;CL:0000825,4.09e-23,3;CL:0000791,8.40e-16,18;CL:0000789,8.40e-16,18;CL:0002420,8.40e-16,18;CL:0002419,8.40e-16,18;CL:0000790,8.40e-16,18;CL:0000838,1.77e-12,52;CL:0000624,2.45e-12,6;CL:0000542,2.91e-12,53;CL:0000051,2.91e-12,53;CL:0000084,1.03e-11,25;CL:0000827,1.03e-11,25;CL:0000625,2.32e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;8.72e-16;18!CL:0000051;4.82e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!9.51e-08!4;UBERON:0005058!9.51e-08!4;UBERON:0009113!9.51e-08!4;UBERON:0003295!9.51e-08!4;UBERON:0005562!9.51e-08!4 | |ontology_enrichment_uberon=UBERON:0002370!9.51e-08!4;UBERON:0005058!9.51e-08!4;UBERON:0009113!9.51e-08!4;UBERON:0003295!9.51e-08!4;UBERON:0005562!9.51e-08!4 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr11:60896040..60896043,+ | |short_description=p@chr11:60896040..60896043,+ | ||
}} | }} |
Latest revision as of 23:21, 23 July 2015
Short description: | p@chr11:60896040..60896043, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60896040..60896043, + |
Coexpression cluster: | C736_CD4_CD8_Natural_Neutrophils_Peripheral_Hepatocyte_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 4.09e-23 | 3 |
pro-NK cell | 4.09e-23 | 3 |
mature alpha-beta T cell | 8.40e-16 | 18 |
alpha-beta T cell | 8.40e-16 | 18 |
immature T cell | 8.40e-16 | 18 |
mature T cell | 8.40e-16 | 18 |
immature alpha-beta T cell | 8.40e-16 | 18 |
lymphoid lineage restricted progenitor cell | 1.77e-12 | 52 |
CD4-positive, alpha-beta T cell | 2.45e-12 | 6 |
lymphocyte | 2.91e-12 | 53 |
common lymphoid progenitor | 2.91e-12 | 53 |
T cell | 1.03e-11 | 25 |
pro-T cell | 1.03e-11 | 25 |
CD8-positive, alpha-beta T cell | 2.32e-07 | 11 |