FFCP PHASE1:Hg19::chr11:117074100..117074165,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:117074100..117074165,+ | |||
|coexpression_cluster_id=C493 | |coexpression_cluster_id=C493 | ||
|description=CAGE_peak_at_chr11:117074100..117074165,+ | |description=CAGE_peak_at_chr11:117074100..117074165,+ | ||
|id=chr11:117074100..117074165,+ | |id=chr11:117074100..117074165,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.06e-26!180;CL:0000680!9.64e-17!57;CL:0000056!9.64e-17!57;CL:0000355!9.64e-17!57;CL:0000393!8.59e-16!60;CL:0000211!8.59e-16!60;CL:0000192!9.27e-16!42;CL:0000514!9.27e-16!42;CL:0000187!1.11e-15!54;CL:0000183!1.46e-15!59;CL:0000359!3.41e-14!32;CL:0000057!6.02e-12!75;CL:0000222!4.15e-09!119 | |ontology_enrichment_celltype=CL:0000055!1.06e-26!180;CL:0000680!9.64e-17!57;CL:0000056!9.64e-17!57;CL:0000355!9.64e-17!57;CL:0000393!8.59e-16!60;CL:0000211!8.59e-16!60;CL:0000192!9.27e-16!42;CL:0000514!9.27e-16!42;CL:0000187!1.11e-15!54;CL:0000183!1.46e-15!59;CL:0000359!3.41e-14!32;CL:0000057!6.02e-12!75;CL:0000222!4.15e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.28e-14;32!CL:0000192;1.07e-12;43!CL:0000187;2.08e-08;55!CL:0000393;1.26e-07;61!CL:0000211;1.26e-07;61!CL:0002334;1.55e-07;12!CL:0000134;5.55e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.55e-17,43;CL:0000514,2.55e-17,43;CL:0000680,3.44e-16,58;CL:0000056,3.44e-16,58;CL:0000355,3.44e-16,58;CL:0000359,2.17e-15,32;CL:0000187,5.74e-15,55;CL:0000393,8.74e-15,61;CL:0000211,8.74e-15,61;CL:0000057,4.55e-13,76;CL:0000222,1.11e-07,121;CL:0002334,1.36e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;1.07e-12;43!CL:0000355;2.66e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;6.35e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.81e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.07e-16!63;UBERON:0001015!1.07e-16!63;UBERON:0000383!1.07e-16!63;UBERON:0005256!2.76e-16!143;UBERON:0000914!3.55e-16!83;UBERON:0002329!3.55e-16!83;UBERON:0003077!3.55e-16!83;UBERON:0003059!3.55e-16!83;UBERON:0007282!3.55e-16!83;UBERON:0009618!3.55e-16!83;UBERON:0007285!3.55e-16!83;UBERON:0001134!6.34e-16!61;UBERON:0002036!6.34e-16!61;UBERON:0003082!6.34e-16!61;UBERON:0004290!4.14e-15!70;UBERON:0000486!1.12e-13!82;UBERON:0000468!1.21e-12!659;UBERON:0004872!3.93e-12!84;UBERON:0002100!2.82e-11!216;UBERON:0001637!1.57e-10!42;UBERON:0003509!1.57e-10!42;UBERON:0004572!1.57e-10!42;UBERON:0003914!5.05e-10!118;UBERON:0003104!7.76e-10!238;UBERON:0009142!7.76e-10!238;UBERON:0000481!2.22e-09!347;UBERON:0002049!2.54e-09!79;UBERON:0007798!2.54e-09!79;UBERON:0000475!5.83e-09!365;UBERON:0000467!6.99e-09!625;UBERON:0004573!7.40e-09!33;UBERON:0004571!7.40e-09!33;UBERON:0000480!1.05e-08!626;UBERON:0001981!1.19e-08!60;UBERON:0007500!1.19e-08!60;UBERON:0004537!1.19e-08!60;UBERON:0006965!1.19e-08!60;UBERON:0000926!6.47e-08!448;UBERON:0004120!6.47e-08!448;UBERON:0006603!6.47e-08!448;UBERON:0001009!3.16e-07!113;UBERON:0000490!3.47e-07!138;UBERON:0000055!5.00e-07!69;UBERON:0007100!5.03e-07!27;UBERON:0004535!5.18e-07!110;UBERON:0000948!5.75e-07!24;UBERON:0005498!5.75e-07!24;UBERON:0004140!5.75e-07!24;UBERON:0009881!5.75e-07!24;UBERON:0004141!5.75e-07!24;UBERON:0003084!5.75e-07!24;UBERON:0007005!5.75e-07!24;UBERON:0004139!5.75e-07!24;UBERON:0004291!5.75e-07!24;UBERON:0001135!7.08e-07!15;UBERON:0000922!9.54e-07!612 | |ontology_enrichment_uberon=UBERON:0002385!1.07e-16!63;UBERON:0001015!1.07e-16!63;UBERON:0000383!1.07e-16!63;UBERON:0005256!2.76e-16!143;UBERON:0000914!3.55e-16!83;UBERON:0002329!3.55e-16!83;UBERON:0003077!3.55e-16!83;UBERON:0003059!3.55e-16!83;UBERON:0007282!3.55e-16!83;UBERON:0009618!3.55e-16!83;UBERON:0007285!3.55e-16!83;UBERON:0001134!6.34e-16!61;UBERON:0002036!6.34e-16!61;UBERON:0003082!6.34e-16!61;UBERON:0004290!4.14e-15!70;UBERON:0000486!1.12e-13!82;UBERON:0000468!1.21e-12!659;UBERON:0004872!3.93e-12!84;UBERON:0002100!2.82e-11!216;UBERON:0001637!1.57e-10!42;UBERON:0003509!1.57e-10!42;UBERON:0004572!1.57e-10!42;UBERON:0003914!5.05e-10!118;UBERON:0003104!7.76e-10!238;UBERON:0009142!7.76e-10!238;UBERON:0000481!2.22e-09!347;UBERON:0002049!2.54e-09!79;UBERON:0007798!2.54e-09!79;UBERON:0000475!5.83e-09!365;UBERON:0000467!6.99e-09!625;UBERON:0004573!7.40e-09!33;UBERON:0004571!7.40e-09!33;UBERON:0000480!1.05e-08!626;UBERON:0001981!1.19e-08!60;UBERON:0007500!1.19e-08!60;UBERON:0004537!1.19e-08!60;UBERON:0006965!1.19e-08!60;UBERON:0000926!6.47e-08!448;UBERON:0004120!6.47e-08!448;UBERON:0006603!6.47e-08!448;UBERON:0001009!3.16e-07!113;UBERON:0000490!3.47e-07!138;UBERON:0000055!5.00e-07!69;UBERON:0007100!5.03e-07!27;UBERON:0004535!5.18e-07!110;UBERON:0000948!5.75e-07!24;UBERON:0005498!5.75e-07!24;UBERON:0004140!5.75e-07!24;UBERON:0009881!5.75e-07!24;UBERON:0004141!5.75e-07!24;UBERON:0003084!5.75e-07!24;UBERON:0007005!5.75e-07!24;UBERON:0004139!5.75e-07!24;UBERON:0004291!5.75e-07!24;UBERON:0001135!7.08e-07!15;UBERON:0000922!9.54e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.63e-09;33!UBERON:0004571;2.63e-09;33!UBERON:0001637;1.38e-08;42!UBERON:0003509;1.38e-08;42!UBERON:0004572;1.38e-08;42!UBERON:0001135;6.85e-08;15 | |||
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| ||
|short_description=p@chr11:117074100..117074165,+ | |short_description=p@chr11:117074100..117074165,+ | ||
}} | }} |
Latest revision as of 18:33, 23 July 2015
Short description: | p@chr11:117074100..117074165, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:117074100..117074165, + |
Coexpression cluster: | C493_Adipocyte_basal_Mesenchymal_Smooth_mesenchymal_Aortic_Multipotent |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.55e-17 | 43 |
smooth muscle myoblast | 2.55e-17 | 43 |
muscle precursor cell | 3.44e-16 | 58 |
myoblast | 3.44e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.44e-16 | 58 |
vascular associated smooth muscle cell | 2.17e-15 | 32 |
muscle cell | 5.74e-15 | 55 |
electrically responsive cell | 8.74e-15 | 61 |
electrically active cell | 8.74e-15 | 61 |
fibroblast | 4.55e-13 | 76 |
mesodermal cell | 1.11e-07 | 121 |
preadipocyte | 1.36e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.81e-07 | 14 |