FFCP PHASE1:Hg19::chr11:32449555..32449601,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:32449555..32449601,- | |||
|coexpression_cluster_id=C337 | |coexpression_cluster_id=C337 | ||
|description=CAGE_peak_at_chr11:32449555..32449601,- | |description=CAGE_peak_at_chr11:32449555..32449601,- | ||
|id=chr11:32449555..32449601,- | |id=chr11:32449555..32449601,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000650;3.18e-11;2!CL:1000500;3.18e-11;2!CL:1000618;3.18e-11;2!CL:1001318;3.18e-11;2!CL:0002173;3.18e-11;2!CL:0000746;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,4.52e-11,2;CL:1000500,4.52e-11,2;CL:1000618,4.52e-11,2;CL:1001318,4.52e-11,2;CL:0002173,4.52e-11,2;CL:0000746,6.78e-08,3;CL:0000513,6.78e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.10e-18;10!UBERON:0005564;1.10e-18;10!CL:0000513;6.56e-08;3 | |||
|ontology_enrichment_disease=DOID:2394!3.03e-10!14;DOID:0060084!6.96e-09!3;DOID:127!6.96e-09!3;DOID:8692!2.94e-07!31;DOID:0060072!9.91e-07!4 | |ontology_enrichment_disease=DOID:2394!3.03e-10!14;DOID:0060084!6.96e-09!3;DOID:127!6.96e-09!3;DOID:8692!2.94e-07!31;DOID:0060072!9.91e-07!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!4.22e-15!59;UBERON:0000990!4.22e-15!59;UBERON:0003133!1.21e-14!48;UBERON:0003134!7.25e-14!37;UBERON:0000474!7.25e-14!37;UBERON:0003100!4.18e-12!41;UBERON:0000992!4.07e-11!13;UBERON:0000991!2.64e-10!21;UBERON:0009196!2.64e-10!21;UBERON:0009117!2.64e-10!21;UBERON:0005564!2.64e-10!21;UBERON:0004176!9.76e-10!22;UBERON:0003886!1.61e-09!63;UBERON:0005795!3.27e-08!22;UBERON:0002553!4.19e-08!70;UBERON:0004175!6.16e-07!25;UBERON:0004458!7.82e-07!49;UBERON:0000995!8.05e-07!21 | |ontology_enrichment_uberon=UBERON:0005156!4.22e-15!59;UBERON:0000990!4.22e-15!59;UBERON:0003133!1.21e-14!48;UBERON:0003134!7.25e-14!37;UBERON:0000474!7.25e-14!37;UBERON:0003100!4.18e-12!41;UBERON:0000992!4.07e-11!13;UBERON:0000991!2.64e-10!21;UBERON:0009196!2.64e-10!21;UBERON:0009117!2.64e-10!21;UBERON:0005564!2.64e-10!21;UBERON:0004176!9.76e-10!22;UBERON:0003886!1.61e-09!63;UBERON:0005795!3.27e-08!22;UBERON:0002553!4.19e-08!70;UBERON:0004175!6.16e-07!25;UBERON:0004458!7.82e-07!49;UBERON:0000995!8.05e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0006834;4.66e-21;1!UBERON:0003567;3.18e-11;2!UBERON:0003838;3.18e-11;2!UBERON:0003586;3.18e-11;2!UBERON:0005169;3.18e-11;2!UBERON:0002321;3.18e-11;2!UBERON:0005215;3.18e-11;2!UBERON:0002303;3.18e-11;2!UBERON:0002319;3.18e-11;2!UBERON:0000473;5.55e-11;8!UBERON:0000991;3.04e-09;21!UBERON:0003133;2.55e-08;44!UBERON:0003135;3.08e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,4.22e-21,1;UBERON:0003567,4.52e-11,2;UBERON:0003838,4.52e-11,2;UBERON:0003586,4.52e-11,2;UBERON:0005169,4.52e-11,2;UBERON:0002321,4.52e-11,2;UBERON:0005215,4.52e-11,2;UBERON:0002303,4.52e-11,2;UBERON:0002319,4.52e-11,2;UBERON:0000473,4.66e-11,8;UBERON:0003133,1.54e-10,48;UBERON:0000991,2.75e-09,21;UBERON:0009196,2.75e-09,21;UBERON:0009117,2.75e-09,21;UBERON:0005564,2.75e-09,21;UBERON:0004176,6.84e-09,22;UBERON:0005156,1.37e-08,59;UBERON:0000990,1.37e-08,59;UBERON:0003135,2.72e-08,11 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,1.59956785891291,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313359791546046,0,0.169291777801603,0,0,0,0.687010689511529,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815439456455,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0,0.19606253431774,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.681909645754975,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.653174720218818,1.19730191562487,0.164185041498678,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0.621051827505038,0.414706207840855,0,0,0.150257608997218,1.52322084867518,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.530067437837643,0.964570191354574,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83572674581212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.939839179798536,0.580120991762195,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,6.82008283964155,1.87574891109325,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0.106727345877715,0,0,0,1.34465588601153,0.813792356631477,0,0.201273793591026,0 | ||
|short_description=p@chr11:32449555..32449601,- | |short_description=p@chr11:32449555..32449601,- | ||
}} | }} |
Latest revision as of 21:33, 23 July 2015
Short description: | p@chr11:32449555..32449601, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:32449555..32449601, - |
Coexpression cluster: | C337_ovary_testis_Adipocyte_mesothelioma_chorionic_placenta_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 4.52e-11 | 2 |
kidney interstitial cell | 4.52e-11 | 2 |
juxtaglomerular complex cell | 4.52e-11 | 2 |
renal interstitial pericyte | 4.52e-11 | 2 |
extraglomerular mesangial cell | 4.52e-11 | 2 |
cardiac muscle cell | 6.78e-08 | 3 |
cardiac muscle myoblast | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 4.22e-21 | 1 |
abdomen connective tissue | 4.52e-11 | 2 |
abdominal segment connective tissue | 4.52e-11 | 2 |
trunk connective tissue | 4.52e-11 | 2 |
interstitial tissue | 4.52e-11 | 2 |
extraglomerular mesangium | 4.52e-11 | 2 |
kidney interstitium | 4.52e-11 | 2 |
juxtaglomerular apparatus | 4.52e-11 | 2 |
mesangium | 4.52e-11 | 2 |
testis | 4.66e-11 | 8 |
reproductive organ | 1.54e-10 | 48 |
gonad | 2.75e-09 | 21 |
indifferent external genitalia | 2.75e-09 | 21 |
indifferent gonad | 2.75e-09 | 21 |
gonad primordium | 2.75e-09 | 21 |
external genitalia | 6.84e-09 | 22 |
reproductive structure | 1.37e-08 | 59 |
reproductive system | 1.37e-08 | 59 |
male reproductive organ | 2.72e-08 | 11 |