FFCP PHASE1:Hg19::chr10:93107524..93107535,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:93107524..93107535,+ | |||
|coexpression_cluster_id=C1601 | |coexpression_cluster_id=C1601 | ||
|description=CAGE_peak_at_chr10:93107524..93107535,+ | |description=CAGE_peak_at_chr10:93107524..93107535,+ | ||
|id=chr10:93107524..93107535,+ | |id=chr10:93107524..93107535,+ | ||
|ontology_enrichment_celltype=CL:0002166!4.31e-12!3;CL:0002621!1.65e-11!3;CL:0002159!9.07e-10!13;CL:0002076!6.88e-09!43;CL:0002327!2.00e-08!4;CL:0000054!1.77e-07!2;CL:0000137!1.77e-07!2;CL:0000092!1.77e-07!2;CL:0000066!3.23e-07!254;CL:0000223!7.31e-07!59 | |ontology_enrichment_celltype=CL:0002166!4.31e-12!3;CL:0002621!1.65e-11!3;CL:0002159!9.07e-10!13;CL:0002076!6.88e-09!43;CL:0002327!2.00e-08!4;CL:0000054!1.77e-07!2;CL:0000137!1.77e-07!2;CL:0000092!1.77e-07!2;CL:0000066!3.23e-07!254;CL:0000223!7.31e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002166;9.14e-39;3!CL:0002159;4.76e-32;14!CL:0002621;1.51e-17;3!CL:0002077;4.16e-15;34!CL:0000362;4.14e-13;9!CL:0000312;4.55e-11;5!CL:0000240;2.25e-09;6!CL:0000311;2.25e-09;6!CL:0000079;2.25e-09;6!CL:0000237;2.25e-09;6!CL:0002368;3.00e-09;13!CL:0002076;9.36e-08;42!CL:0000317;1.93e-07;2!CL:1000448;1.93e-07;2!CL:0002308;1.93e-07;2!CL:0002140;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,6.65e-39,3;CL:0002159,5.30e-32,14;CL:0002621,1.64e-17,3;CL:0002077,1.68e-17,34;CL:0000362,4.99e-13,9;CL:0000312,5.29e-11,5;CL:0000240,2.56e-09,6;CL:0000311,2.56e-09,6;CL:0000079,2.56e-09,6;CL:0000237,2.56e-09,6;CL:0000036,2.56e-09,6;CL:0000357,2.56e-09,6;CL:0000114,2.56e-09,6;CL:0002368,3.04e-09,13;CL:0000221,1.01e-07,72;CL:0000317,2.12e-07,2;CL:1000448,2.12e-07,2;CL:0002308,2.12e-07,2;CL:0002140,2.12e-07,2;CL:0002076,2.32e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000357;2.25e-09;6!CL:0000114;2.25e-09;6 | |||
|ontology_enrichment_disease=DOID:200!1.77e-07!2;DOID:4305!1.77e-07!2 | |ontology_enrichment_disease=DOID:200!1.77e-07!2;DOID:4305!1.77e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.65e-11!3;UBERON:0001708!3.72e-09!4;UBERON:0001704!3.72e-09!4;UBERON:0001911!2.00e-08!4;UBERON:0005333!2.00e-08!4;UBERON:0008425!2.00e-08!4;UBERON:0005311!2.00e-08!4;UBERON:0003129!8.15e-08!11;UBERON:0000076!4.72e-07!8 | |ontology_enrichment_uberon=UBERON:0001949!1.65e-11!3;UBERON:0001708!3.72e-09!4;UBERON:0001704!3.72e-09!4;UBERON:0001911!2.00e-08!4;UBERON:0005333!2.00e-08!4;UBERON:0008425!2.00e-08!4;UBERON:0005311!2.00e-08!4;UBERON:0003129!8.15e-08!11;UBERON:0000076!4.72e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;2.85e-29;4!UBERON:0008895;2.85e-29;4!UBERON:0011159;1.45e-23;5!UBERON:0001949;1.51e-17;3!UBERON:0011137;4.73e-11;11!UBERON:0010323;4.73e-11;11!UBERON:0010371;2.35e-10;31!UBERON:0001003;4.38e-08;15!UBERON:0007376;4.38e-08;15!UBERON:0003929;4.75e-08;7!UBERON:0000075;9.25e-08;16!UBERON:0002419;1.93e-07;2!UBERON:0007771;1.93e-07;2!UBERON:0003297;1.93e-07;2!UBERON:0001821;1.93e-07;2!UBERON:0003487;1.93e-07;2!UBERON:0001820;1.93e-07;2!UBERON:0003350;3.78e-07;8!UBERON:0001828;3.78e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,2.25e-29,4;UBERON:0008895,2.25e-29,4;UBERON:0011159,1.20e-23,5;UBERON:0010188,8.04e-20,6;UBERON:0002539,8.04e-20,6;UBERON:0008816,8.04e-20,6;UBERON:0001949,1.64e-17,3;UBERON:0010323,4.34e-11,11;UBERON:0003102,3.18e-09,99;UBERON:0011137,7.95e-09,14;UBERON:0001003,4.88e-08,15;UBERON:0007376,4.88e-08,15;UBERON:0007383,4.88e-08,15;UBERON:0000075,8.74e-08,16;UBERON:0002419,2.12e-07,2;UBERON:0007771,2.12e-07,2;UBERON:0003297,2.12e-07,2;UBERON:0001821,2.12e-07,2;UBERON:0003487,2.12e-07,2;UBERON:0001820,2.12e-07,2;UBERON:0005089,2.12e-07,2;UBERON:0005088,2.12e-07,2;UBERON:0003350,3.90e-07,8;UBERON:0001828,3.90e-07,8;UBERON:0008814,5.67e-07,18 | |||
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| ||
|short_description=p@chr10:93107524..93107535,+ | |short_description=p@chr10:93107524..93107535,+ | ||
}} | }} |
Latest revision as of 16:44, 23 July 2015
Short description: | p@chr10:93107524..93107535, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:93107524..93107535, + |
Coexpression cluster: | C1601_Mallassezderived_Gingival_Keratinocyte_Prostate_Sebocyte_salivary_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 6.65e-39 | 3 |
general ecto-epithelial cell | 5.30e-32 | 14 |
gingival epithelial cell | 1.64e-17 | 3 |
ecto-epithelial cell | 1.68e-17 | 34 |
epidermal cell | 4.99e-13 | 9 |
keratinocyte | 5.29e-11 | 5 |
stratified squamous epithelial cell | 2.56e-09 | 6 |
keratin accumulating cell | 2.56e-09 | 6 |
stratified epithelial cell | 2.56e-09 | 6 |
keratinizing barrier epithelial cell | 2.56e-09 | 6 |
epithelial fate stem cell | 2.56e-09 | 6 |
stratified epithelial stem cell | 2.56e-09 | 6 |
surface ectodermal cell | 2.56e-09 | 6 |
respiratory epithelial cell | 3.04e-09 | 13 |
ectodermal cell | 1.01e-07 | 72 |
sebum secreting cell | 2.12e-07 | 2 |
epithelial cell of sweat gland | 2.12e-07 | 2 |
epithelial cell of skin gland | 2.12e-07 | 2 |
acinar cell of sebaceous gland | 2.12e-07 | 2 |
endo-epithelial cell | 2.32e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 2.25e-29 | 4 |
splanchnocranium | 2.25e-29 | 4 |
primary subdivision of cranial skeletal system | 1.20e-23 | 5 |
protuberance | 8.04e-20 | 6 |
pharyngeal arch | 8.04e-20 | 6 |
embryonic head | 8.04e-20 | 6 |
gingival epithelium | 1.64e-17 | 3 |
cranial skeletal system | 4.34e-11 | 11 |
surface structure | 3.18e-09 | 99 |
axial skeletal system | 7.95e-09 | 14 |
skin epidermis | 4.88e-08 | 15 |
outer epithelium | 4.88e-08 | 15 |
enveloping layer of ectoderm | 4.88e-08 | 15 |
subdivision of skeletal system | 8.74e-08 | 16 |
skin gland | 2.12e-07 | 2 |
epidermis gland | 2.12e-07 | 2 |
gland of integumental system | 2.12e-07 | 2 |
sebaceous gland | 2.12e-07 | 2 |
skin sebaceous gland | 2.12e-07 | 2 |
sweat gland | 2.12e-07 | 2 |
sweat gland placode | 2.12e-07 | 2 |
sebaceous gland placode | 2.12e-07 | 2 |
epithelium of mucosa | 3.90e-07 | 8 |
gingiva | 3.90e-07 | 8 |
pharyngeal arch system | 5.67e-07 | 18 |