FFCP PHASE1:Hg19::chr17:77020146..77020158,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:77020146..77020158,+
|short_description=p7@C1QTNF1
|description=CAGE_peak_7_at_C1QTNF1_5end
|association_with_transcript=-92bp_to_ENST00000311661,ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114897 | |EntrezGene=114897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14324 | |HGNC=14324 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXJ1 | |UniProt=Q9BXJ1 | ||
|association_with_transcript=-92bp_to_ENST00000311661,ENST00000339142,NM_030968,NM_198594,uc002jwp.2,uc002jwq.2_5end | |||
|cluster_id=chr17:77020146..77020158,+ | |||
|coexpression_cluster_id=C3694 | |||
|description=CAGE_peak_7_at_C1QTNF1_5end | |||
|id=chr17:77020146..77020158,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.67e-29!180;CL:0000680!2.43e-22!57;CL:0000056!2.43e-22!57;CL:0000355!2.43e-22!57;CL:0000187!4.32e-22!54;CL:0000183!5.95e-21!59;CL:0000192!3.65e-20!42;CL:0000514!3.65e-20!42;CL:0000393!1.00e-18!60;CL:0000211!1.00e-18!60;CL:0000359!6.89e-17!32;CL:0002494!1.21e-12!16;CL:0000057!4.13e-12!75;CL:0000222!8.13e-12!119;CL:0000220!3.23e-11!246;CL:0002321!8.40e-11!248;CL:0002539!6.49e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.33e-26;32!CL:0002494;1.20e-21;16!CL:0000192;2.10e-17;43!CL:0000187;6.72e-13;55!CL:0002539;3.03e-12;10!CL:0000393;5.35e-10;61!CL:0000211;5.35e-10;61!CL:0002595;4.81e-09;5!CL:0000134;1.26e-08;55!CL:0000723;1.31e-08;61!CL:0000048;1.15e-07;58!CL:0000569;1.46e-07;4!CL:0002548;2.88e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.33e-28,32;CL:0000187,5.14e-24,55;CL:0000680,1.09e-23,58;CL:0000056,1.09e-23,58;CL:0000355,1.09e-23,58;CL:0000192,1.49e-23,43;CL:0000514,1.49e-23,43;CL:0002494,1.08e-21,16;CL:0000393,1.50e-20,61;CL:0000211,1.50e-20,61;CL:0002539,4.24e-12,10;CL:0000048,8.29e-12,427;CL:0000723,2.79e-11,433;CL:0000034,1.32e-10,441;CL:0000222,1.72e-10,121;CL:0002595,4.34e-09,5;CL:0000057,1.41e-07,76;CL:0000569,1.46e-07,4;CL:0000011,1.46e-07,4;CL:0002548,3.22e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;2.10e-17;43!CL:0000355;6.91e-12;58!CL:0000011;1.46e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!1.18e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.05e-14;14!DOID:193;2.32e-07;29!DOID:120;4.58e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.21e-14,14;DOID:193,2.01e-07,29;DOID:120,3.81e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.12e-28!83;UBERON:0002329!1.12e-28!83;UBERON:0003077!1.12e-28!83;UBERON:0003059!1.12e-28!83;UBERON:0007282!1.12e-28!83;UBERON:0009618!1.12e-28!83;UBERON:0007285!1.12e-28!83;UBERON:0000486!1.13e-24!82;UBERON:0004290!1.54e-24!70;UBERON:0001134!2.23e-21!61;UBERON:0002036!2.23e-21!61;UBERON:0003082!2.23e-21!61;UBERON:0002385!6.73e-20!63;UBERON:0001015!6.73e-20!63;UBERON:0000383!6.73e-20!63;UBERON:0004872!6.85e-20!84;UBERON:0005256!3.29e-19!143;UBERON:0000481!8.42e-18!347;UBERON:0002100!2.96e-17!216;UBERON:0001009!6.36e-17!113;UBERON:0007100!1.71e-16!27;UBERON:0004535!1.91e-15!110;UBERON:0000475!2.30e-15!365;UBERON:0004573!5.48e-15!33;UBERON:0004571!5.48e-15!33;UBERON:0003104!9.39e-15!238;UBERON:0009142!9.39e-15!238;UBERON:0001637!1.30e-14!42;UBERON:0003509!1.30e-14!42;UBERON:0004572!1.30e-14!42;UBERON:0000948!1.49e-14!24;UBERON:0005498!1.49e-14!24;UBERON:0004140!1.49e-14!24;UBERON:0009881!1.49e-14!24;UBERON:0004141!1.49e-14!24;UBERON:0003084!1.49e-14!24;UBERON:0007005!1.49e-14!24;UBERON:0004139!1.49e-14!24;UBERON:0004291!1.49e-14!24;UBERON:0002049!4.29e-14!79;UBERON:0007798!4.29e-14!79;UBERON:0000055!7.19e-13!69;UBERON:0003914!1.05e-12!118;UBERON:0000119!1.30e-12!312;UBERON:0001981!1.91e-12!60;UBERON:0007500!1.91e-12!60;UBERON:0004537!1.91e-12!60;UBERON:0006965!1.91e-12!60;UBERON:0000483!3.99e-12!309;UBERON:0000477!3.15e-11!286;UBERON:0000468!4.36e-11!659;UBERON:0000490!4.73e-11!138;UBERON:0000467!1.30e-09!625;UBERON:0000480!1.84e-09!626;UBERON:0003103!3.57e-09!69;UBERON:0004111!4.98e-09!241;UBERON:0000926!7.27e-09!448;UBERON:0004120!7.27e-09!448;UBERON:0006603!7.27e-09!448;UBERON:0000923!1.67e-08!604;UBERON:0005291!1.67e-08!604;UBERON:0006598!1.67e-08!604;UBERON:0002532!1.67e-08!604;UBERON:0002050!2.30e-08!605;UBERON:0005423!2.30e-08!605;UBERON:0004237!6.49e-08!10;UBERON:0004695!6.49e-08!10;UBERON:0002111!6.49e-08!10;UBERON:0004178!6.49e-08!10;UBERON:0000922!1.32e-07!612;UBERON:0001048!1.47e-07!168;UBERON:0000947!4.53e-07!21;UBERON:0010191!4.53e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.39e-24;25!UBERON:0000948;1.71e-20;22!UBERON:0004573;1.46e-18;33!UBERON:0004571;1.46e-18;33!UBERON:0001637;3.32e-14;42!UBERON:0003509;3.32e-14;42!UBERON:0004572;3.32e-14;42!UBERON:0004237;3.03e-12;10!UBERON:0004695;3.03e-12;10!UBERON:0002111;3.03e-12;10!UBERON:0004178;3.03e-12;10!UBERON:0003834;4.81e-09;5!UBERON:0001533;4.81e-09;5!UBERON:0000055;2.66e-08;65!UBERON:0007500;5.42e-08;56!UBERON:0001981;5.42e-08;56!UBERON:0004537;5.42e-08;56!UBERON:0002119;1.50e-07;4!UBERON:0001135;2.07e-07;15!UBERON:0000992;2.48e-07;13!UBERON:0000947;7.97e-07;21!UBERON:0010191;7.97e-07;21!UBERON:0011135;8.38e-07;5!UBERON:0002216;8.38e-07;5!UBERON:0011134;8.38e-07;5!UBERON:0002209;8.38e-07;5!UBERON:0002213;8.38e-07;5!UBERON:0007844;8.38e-07;5!UBERON:0011138;8.38e-07;5!UBERON:0001130;8.38e-07;5!UBERON:0001066;8.38e-07;5!UBERON:0001468;8.38e-07;5 | |||
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| ||
|short_description=p7@C1QTNF1 | |||
}} | }} |
Latest revision as of 23:52, 17 September 2015
Short description: | p7@C1QTNF1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_C1QTNF1_5end |
Coexpression cluster: | C3694_Cardiac_Smooth_Mesenchymal_mesenchymal_Hair_heart_Fibroblast |
Association with transcript: | -92bp_to_ENST00000311661, ENST00000339142, NM_030968, NM_198594, uc002jwp.2, uc002jwq.2_5end |
EntrezGene: | C1QTNF1 |
HGNC: | 14324 |
UniProt: | Q9BXJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.33e-28 | 32 |
muscle cell | 5.14e-24 | 55 |
muscle precursor cell | 1.09e-23 | 58 |
myoblast | 1.09e-23 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-23 | 58 |
smooth muscle cell | 1.49e-23 | 43 |
smooth muscle myoblast | 1.49e-23 | 43 |
cardiocyte | 1.08e-21 | 16 |
electrically responsive cell | 1.50e-20 | 61 |
electrically active cell | 1.50e-20 | 61 |
aortic smooth muscle cell | 4.24e-12 | 10 |
multi fate stem cell | 8.29e-12 | 427 |
somatic stem cell | 2.79e-11 | 433 |
stem cell | 1.32e-10 | 441 |
mesodermal cell | 1.72e-10 | 121 |
smooth muscle cell of the subclavian artery | 4.34e-09 | 5 |
fibroblast | 1.41e-07 | 76 |
cardiac mesenchymal cell | 1.46e-07 | 4 |
migratory trunk neural crest cell | 1.46e-07 | 4 |
cardiac fibroblast | 3.22e-07 | 6 |
Ontology term | p-value | n |
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