FFCP PHASE1:Hg19::chr11:112096777..112096801,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5805 | |EntrezGene=5805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9689 | |HGNC=9689 | ||
|TSSclassifier=strong | |||
|UniProt=Q03393 | |UniProt=Q03393 | ||
|association_with_transcript=-286bp_to_ENST00000280362,NM_000317,uc001pnj.3,uc009yyo.2_5end | |association_with_transcript=-286bp_to_ENST00000280362,NM_000317,uc001pnj.3,uc009yyo.2_5end | ||
|cluster_id=chr11:112096777..112096801,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_2_at_PTS_5end | |description=CAGE_peak_2_at_PTS_5end | ||
|id=chr11:112096777..112096801,+ | |id=chr11:112096777..112096801,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.38e-17!45;CL:0002057!1.59e-15!42;CL:0002009!2.64e-11!65;CL:0000557!7.54e-11!71;CL:0002194!1.99e-10!63;CL:0000576!1.99e-10!63;CL:0000040!1.99e-10!63;CL:0000559!1.99e-10!63;CL:0000766!8.20e-10!76;CL:0000839!1.15e-09!70;CL:0000548!6.02e-08!679;CL:0000004!6.02e-08!679;CL:0000255!6.02e-08!679;CL:0000012!1.30e-07!682;CL:0000063!5.56e-07!578 | |ontology_enrichment_celltype=CL:0000860!1.38e-17!45;CL:0002057!1.59e-15!42;CL:0002009!2.64e-11!65;CL:0000557!7.54e-11!71;CL:0002194!1.99e-10!63;CL:0000576!1.99e-10!63;CL:0000040!1.99e-10!63;CL:0000559!1.99e-10!63;CL:0000766!8.20e-10!76;CL:0000839!1.15e-09!70;CL:0000548!6.02e-08!679;CL:0000004!6.02e-08!679;CL:0000255!6.02e-08!679;CL:0000012!1.30e-07!682;CL:0000063!5.56e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.34e-32;33!CL:0002057;3.34e-32;33!CL:0000473;3.24e-23;39!CL:0000234;3.24e-23;39!CL:0000576;6.81e-19;48!CL:0000766;2.91e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.55e-35,42;CL:0002057,2.55e-35,42;CL:0000473,3.49e-30,48;CL:0000234,3.49e-30,48;CL:0002194,5.28e-23,59;CL:0000576,5.28e-23,59;CL:0000040,5.28e-23,59;CL:0000559,5.28e-23,59;CL:0002009,4.44e-22,61;CL:0000839,5.20e-20,66;CL:0000557,1.24e-19,67;CL:0000766,6.60e-18,72;CL:0000763,3.23e-10,108;CL:0000049,3.23e-10,108;CL:0002087,2.73e-09,115;CL:0002031,1.07e-08,120;CL:0000738,4.18e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-25;42!UBERON:0008947;5.82e-08;29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!5.78e-09!9;UBERON:0002371!1.20e-08!80;UBERON:0001474!4.57e-08!86;UBERON:0002405!5.85e-08!115;UBERON:0000926!3.18e-07!448;UBERON:0004120!3.18e-07!448;UBERON:0006603!3.18e-07!448;UBERON:0004765!6.59e-07!101;UBERON:0001434!6.59e-07!101 | |ontology_enrichment_uberon=UBERON:0001737!5.78e-09!9;UBERON:0002371!1.20e-08!80;UBERON:0001474!4.57e-08!86;UBERON:0002405!5.85e-08!115;UBERON:0000926!3.18e-07!448;UBERON:0004120!3.18e-07!448;UBERON:0006603!3.18e-07!448;UBERON:0004765!6.59e-07!101;UBERON:0001434!6.59e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.80e-29;9!UBERON:0001557;2.80e-29;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.13e-30,9;UBERON:0002371,1.09e-16,76;UBERON:0001474,4.37e-15,82;UBERON:0001557,2.28e-13,19;UBERON:0004765,2.78e-13,90;UBERON:0002405,1.09e-12,93;UBERON:0002390,8.88e-12,98;UBERON:0003061,8.88e-12,98;UBERON:0001434,1.93e-11,100;UBERON:0002193,3.23e-10,108;UBERON:0002204,5.73e-07,167 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0.393364276848904,0.383829398097213,0.77408061658038,0,0,0,0,0,0,1.66198622559563,1.00272223735071,1.30206522429511,0,0.32389366601898,0,0,0.377875943688809,1.4555043671269,0.697287110717054,2.87817521615278,2.16794459626573,0.575384784644301,1.0246428261164,1.89185783910868,1.03423704220986,2.5819387343353,5.41705946377367,0.564727018627814,0.545812300115692,1.57306439111559,0.612167784741805,4.49300637906531,1.91801137739712,0,0.997318288108159,1.27867425159808,1.16083695451434,3.40431134814684,2.4912889959823,0.75374599577023,1.0429658368404,2.6062661364614,0.605399502633369,3.68277635987565,4.1140110367315,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0.74000264525148,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37600571456411,2.47266929278557,0,0,0,0,0,0,0.919463387397059,0.751190294532984,0.226864366320042,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.184099797284599,0,0.355009592516614,0.302256294682921,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0.928735856063958,0.721879481669586,1.0647612003586,1.68584690078102,1.92808823906786,2.09558548191549,1.96091499683166,1.89816495288877,1.8876383142423,1.96221465125346,1.15424147083917,0,0,0.8231480226628,0,11.4079531339648,11.7939266001315,12.9973779469909,0,0.122988438543114,0.343135620597051,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0.469634776943287,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0,0.179117045405697,0.290633938513962,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,0,1.42636905040718,0,0.410952645100767,0.179060963239896,0,0.197030760201927,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0.178428988797162,0.473107245101804,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0,0,0,0,0,0.533637789017222,0.303127571446259,0,0,0.744323423456331,0.460385919864187,0,0.384417447767103,1.02341449813341,0.482561763430822,0,0.462629081407967,0.532685175939381,0.0821271560138091,0,0.697262270759755,0.241718899183244,0.200506470303285,0.0920809889358963,0.34444334449382,0.728364672026868,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0.325378394664303,0.618246069886334,0.183138929636687,0.41254749960294,0,0,0,0,0.308097234229289,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0.127612712494584,0.2023155617111,1.39453664789186,0.62962469366128,0,0,0,0,0.18532421910392,0.572499546967965,0,0,0.190630193923825,0,0,0.318203247925937,0.78494864019923,0.539617372749944,0.54907405947211,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0.66343897524122,1.75380354101505,0.578775534266688,0,0.608731130888112,0.92947049429925,0.281695602532241,0.143411352204052,0,0.7133421029625,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.95497793895076,0.296964680832639,0,0,0,0.333926115068718,0,0,0,0,0.251932747854276,0.613612095012929,0,0,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0.173624994933292,0,0,0,0.442317039724898,0,0,0.32681539055697,0.278847488557207,0.0769502585037971,2.73460934032803,0,0.269272933229316,0.325942115766024,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.189559738885464,2.1045278718029,0,0,0,0,1.19472429772959,0,0.138674673013139,0,0,0.522355239482415,0.17472666824203,0,0.967563312890852,1.31560770755134,1.06750094169172,0.0969890164884194,0,0,0,0.397429223405979,0,0,0,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0.576219191952599,0.248505071130865,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0.199679000498991,0,0.223171457441873,0,0,0,0.315132729228895,0.329663433524666,0.471824806979294,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0,0,0,0.449947783103001,0.77380195455795,0,0,0.157611414598396,0,0,0.717149357331379,0.575745591958336,0,0,0,0,0,0,1.19730191562487,0.246277562248017,0,0.113312091520126,8.64658178700686,0,0.129282956361551,0.26446520348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| ||
|short_description=p2@PTS | |short_description=p2@PTS | ||
}} | }} |
Latest revision as of 05:21, 25 September 2015
Short description: | p2@PTS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTS_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -286bp_to_ENST00000280362, NM_000317, uc001pnj.3, uc009yyo.2_5end |
EntrezGene: | PTS |
HGNC: | 9689 |
UniProt: | Q03393 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.55e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.55e-35 | 42 |
defensive cell | 3.49e-30 | 48 |
phagocyte | 3.49e-30 | 48 |
monopoietic cell | 5.28e-23 | 59 |
monocyte | 5.28e-23 | 59 |
monoblast | 5.28e-23 | 59 |
promonocyte | 5.28e-23 | 59 |
macrophage dendritic cell progenitor | 4.44e-22 | 61 |
myeloid lineage restricted progenitor cell | 5.20e-20 | 66 |
granulocyte monocyte progenitor cell | 1.24e-19 | 67 |
myeloid leukocyte | 6.60e-18 | 72 |
myeloid cell | 3.23e-10 | 108 |
common myeloid progenitor | 3.23e-10 | 108 |
nongranular leukocyte | 2.73e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.07e-08 | 120 |
leukocyte | 4.18e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.13e-30 | 9 |
bone marrow | 1.09e-16 | 76 |
bone element | 4.37e-15 | 82 |
upper respiratory tract | 2.28e-13 | 19 |
skeletal element | 2.78e-13 | 90 |
immune system | 1.09e-12 | 93 |
hematopoietic system | 8.88e-12 | 98 |
blood island | 8.88e-12 | 98 |
skeletal system | 1.93e-11 | 100 |
hemolymphoid system | 3.23e-10 | 108 |
musculoskeletal system | 5.73e-07 | 167 |