FFCP PHASE1:Hg19::chr10:70660552..70660564,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:70660552..70660564,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr10:70660552..70660564,- | |description=CAGE_peak_at_chr10:70660552..70660564,- | ||
|id=chr10:70660552..70660564,- | |id=chr10:70660552..70660564,- | ||
|ontology_enrichment_celltype=CL:0000084!4.28e-14!25;CL:0000827!4.28e-14!25;CL:0000791!3.47e-13!18;CL:0000789!3.47e-13!18;CL:0002420!3.47e-13!18;CL:0002419!3.47e-13!18;CL:0000790!3.47e-13!18;CL:0000623!3.98e-13!3;CL:0000825!3.98e-13!3;CL:0000838!4.76e-12!52;CL:0000542!9.21e-12!53;CL:0000051!9.21e-12!53;CL:0002087!1.29e-09!119;CL:0000625!4.76e-09!11;CL:0000738!1.73e-07!140;CL:0002031!4.04e-07!124 | |ontology_enrichment_celltype=CL:0000084!4.28e-14!25;CL:0000827!4.28e-14!25;CL:0000791!3.47e-13!18;CL:0000789!3.47e-13!18;CL:0002420!3.47e-13!18;CL:0002419!3.47e-13!18;CL:0000790!3.47e-13!18;CL:0000623!3.98e-13!3;CL:0000825!3.98e-13!3;CL:0000838!4.76e-12!52;CL:0000542!9.21e-12!53;CL:0000051!9.21e-12!53;CL:0002087!1.29e-09!119;CL:0000625!4.76e-09!11;CL:0000738!1.73e-07!140;CL:0002031!4.04e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000511;6.72e-26;1!CL:0002625;6.72e-26;1!CL:0000216;6.72e-26;1!CL:0000047;1.14e-13;2!CL:0000623;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.58e-26,1;CL:0002625,3.58e-26,1;CL:0000216,3.58e-26,1;CL:0000623,1.81e-09,3;CL:0000825,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.89e-11;10!UBERON:0005564;4.89e-11;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.18e-28;8!UBERON:0001136;6.72e-26;1!UBERON:0001343;6.72e-26;1!UBERON:0004910;6.72e-26;1!UBERON:0004813;6.72e-26;1!UBERON:0003135;4.49e-21;11!UBERON:0004909;1.14e-13;2!UBERON:0000991;2.15e-11;21!UBERON:0003101;6.58e-11;22!UBERON:0000079;6.58e-11;22!UBERON:0005904;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.31e-29,8;UBERON:0001136,3.58e-26,1;UBERON:0001343,3.58e-26,1;UBERON:0004910,3.58e-26,1;UBERON:0005154,3.58e-26,1;UBERON:0005295,3.58e-26,1;UBERON:0004813,3.58e-26,1;UBERON:0005297,3.58e-26,1;UBERON:0005294,3.58e-26,1;UBERON:0010141,3.58e-26,1;UBERON:0005891,3.58e-26,1;UBERON:0003135,3.79e-21,11;UBERON:0004909,8.28e-14,2;UBERON:0000991,1.96e-11,21;UBERON:0009196,1.96e-11,21;UBERON:0009117,1.96e-11,21;UBERON:0005564,1.96e-11,21;UBERON:0004176,6.05e-11,22;UBERON:0003101,6.05e-11,22;UBERON:0000079,6.05e-11,22;UBERON:0005904,1.49e-07,4 | |||
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| ||
|short_description=p@chr10:70660552..70660564,- | |short_description=p@chr10:70660552..70660564,- | ||
}} | }} |
Latest revision as of 14:59, 23 July 2015
Short description: | p@chr10:70660552..70660564, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:70660552..70660564, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.58e-26 | 1 |
seminiferous tubule epithelial cell | 3.58e-26 | 1 |
Sertoli cell | 3.58e-26 | 1 |
natural killer cell | 1.81e-09 | 3 |
pro-NK cell | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 9.31e-29 | 8 |
mesothelium | 3.58e-26 | 1 |
seminiferous tubule of testis | 3.58e-26 | 1 |
epithelium of male gonad | 3.58e-26 | 1 |
epithelial cord | 3.58e-26 | 1 |
sex cord | 3.58e-26 | 1 |
seminiferous tubule epithelium | 3.58e-26 | 1 |
testis sex cord | 3.58e-26 | 1 |
genital ridge | 3.58e-26 | 1 |
primitive sex cord of indifferent gonad | 3.58e-26 | 1 |
coelomic epithelium | 3.58e-26 | 1 |
male reproductive organ | 3.79e-21 | 11 |
epithelium of gonad | 8.28e-14 | 2 |
gonad | 1.96e-11 | 21 |
indifferent external genitalia | 1.96e-11 | 21 |
indifferent gonad | 1.96e-11 | 21 |
gonad primordium | 1.96e-11 | 21 |
external genitalia | 6.05e-11 | 22 |
male organism | 6.05e-11 | 22 |
male reproductive system | 6.05e-11 | 22 |
duct of male reproductive system | 1.49e-07 | 4 |