FFCP PHASE1:Hg19::chr11:5064816..5064825,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:5064816..5064825,+ | |||
|coexpression_cluster_id=C139 | |coexpression_cluster_id=C139 | ||
|description=CAGE_peak_at_chr11:5064816..5064825,+ | |description=CAGE_peak_at_chr11:5064816..5064825,+ | ||
|id=chr11:5064816..5064825,+ | |id=chr11:5064816..5064825,+ | ||
|ontology_enrichment_celltype=CL:0000080!8.33e-10!6;CL:0002573!2.03e-08!2;CL:0000313!9.73e-07!1 | |ontology_enrichment_celltype=CL:0000080!8.33e-10!6;CL:0002573!2.03e-08!2;CL:0000313!9.73e-07!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2152!9.73e-07!1 | |ontology_enrichment_disease=DOID:2152!9.73e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!3.60e-46!22;UBERON:0001950!7.15e-44!20;UBERON:0001869!3.98e-41!32;UBERON:0000956!1.64e-40!25;UBERON:0000203!1.64e-40!25;UBERON:0001893!1.39e-38!34;UBERON:0002791!8.07e-35!33;UBERON:0002020!9.81e-34!34;UBERON:0003528!9.81e-34!34;UBERON:0002780!1.37e-31!41;UBERON:0001890!1.37e-31!41;UBERON:0006240!1.37e-31!41;UBERON:0003080!8.92e-31!42;UBERON:0001871!5.93e-26!7;UBERON:0000200!2.08e-24!6;UBERON:0003056!4.91e-23!61;UBERON:0000955!1.94e-22!69;UBERON:0006238!1.94e-22!69;UBERON:0001049!6.11e-22!57;UBERON:0005068!6.11e-22!57;UBERON:0006241!6.11e-22!57;UBERON:0007135!6.11e-22!57;UBERON:0000073!1.17e-21!94;UBERON:0001016!1.17e-21!94;UBERON:0002616!4.27e-21!59;UBERON:0001017!1.05e-20!82;UBERON:0005743!1.40e-19!86;UBERON:0001872!5.58e-19!5;UBERON:0002771!1.10e-18!3;UBERON:0000349!2.42e-18!5;UBERON:0003075!1.79e-17!86;UBERON:0007284!1.79e-17!86;UBERON:0002346!1.55e-16!90;UBERON:0000033!7.80e-16!123;UBERON:0007023!9.35e-16!115;UBERON:0000153!6.63e-15!129;UBERON:0007811!6.63e-15!129;UBERON:0001876!1.28e-12!2;UBERON:0004121!1.75e-11!169;UBERON:0000924!4.06e-11!173;UBERON:0006601!4.06e-11!173;UBERON:0003112!3.20e-07!1;UBERON:0000032!3.20e-07!1;UBERON:0005253!3.20e-07!1;UBERON:0003128!3.20e-07!1;UBERON:0002241!3.20e-07!1;UBERON:0001703!3.20e-07!1;UBERON:0004761!3.20e-07!1;UBERON:0009617!3.20e-07!1;UBERON:0007190!3.82e-07!1;UBERON:0002022!5.14e-07!1;UBERON:0002581!6.12e-07!1;UBERON:0001882!8.18e-07!1;UBERON:0005403!8.18e-07!1;UBERON:0004911!9.73e-07!1 | |ontology_enrichment_uberon=UBERON:0002619!3.60e-46!22;UBERON:0001950!7.15e-44!20;UBERON:0001869!3.98e-41!32;UBERON:0000956!1.64e-40!25;UBERON:0000203!1.64e-40!25;UBERON:0001893!1.39e-38!34;UBERON:0002791!8.07e-35!33;UBERON:0002020!9.81e-34!34;UBERON:0003528!9.81e-34!34;UBERON:0002780!1.37e-31!41;UBERON:0001890!1.37e-31!41;UBERON:0006240!1.37e-31!41;UBERON:0003080!8.92e-31!42;UBERON:0001871!5.93e-26!7;UBERON:0000200!2.08e-24!6;UBERON:0003056!4.91e-23!61;UBERON:0000955!1.94e-22!69;UBERON:0006238!1.94e-22!69;UBERON:0001049!6.11e-22!57;UBERON:0005068!6.11e-22!57;UBERON:0006241!6.11e-22!57;UBERON:0007135!6.11e-22!57;UBERON:0000073!1.17e-21!94;UBERON:0001016!1.17e-21!94;UBERON:0002616!4.27e-21!59;UBERON:0001017!1.05e-20!82;UBERON:0005743!1.40e-19!86;UBERON:0001872!5.58e-19!5;UBERON:0002771!1.10e-18!3;UBERON:0000349!2.42e-18!5;UBERON:0003075!1.79e-17!86;UBERON:0007284!1.79e-17!86;UBERON:0002346!1.55e-16!90;UBERON:0000033!7.80e-16!123;UBERON:0007023!9.35e-16!115;UBERON:0000153!6.63e-15!129;UBERON:0007811!6.63e-15!129;UBERON:0001876!1.28e-12!2;UBERON:0004121!1.75e-11!169;UBERON:0000924!4.06e-11!173;UBERON:0006601!4.06e-11!173;UBERON:0003112!3.20e-07!1;UBERON:0000032!3.20e-07!1;UBERON:0005253!3.20e-07!1;UBERON:0003128!3.20e-07!1;UBERON:0002241!3.20e-07!1;UBERON:0001703!3.20e-07!1;UBERON:0004761!3.20e-07!1;UBERON:0009617!3.20e-07!1;UBERON:0007190!3.82e-07!1;UBERON:0002022!5.14e-07!1;UBERON:0002581!6.12e-07!1;UBERON:0001882!8.18e-07!1;UBERON:0005403!8.18e-07!1;UBERON:0004911!9.73e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.27e-30;10!UBERON:0000178;1.47e-20;15!UBERON:0000179;1.47e-20;15!UBERON:0000463;1.47e-20;15!UBERON:0002702;1.27e-17;2!UBERON:0000478;3.63e-13;24!UBERON:0001870;3.24e-12;3!UBERON:0002390;3.71e-10;32!UBERON:0000200;9.49e-07;6!UBERON:0000922;9.95e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.27e-30,10;UBERON:0000358,2.27e-30,10;UBERON:0000307,2.27e-30,10;UBERON:0000091,2.27e-30,10;UBERON:0000087,2.27e-30,10;UBERON:0007010,2.27e-30,10;UBERON:0007806,2.27e-30,10;UBERON:0008780,2.27e-30,10;UBERON:0005728,2.27e-30,10;UBERON:0000178,1.47e-20,15;UBERON:0000179,1.47e-20,15;UBERON:0000463,1.47e-20,15;UBERON:0002702,1.27e-17,2;UBERON:0000478,3.63e-13,24;UBERON:0001870,3.24e-12,3;UBERON:0000200,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0.222617410045812,0,0,0,0,0,6.44292699763575,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.8199859596543,3.21266241260907,2.08843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,1.1267183763585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0.781078098613847,0.413373593002368,0.697573912132975,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0.197318320688547,0,0,0,0,0,0,2.15927591218621,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0.222617410045812,0,0,0,0,0,6.44292699763575,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.8199859596543,3.21266241260907,2.08843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,1.1267183763585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0.781078098613847,0.413373593002368,0.697573912132975,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0.197318320688547,0,0,0,0,0,0,2.15927591218621,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:5064816..5064825,+ | |short_description=p@chr11:5064816..5064825,+ | ||
}} | }} |
Latest revision as of 22:47, 23 July 2015
Short description: | p@chr11:5064816..5064825, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:5064816..5064825, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.27e-30 | 10 |
blastocyst | 2.27e-30 | 10 |
blastula | 2.27e-30 | 10 |
bilaminar disc | 2.27e-30 | 10 |
inner cell mass | 2.27e-30 | 10 |
cleaving embryo | 2.27e-30 | 10 |
connecting stalk | 2.27e-30 | 10 |
inner cell mass derived epiblast | 2.27e-30 | 10 |
extraembryonic mesoderm | 2.27e-30 | 10 |
blood | 1.47e-20 | 15 |
haemolymphatic fluid | 1.47e-20 | 15 |
organism substance | 1.47e-20 | 15 |
middle frontal gyrus | 1.27e-17 | 2 |
extraembryonic structure | 3.63e-13 | 24 |
frontal cortex | 3.24e-12 | 3 |
gyrus | 9.49e-07 | 6 |