FFCP PHASE1:Hg19::chr10:71562326..71562337,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1305 | |EntrezGene=1305 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2190 | |HGNC=2190 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TAT6 | |UniProt=Q5TAT6 | ||
|association_with_transcript=18bp_to_M59217_5end | |association_with_transcript=18bp_to_M59217_5end | ||
|cluster_id=chr10:71562326..71562337,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_7_at_COL13A1_5end | |description=CAGE_peak_7_at_COL13A1_5end | ||
|id=chr10:71562326..71562337,+ | |id=chr10:71562326..71562337,+ | ||
|ontology_enrichment_celltype=CL:0002274!1.36e-14!5;CL:0000457!1.36e-14!5;CL:0002191!1.36e-14!5;CL:0000097!1.36e-14!5;CL:0000831!1.36e-14!5;CL:0002028!1.36e-14!5;CL:0000163!7.22e-08!9;CL:0002551!4.44e-07!6 | |ontology_enrichment_celltype=CL:0002274!1.36e-14!5;CL:0000457!1.36e-14!5;CL:0002191!1.36e-14!5;CL:0000097!1.36e-14!5;CL:0000831!1.36e-14!5;CL:0002028!1.36e-14!5;CL:0000163!7.22e-08!9;CL:0002551!4.44e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.81e-23;5!CL:0000163;1.58e-13;9!CL:0002537;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.44e-23,5;CL:0002028,1.44e-23,5;CL:0000163,1.40e-13,9;CL:0002537,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.05e-85;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002037!6.23e-08!6;UBERON:0006215!6.23e-08!6;UBERON:0004733!1.31e-07!12;UBERON:0002028!1.31e-07!12;UBERON:0007277!1.31e-07!12;UBERON:0002680!1.60e-07!9;UBERON:0001895!1.60e-07!9;UBERON:0010092!1.60e-07!9;UBERON:0004732!5.84e-07!13;UBERON:0002049!5.98e-07!79;UBERON:0007798!5.98e-07!79;UBERON:0000947!9.82e-07!21;UBERON:0010191!9.82e-07!21 | |ontology_enrichment_uberon=UBERON:0002037!6.23e-08!6;UBERON:0006215!6.23e-08!6;UBERON:0004733!1.31e-07!12;UBERON:0002028!1.31e-07!12;UBERON:0007277!1.31e-07!12;UBERON:0002680!1.60e-07!9;UBERON:0001895!1.60e-07!9;UBERON:0010092!1.60e-07!9;UBERON:0004732!5.84e-07!13;UBERON:0002049!5.98e-07!79;UBERON:0007798!5.98e-07!79;UBERON:0000947!9.82e-07!21;UBERON:0010191!9.82e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.21e-43;6!UBERON:0002680;4.65e-29;9!UBERON:0001895;4.65e-29;9!UBERON:0004733;5.10e-22;12!UBERON:0002028;5.10e-22;12!UBERON:0004732;2.16e-20;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.86e-43,6;UBERON:0006215,4.86e-43,6;UBERON:0002680,5.12e-29,9;UBERON:0001895,5.12e-29,9;UBERON:0010092,5.12e-29,9;UBERON:0004733,5.48e-22,12;UBERON:0002028,5.48e-22,12;UBERON:0007277,5.48e-22,12;UBERON:0004732,2.31e-20,13;UBERON:0003076,9.28e-18,15;UBERON:0003057,9.28e-18,15 | |||
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| ||
|short_description=p7@COL13A1 | |short_description=p7@COL13A1 | ||
}} | }} |
Latest revision as of 01:16, 19 September 2015
Short description: | p7@COL13A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_COL13A1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 18bp_to_M59217_5end |
EntrezGene: | COL13A1 |
HGNC: | 2190 |
UniProt: | Q5TAT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.44e-23 | 5 |
basophil mast progenitor cell | 1.44e-23 | 5 |
endocrine cell | 1.40e-13 | 9 |
amnion mesenchymal stem cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.86e-43 | 6 |
rhombic lip | 4.86e-43 | 6 |
regional part of metencephalon | 5.12e-29 | 9 |
metencephalon | 5.12e-29 | 9 |
future metencephalon | 5.12e-29 | 9 |
segmental subdivision of hindbrain | 5.48e-22 | 12 |
hindbrain | 5.48e-22 | 12 |
presumptive hindbrain | 5.48e-22 | 12 |
segmental subdivision of nervous system | 2.31e-20 | 13 |
posterior neural tube | 9.28e-18 | 15 |
chordal neural plate | 9.28e-18 | 15 |