FFCP PHASE1:Hg19::chr10:80732616..80732631,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:80732616..80732631,+ | |||
|coexpression_cluster_id=C728 | |coexpression_cluster_id=C728 | ||
|description=CAGE_peak_at_chr10:80732616..80732631,+ | |description=CAGE_peak_at_chr10:80732616..80732631,+ | ||
|id=chr10:80732616..80732631,+ | |id=chr10:80732616..80732631,+ | ||
|ontology_enrichment_celltype=CL:0000860!7.81e-51!45;CL:0000766!1.17e-50!76;CL:0002057!2.46e-49!42;CL:0000839!3.30e-48!70;CL:0000557!2.38e-47!71;CL:0002194!7.16e-44!63;CL:0000576!7.16e-44!63;CL:0000040!7.16e-44!63;CL:0000559!7.16e-44!63;CL:0002009!3.63e-42!65;CL:0000763!1.26e-31!112;CL:0000049!1.26e-31!112;CL:0000738!6.72e-25!140;CL:0002031!6.85e-23!124;CL:0002087!2.51e-21!119;CL:0000037!9.79e-19!172;CL:0000566!9.79e-19!172;CL:0002032!4.35e-18!165;CL:0000837!4.35e-18!165;CL:0000988!6.54e-18!182;CL:0000134!2.61e-13!358;CL:0000219!5.21e-13!390;CL:0002320!1.04e-12!365;CL:0000048!1.96e-11!430;CL:0000723!5.13e-11!436;CL:0000034!1.77e-10!444;CL:0002274!1.07e-07!5;CL:0000457!1.07e-07!5;CL:0002191!1.07e-07!5;CL:0000097!1.07e-07!5;CL:0000831!1.07e-07!5;CL:0002028!1.07e-07!5;CL:0000767!2.68e-07!3;CL:0000063!3.70e-07!578;CL:0002371!6.49e-07!591 | |ontology_enrichment_celltype=CL:0000860!7.81e-51!45;CL:0000766!1.17e-50!76;CL:0002057!2.46e-49!42;CL:0000839!3.30e-48!70;CL:0000557!2.38e-47!71;CL:0002194!7.16e-44!63;CL:0000576!7.16e-44!63;CL:0000040!7.16e-44!63;CL:0000559!7.16e-44!63;CL:0002009!3.63e-42!65;CL:0000763!1.26e-31!112;CL:0000049!1.26e-31!112;CL:0000738!6.72e-25!140;CL:0002031!6.85e-23!124;CL:0002087!2.51e-21!119;CL:0000037!9.79e-19!172;CL:0000566!9.79e-19!172;CL:0002032!4.35e-18!165;CL:0000837!4.35e-18!165;CL:0000988!6.54e-18!182;CL:0000134!2.61e-13!358;CL:0000219!5.21e-13!390;CL:0002320!1.04e-12!365;CL:0000048!1.96e-11!430;CL:0000723!5.13e-11!436;CL:0000034!1.77e-10!444;CL:0002274!1.07e-07!5;CL:0000457!1.07e-07!5;CL:0002191!1.07e-07!5;CL:0000097!1.07e-07!5;CL:0000831!1.07e-07!5;CL:0002028!1.07e-07!5;CL:0000767!2.68e-07!3;CL:0000063!3.70e-07!578;CL:0002371!6.49e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.98e-99;33!CL:0002057;2.98e-99;33!CL:0000473;1.10e-76;39!CL:0000234;1.10e-76;39!CL:0000576;1.71e-55;48!CL:0000766;8.51e-40;69!CL:0000763;3.05e-21;100!CL:0002087;1.88e-13;104!CL:0000097;1.38e-12;5!CL:0000738;5.52e-12;136!CL:0000163;3.47e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.67e-103,42;CL:0002057,1.67e-103,42;CL:0000473,5.07e-97,48;CL:0000234,5.07e-97,48;CL:0000839,5.16e-85,66;CL:0000557,1.09e-83,67;CL:0000766,7.49e-83,72;CL:0002194,1.22e-76,59;CL:0000576,1.22e-76,59;CL:0000040,1.22e-76,59;CL:0000559,1.22e-76,59;CL:0002009,5.20e-74,61;CL:0000763,8.23e-54,108;CL:0000049,8.23e-54,108;CL:0002031,8.42e-45,120;CL:0000738,9.29e-42,136;CL:0002087,3.14e-37,115;CL:0002032,1.65e-34,161;CL:0000837,1.65e-34,161;CL:0000037,7.32e-33,168;CL:0000988,6.20e-31,177;CL:0000134,8.31e-13,354;CL:0000097,1.43e-12,5;CL:0002028,1.43e-12,5;CL:0002320,1.88e-12,361;CL:0000219,3.37e-11,386;CL:0000048,1.15e-09,427;CL:0000723,1.88e-09,433;CL:0000034,3.54e-09,441;CL:0000163,3.55e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.92e-77;42!CL:0000049;1.21e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!7.28e-47!86;UBERON:0002371!8.15e-45!80;UBERON:0002405!4.67e-40!115;UBERON:0004765!8.07e-38!101;UBERON:0001434!8.07e-38!101;UBERON:0002390!1.93e-37!102;UBERON:0003061!1.93e-37!102;UBERON:0002193!4.86e-36!112;UBERON:0002204!1.28e-21!167;UBERON:0003081!8.65e-18!216;UBERON:0002384!6.77e-12!375 | |ontology_enrichment_uberon=UBERON:0001474!7.28e-47!86;UBERON:0002371!8.15e-45!80;UBERON:0002405!4.67e-40!115;UBERON:0004765!8.07e-38!101;UBERON:0001434!8.07e-38!101;UBERON:0002390!1.93e-37!102;UBERON:0003061!1.93e-37!102;UBERON:0002193!4.86e-36!112;UBERON:0002204!1.28e-21!167;UBERON:0003081!8.65e-18!216;UBERON:0002384!6.77e-12!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.55e-73,76;UBERON:0001474,1.18e-67,82;UBERON:0004765,2.92e-61,90;UBERON:0002405,3.83e-59,93;UBERON:0002390,6.73e-56,98;UBERON:0003061,6.73e-56,98;UBERON:0001434,1.09e-54,100;UBERON:0002193,2.67e-50,108;UBERON:0002204,8.29e-31,167;UBERON:0003081,1.95e-24,203;UBERON:0000926,7.49e-14,315;UBERON:0004120,7.49e-14,315;UBERON:0006603,7.49e-14,315;UBERON:0002384,5.75e-12,371 | |||
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| ||
|short_description=p@chr10:80732616..80732631,+ | |short_description=p@chr10:80732616..80732631,+ | ||
}} | }} |
Latest revision as of 15:51, 23 July 2015
Short description: | p@chr10:80732616..80732631, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:80732616..80732631, + |
Coexpression cluster: | C728_Mast_CD14_Basophils_chorionic_immature_Monocytederived_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.67e-103 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.67e-103 | 42 |
defensive cell | 5.07e-97 | 48 |
phagocyte | 5.07e-97 | 48 |
myeloid lineage restricted progenitor cell | 5.16e-85 | 66 |
granulocyte monocyte progenitor cell | 1.09e-83 | 67 |
myeloid leukocyte | 7.49e-83 | 72 |
monopoietic cell | 1.22e-76 | 59 |
monocyte | 1.22e-76 | 59 |
monoblast | 1.22e-76 | 59 |
promonocyte | 1.22e-76 | 59 |
macrophage dendritic cell progenitor | 5.20e-74 | 61 |
myeloid cell | 8.23e-54 | 108 |
common myeloid progenitor | 8.23e-54 | 108 |
hematopoietic lineage restricted progenitor cell | 8.42e-45 | 120 |
leukocyte | 9.29e-42 | 136 |
nongranular leukocyte | 3.14e-37 | 115 |
hematopoietic oligopotent progenitor cell | 1.65e-34 | 161 |
hematopoietic multipotent progenitor cell | 1.65e-34 | 161 |
hematopoietic stem cell | 7.32e-33 | 168 |
hematopoietic cell | 6.20e-31 | 177 |
mesenchymal cell | 8.31e-13 | 354 |
mast cell | 1.43e-12 | 5 |
basophil mast progenitor cell | 1.43e-12 | 5 |
connective tissue cell | 1.88e-12 | 361 |
motile cell | 3.37e-11 | 386 |
multi fate stem cell | 1.15e-09 | 427 |
somatic stem cell | 1.88e-09 | 433 |
stem cell | 3.54e-09 | 441 |
endocrine cell | 3.55e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.55e-73 | 76 |
bone element | 1.18e-67 | 82 |
skeletal element | 2.92e-61 | 90 |
immune system | 3.83e-59 | 93 |
hematopoietic system | 6.73e-56 | 98 |
blood island | 6.73e-56 | 98 |
skeletal system | 1.09e-54 | 100 |
hemolymphoid system | 2.67e-50 | 108 |
musculoskeletal system | 8.29e-31 | 167 |
lateral plate mesoderm | 1.95e-24 | 203 |
mesoderm | 7.49e-14 | 315 |
mesoderm-derived structure | 7.49e-14 | 315 |
presumptive mesoderm | 7.49e-14 | 315 |
connective tissue | 5.75e-12 | 371 |