FFCP PHASE1:Hg19::chr11:20070772..20070780,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=40743 | |HGNC=40743 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=68bp_to_ENST00000533767_5end | |association_with_transcript=68bp_to_ENST00000533767_5end | ||
|cluster_id=chr11:20070772..20070780,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_4_at_NAV2-AS2_5end | |description=CAGE_peak_4_at_NAV2-AS2_5end | ||
|id=chr11:20070772..20070780,- | |id=chr11:20070772..20070780,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.99e-50;1!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4!UBERON:0004872;2.18e-08;7 | |||
|ontology_enrichment_disease=DOID:114!1.26e-17!2;DOID:178!1.56e-09!1;DOID:326!1.56e-09!1;DOID:3978!1.56e-09!1;DOID:3394!1.56e-09!1;DOID:5844!1.56e-09!1;DOID:1287!2.89e-09!4 | |ontology_enrichment_disease=DOID:114!1.26e-17!2;DOID:178!1.56e-09!1;DOID:326!1.56e-09!1;DOID:3978!1.56e-09!1;DOID:3394!1.56e-09!1;DOID:5844!1.56e-09!1;DOID:1287!2.89e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:114;4.32e-26;2!DOID:1287;8.81e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.32e-26,2;DOID:1287,8.82e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.27e-18!27;UBERON:0007023!5.31e-17!115;UBERON:0000200!3.25e-12!6;UBERON:0003978!4.60e-12!3;UBERON:0009751!4.60e-12!3;UBERON:0000946!4.60e-12!3;UBERON:0002523!4.60e-12!3;UBERON:0005983!4.60e-12!3;UBERON:0002165!4.60e-12!3;UBERON:0002062!4.60e-12!3;UBERON:0007280!4.60e-12!3;UBERON:0004151!4.86e-12!3;UBERON:0002146!9.44e-10!1;UBERON:0005623!9.44e-10!1;UBERON:0002079!1.12e-09!1;UBERON:0002084!1.21e-09!1;UBERON:0002082!1.21e-09!1;UBERON:0004706!1.21e-09!1;UBERON:0002135!1.32e-09!1;UBERON:0006834!3.25e-09!1;UBERON:0007190!4.50e-09!1;UBERON:0002581!4.87e-09!1;UBERON:0001882!5.28e-09!1;UBERON:0005403!5.28e-09!1;UBERON:0000948!1.63e-08!24;UBERON:0005498!1.63e-08!24;UBERON:0004140!1.63e-08!24;UBERON:0009881!1.63e-08!24;UBERON:0004141!1.63e-08!24;UBERON:0003084!1.63e-08!24;UBERON:0007005!1.63e-08!24;UBERON:0004139!1.63e-08!24;UBERON:0004291!1.63e-08!24;UBERON:0003103!2.51e-08!69;UBERON:0001869!5.71e-08!32;UBERON:0001893!1.73e-07!34 | |ontology_enrichment_uberon=UBERON:0007100!1.27e-18!27;UBERON:0007023!5.31e-17!115;UBERON:0000200!3.25e-12!6;UBERON:0003978!4.60e-12!3;UBERON:0009751!4.60e-12!3;UBERON:0000946!4.60e-12!3;UBERON:0002523!4.60e-12!3;UBERON:0005983!4.60e-12!3;UBERON:0002165!4.60e-12!3;UBERON:0002062!4.60e-12!3;UBERON:0007280!4.60e-12!3;UBERON:0004151!4.86e-12!3;UBERON:0002146!9.44e-10!1;UBERON:0005623!9.44e-10!1;UBERON:0002079!1.12e-09!1;UBERON:0002084!1.21e-09!1;UBERON:0002082!1.21e-09!1;UBERON:0004706!1.21e-09!1;UBERON:0002135!1.32e-09!1;UBERON:0006834!3.25e-09!1;UBERON:0007190!4.50e-09!1;UBERON:0002581!4.87e-09!1;UBERON:0001882!5.28e-09!1;UBERON:0005403!5.28e-09!1;UBERON:0000948!1.63e-08!24;UBERON:0005498!1.63e-08!24;UBERON:0004140!1.63e-08!24;UBERON:0009881!1.63e-08!24;UBERON:0004141!1.63e-08!24;UBERON:0003084!1.63e-08!24;UBERON:0007005!1.63e-08!24;UBERON:0004139!1.63e-08!24;UBERON:0004291!1.63e-08!24;UBERON:0003103!2.51e-08!69;UBERON:0001869!5.71e-08!32;UBERON:0001893!1.73e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002146;3.99e-50;1!UBERON:0005623;3.99e-50;1!UBERON:0007100;2.66e-32;25!UBERON:0003978;9.45e-18;3!UBERON:0000946;9.45e-18;3!UBERON:0003103;4.48e-10;61!UBERON:0000948;4.74e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,3.99e-50,1;UBERON:0005623,3.99e-50,1;UBERON:0007100,5.44e-30,27;UBERON:0003978,9.46e-18,3;UBERON:0009751,9.46e-18,3;UBERON:0000946,9.46e-18,3;UBERON:0002523,9.46e-18,3;UBERON:0005983,9.46e-18,3;UBERON:0002165,9.46e-18,3;UBERON:0002062,9.46e-18,3;UBERON:0007280,9.46e-18,3;UBERON:0003103,1.71e-12,68;UBERON:0000948,2.56e-09,24;UBERON:0005498,2.56e-09,24;UBERON:0004140,2.56e-09,24;UBERON:0009881,2.56e-09,24;UBERON:0004141,2.56e-09,24;UBERON:0003084,2.56e-09,24;UBERON:0007005,2.56e-09,24;UBERON:0004139,2.56e-09,24;UBERON:0004291,2.56e-09,24;UBERON:0004797,2.18e-08,7;UBERON:0001009,6.64e-08,112 | |||
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|short_description=p4@NAV2-AS2 | |short_description=p4@NAV2-AS2 | ||
}} | }} |
Latest revision as of 05:49, 17 September 2015
Short description: | p4@NAV2-AS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NAV2-AS2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 68bp_to_ENST00000533767_5end |
EntrezGene: | NA |
HGNC: | 40743 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 3.99e-50 | 1 |
semi-lunar valve | 3.99e-50 | 1 |
primary circulatory organ | 5.44e-30 | 27 |
valve | 9.46e-18 | 3 |
cardiac mesenchyme | 9.46e-18 | 3 |
cardial valve | 9.46e-18 | 3 |
tunica intima | 9.46e-18 | 3 |
heart layer | 9.46e-18 | 3 |
endocardium | 9.46e-18 | 3 |
endocardial cushion | 9.46e-18 | 3 |
presumptive endocardium | 9.46e-18 | 3 |
compound organ | 1.71e-12 | 68 |
heart | 2.56e-09 | 24 |
primitive heart tube | 2.56e-09 | 24 |
primary heart field | 2.56e-09 | 24 |
anterior lateral plate mesoderm | 2.56e-09 | 24 |
heart tube | 2.56e-09 | 24 |
heart primordium | 2.56e-09 | 24 |
cardiac mesoderm | 2.56e-09 | 24 |
cardiogenic plate | 2.56e-09 | 24 |
heart rudiment | 2.56e-09 | 24 |
blood vessel layer | 2.18e-08 | 7 |
circulatory system | 6.64e-08 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.32e-26 | 2 |
cardiovascular system disease | 8.82e-14 | 4 |