FFCP PHASE1:Hg19::chr17:7749478..7749496,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:7749478..7749496,+
|short_description=p@chr17:7749478..7749496,+
|description=CAGE_peak_at_chr17:7749478..7749496,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:7749478..7749496,+ | |||
|coexpression_cluster_id=C532 | |||
|description=CAGE_peak_at_chr17:7749478..7749496,+ | |||
|id=chr17:7749478..7749496,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.21e-25!42;CL:0000860!3.57e-23!45;CL:0000766!4.66e-21!76;CL:0000557!8.72e-17!71;CL:0000839!3.62e-16!70;CL:0002009!5.65e-16!65;CL:0002194!7.22e-16!63;CL:0000576!7.22e-16!63;CL:0000040!7.22e-16!63;CL:0000559!7.22e-16!63;CL:0000763!2.27e-13!112;CL:0000049!2.27e-13!112;CL:0000738!3.16e-12!140;CL:0002031!2.94e-09!124;CL:0002087!8.27e-09!119;CL:0002032!1.00e-08!165;CL:0000837!1.00e-08!165;CL:0000037!1.77e-08!172;CL:0000566!1.77e-08!172;CL:0000988!2.05e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.95e-84;33!CL:0002057;1.95e-84;33!CL:0000473;2.55e-59;39!CL:0000234;2.55e-59;39!CL:0000576;2.97e-37;48!CL:0000766;9.54e-31;69!CL:0000763;5.82e-16;100!CL:0000775;1.46e-14;3!CL:0000094;3.51e-14;8!CL:0002087;3.21e-11;104!CL:0000081;3.03e-10;11!CL:0000771;5.32e-10;2!CL:0000738;8.91e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.32e-70,42;CL:0002057,6.32e-70,42;CL:0000473,2.55e-65,48;CL:0000234,2.55e-65,48;CL:0000766,5.19e-63,72;CL:0002194,5.40e-51,59;CL:0000576,5.40e-51,59;CL:0000040,5.40e-51,59;CL:0000559,5.40e-51,59;CL:0002009,3.81e-49,61;CL:0000839,7.63e-49,66;CL:0000557,4.97e-48,67;CL:0000763,8.40e-40,108;CL:0000049,8.40e-40,108;CL:0000738,2.96e-32,136;CL:0002032,3.95e-26,161;CL:0000837,3.95e-26,161;CL:0002031,4.30e-26,120;CL:0002087,2.80e-25,115;CL:0000037,9.72e-25,168;CL:0000988,4.12e-23,177;CL:0000775,1.53e-14,3;CL:0000094,3.23e-14,8;CL:0000081,2.86e-10,11;CL:0000771,4.43e-10,2;CL:0000134,2.14e-09,354;CL:0002320,4.58e-09,361;CL:0000219,1.20e-08,386;CL:0000034,2.50e-07,441;CL:0000723,6.18e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-53;42!CL:0000049;1.54e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.15e-16!102;UBERON:0003061!9.15e-16!102;UBERON:0002371!3.40e-14!80;UBERON:0001474!5.40e-14!86;UBERON:0002193!1.40e-13!112;UBERON:0004765!1.07e-09!101;UBERON:0001434!1.07e-09!101;UBERON:0002405!5.17e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.18e-41,76;UBERON:0001474,3.58e-38,82;UBERON:0004765,3.03e-34,90;UBERON:0002390,1.99e-33,98;UBERON:0003061,1.99e-33,98;UBERON:0002405,6.06e-33,93;UBERON:0001434,3.29e-30,100;UBERON:0002193,9.54e-30,108;UBERON:0002204,1.39e-15,167;UBERON:0003081,5.90e-14,203;UBERON:0002384,1.29e-08,371 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,0.802177789880567,0.868043482863407,0,0,0,1.01778767145695,2.64513160582167,0.727752183563449,5.11343881192506,6.57868620834921,4.02618282163635,6.61692502340946,3.33008918487831,3.07426898855161,6.55016793399575,7.10033151942209,5.41705946377367,3.57660445130949,4.36649840092553,0.674170453335254,10.1007684482398,4.17207735198922,10.2293940127847,0.989553900560148,1.19678194572979,0.852449501065388,7.2552309657146,9.64554881974938,15.5705562248894,3.76872997885115,4.17186334736161,1.3031330682307,3.63239701580021,3.31449872388808,2.53169909952708,0.211255286311942,0,0,0.336985893439485,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,1.14681968437569,1.32171328579026,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0.973269740605272,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0.183201743930407,1.31780417436063,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.515281080091258,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.219500570817251,0,0.100528972411631,0.370353780634118,0,1.03993478527958,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,28.5744677979647,0,0.207328115540772,0.144119953416961,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0,0.646882724578552,0.385029108839245,0,0,0,0.167516265334349,0.637938751653163,2.24702107184155,17.9496875522415,1.24324654030811,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0.177561725313127,0,0,0,0.120859449591622,0.40101294060657,0.276242966807689,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0.443430153536676,0.229723400206959,0,1.52927441428475,0,0,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0.213648142254946,0,0.245040215981032,0,0,0.213425530045242,0,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0.503865495708552,0.102268682502155,0.123084805461069,0.311039587661807,0,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0.508507300585533,0.236387681767936,0.689486746482929,0,0,0,0.120596438625408,1.52581736317083,0.663475559587348,0.295547618953547,0,0,0.139423744278603,0,0,0,0.0897576444097721,0.108647371922008,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0.0884575645033392,0,0.889563386041866,0,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0.0870592065804026,0,0,0,0,0.0821154570532092,0.0969890164884194,0.0882561266915003,0,0.274083849293502,0,0,0.195551382734803,0,0,0.39961921916426,0.144090417154106,0.114536596165916,0.343189995723929,0,0.124252535565433,0,0,0.313808538937,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0.599037001496973,0.429226048136571,0,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0.272406812223151,0,0,0,0.899895566206002,0,0.0607495566580247,0,0.0788057072991982,0.262272940674991,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0.366078794705889,0.250381861413,0,0.332787154610557,0.0620964029413835,0,0,0,0.285465333544967,0,1.87333962322753,0.28984205722165,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0.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| ||
|short_description=p@chr17:7749478..7749496,+ | |||
}} | }} |
Latest revision as of 22:20, 25 July 2015
Short description: | p@chr17:7749478..7749496, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7749478..7749496, + |
Coexpression cluster: | C532_Mast_CD14_Eosinophils_seminal_ductus_Neutrophils_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.32e-70 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.32e-70 | 42 |
defensive cell | 2.55e-65 | 48 |
phagocyte | 2.55e-65 | 48 |
myeloid leukocyte | 5.19e-63 | 72 |
monopoietic cell | 5.40e-51 | 59 |
monocyte | 5.40e-51 | 59 |
monoblast | 5.40e-51 | 59 |
promonocyte | 5.40e-51 | 59 |
macrophage dendritic cell progenitor | 3.81e-49 | 61 |
myeloid lineage restricted progenitor cell | 7.63e-49 | 66 |
granulocyte monocyte progenitor cell | 4.97e-48 | 67 |
myeloid cell | 8.40e-40 | 108 |
common myeloid progenitor | 8.40e-40 | 108 |
leukocyte | 2.96e-32 | 136 |
hematopoietic oligopotent progenitor cell | 3.95e-26 | 161 |
hematopoietic multipotent progenitor cell | 3.95e-26 | 161 |
hematopoietic lineage restricted progenitor cell | 4.30e-26 | 120 |
nongranular leukocyte | 2.80e-25 | 115 |
hematopoietic stem cell | 9.72e-25 | 168 |
hematopoietic cell | 4.12e-23 | 177 |
neutrophil | 1.53e-14 | 3 |
granulocyte | 3.23e-14 | 8 |
blood cell | 2.86e-10 | 11 |
eosinophil | 4.43e-10 | 2 |
mesenchymal cell | 2.14e-09 | 354 |
connective tissue cell | 4.58e-09 | 361 |
motile cell | 1.20e-08 | 386 |
stem cell | 2.50e-07 | 441 |
somatic stem cell | 6.18e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.18e-41 | 76 |
bone element | 3.58e-38 | 82 |
skeletal element | 3.03e-34 | 90 |
hematopoietic system | 1.99e-33 | 98 |
blood island | 1.99e-33 | 98 |
immune system | 6.06e-33 | 93 |
skeletal system | 3.29e-30 | 100 |
hemolymphoid system | 9.54e-30 | 108 |
musculoskeletal system | 1.39e-15 | 167 |
lateral plate mesoderm | 5.90e-14 | 203 |
connective tissue | 1.29e-08 | 371 |