FFCP PHASE1:Hg19::chr10:65028665..65028674,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221037 | |EntrezGene=221037 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12313 | |HGNC=12313 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_ENST00000469152_5end | |association_with_transcript=-30bp_to_ENST00000469152_5end | ||
|cluster_id=chr10:65028665..65028674,- | |||
|coexpression_cluster_id=C407 | |coexpression_cluster_id=C407 | ||
|description=CAGE_peak_17_at_JMJD1C_5end | |description=CAGE_peak_17_at_JMJD1C_5end | ||
|id=chr10:65028665..65028674,- | |id=chr10:65028665..65028674,- | ||
|ontology_enrichment_celltype=CL:0000738!6.60e-31!140;CL:0002031!4.06e-27!124;CL:0002087!3.70e-24!119;CL:0000766!8.60e-24!76;CL:0000037!4.68e-23!172;CL:0000566!4.68e-23!172;CL:0002057!6.40e-23!42;CL:0000860!1.53e-22!45;CL:0002032!2.80e-22!165;CL:0000837!2.80e-22!165;CL:0000988!6.39e-21!182;CL:0000839!5.95e-19!70;CL:0000557!6.35e-19!71;CL:0002009!1.05e-17!65;CL:0002194!2.10e-16!63;CL:0000576!2.10e-16!63;CL:0000040!2.10e-16!63;CL:0000559!2.10e-16!63;CL:0000763!6.43e-15!112;CL:0000049!6.43e-15!112;CL:0000094!4.82e-08!8;CL:0000838!1.16e-07!52;CL:0000542!2.62e-07!53;CL:0000051!2.62e-07!53 | |ontology_enrichment_celltype=CL:0000738!6.60e-31!140;CL:0002031!4.06e-27!124;CL:0002087!3.70e-24!119;CL:0000766!8.60e-24!76;CL:0000037!4.68e-23!172;CL:0000566!4.68e-23!172;CL:0002057!6.40e-23!42;CL:0000860!1.53e-22!45;CL:0002032!2.80e-22!165;CL:0000837!2.80e-22!165;CL:0000988!6.39e-21!182;CL:0000839!5.95e-19!70;CL:0000557!6.35e-19!71;CL:0002009!1.05e-17!65;CL:0002194!2.10e-16!63;CL:0000576!2.10e-16!63;CL:0000040!2.10e-16!63;CL:0000559!2.10e-16!63;CL:0000763!6.43e-15!112;CL:0000049!6.43e-15!112;CL:0000094!4.82e-08!8;CL:0000838!1.16e-07!52;CL:0000542!2.62e-07!53;CL:0000051!2.62e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.00e-32;33!CL:0002057;4.00e-32;33!CL:0000473;2.76e-23;39!CL:0000234;2.76e-23;39!CL:0000576;2.67e-22;48!CL:0000766;7.22e-22;69!CL:0000094;7.87e-20;8!CL:0000081;4.24e-14;11!CL:0002087;5.37e-13;104!CL:0000738;5.99e-13;136!CL:0000624;2.25e-12;6!CL:0000775;3.10e-11;3!CL:0000623;6.53e-10;3!CL:0000791;1.23e-09;18!CL:0000789;1.23e-09;18!CL:0002419;1.23e-09;18!CL:0000988;1.31e-09;177!CL:0000542;5.94e-09;53!CL:0000763;9.96e-09;100!CL:0002393;1.18e-08;6!CL:0002397;1.18e-08;6!CL:0000084;2.94e-08;25!CL:0000771;7.57e-08;2!CL:0001014;3.55e-07;2!CL:0001016;3.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.69e-61,136;CL:0000037,5.28e-47,168;CL:0002031,1.48e-44,120;CL:0000988,5.83e-44,177;CL:0002032,1.20e-43,161;CL:0000837,1.20e-43,161;CL:0000766,1.46e-43,72;CL:0002087,2.18e-42,115;CL:0000860,3.01e-39,42;CL:0002057,3.01e-39,42;CL:0000473,1.48e-36,48;CL:0000234,1.48e-36,48;CL:0000557,9.09e-33,67;CL:0002009,1.39e-31,61;CL:0000763,8.99e-30,108;CL:0000049,8.99e-30,108;CL:0000839,1.64e-28,66;CL:0002194,8.03e-28,59;CL:0000576,8.03e-28,59;CL:0000040,8.03e-28,59;CL:0000559,8.03e-28,59;CL:0000094,4.56e-20,8;CL:0000134,2.56e-17,354;CL:0002320,1.01e-16,361;CL:0000219,1.25e-14,386;CL:0000081,2.88e-14,11;CL:0000034,1.59e-13,441;CL:0000048,7.66e-13,427;CL:0000838,1.34e-12,52;CL:0000723,1.78e-12,433;CL:0000542,2.77e-12,53;CL:0000051,2.77e-12,53;CL:0000624,3.29e-12,6;CL:0000775,3.13e-11,3;CL:0000623,2.77e-10,3;CL:0000825,2.77e-10,3;CL:0000791,1.62e-09,18;CL:0000789,1.62e-09,18;CL:0002420,1.62e-09,18;CL:0002419,1.62e-09,18;CL:0000790,1.62e-09,18;CL:0000084,4.39e-08,25;CL:0000827,4.39e-08,25;CL:0000771,5.87e-08,2;CL:0001014,3.11e-07,2;CL:0001016,3.11e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-25;42!CL:0000790;1.23e-09;18!CL:0000051;5.94e-09;53!CL:0000049;9.00e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.19e-18!102;UBERON:0003061!3.19e-18!102;UBERON:0002371!7.48e-16!80;UBERON:0001474!2.37e-15!86;UBERON:0002193!7.61e-15!112;UBERON:0004765!3.70e-12!101;UBERON:0001434!3.70e-12!101;UBERON:0002405!8.47e-11!115 | |ontology_enrichment_uberon=UBERON:0002390!3.19e-18!102;UBERON:0003061!3.19e-18!102;UBERON:0002371!7.48e-16!80;UBERON:0001474!2.37e-15!86;UBERON:0002193!7.61e-15!112;UBERON:0004765!3.70e-12!101;UBERON:0001434!3.70e-12!101;UBERON:0002405!8.47e-11!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.98e-07;2!UBERON:0002757;7.98e-07;2!UBERON:0010134;7.98e-07;2!UBERON:0005408;7.98e-07;2!UBERON:0001899;7.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.46e-28,76;UBERON:0001474,1.76e-27,82;UBERON:0002390,5.51e-25,98;UBERON:0003061,5.51e-25,98;UBERON:0004765,2.45e-24,90;UBERON:0002405,3.82e-23,93;UBERON:0002193,6.74e-22,108;UBERON:0001434,4.08e-21,100;UBERON:0002384,6.52e-16,371;UBERON:0002204,1.82e-10,167;UBERON:0003081,1.08e-08,203;UBERON:0001905,7.56e-07,2;UBERON:0002757,7.56e-07,2;UBERON:0010134,7.56e-07,2;UBERON:0005408,7.56e-07,2;UBERON:0001899,7.56e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.229240217243854,0.164201178899891,0,1.57345710739562,2.30297638858328,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0,3.87796785972314,3.00816671205213,1.51907609501096,0,0,0.257575567634187,0.581592955118259,0.377875943688809,0.970336244751265,0.464858073811369,2.87817521615278,1.23882548358041,1.1507695692886,0.768482119587302,1.18241114944293,1.72372840368309,3.22742341791913,0,0.941211697713023,1.09162460023138,0.449446968890169,1.53041946185451,3.85114832491312,3.83602275479425,0.989553900560148,1.39624560335142,1.27867425159808,1.45104619314292,0,1.24564449799115,1.00499466102697,3.65038042894141,3.47502151528187,0,2.94622108790052,1.58231193720442,0.633765858935825,0.212604299965044,1.04829322754188,0.786300418025466,1.05123824989054,1.6072558669708,0.570025487482497,0,0.730656615058536,0,0,0,1.28019066769952,0.400395987036012,1.14950487990897,0,0.954053754535364,2.27685187643779,2.93618594685469,1.14681968437569,1.32171328579026,1.12101712596307,0,2.16380747125216,1.57204305099666,1.02800749499755,0,1.30368906653436,0,0,0.222820913770347,0.294605907474837,0.664601683750863,0.812411591295047,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0.889719378972363,0.535081656179426,0,0.113309342697566,1.14966148080576,0,1.26509846009751,0.637130828648193,0,0,0.301150238155546,0,0,0,0,3.02410114837099,2.13952156626806,1.30341963494519,0,0,0,0,0,0,0,0,0.283604451492204,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0.238490624305342,1.14398982156026,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0,0.280901613404497,0,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0.506328996723799,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0.386521706326594,0,0,0.731842236777572,0.397589304964456,0.580969714347592,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0.290633938513962,0,0.985326475791887,0,0.829312462163088,1.58531948758658,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0,0,1.42636905040718,0.144781306667579,0,0.179060963239896,0.112085143993527,3.54655368363469,1.50939302401662,1.79680250791648,0.254094624222463,0,0.773288812777695,0,0,4.49404214368309,8.97484377612075,4.55857064779639,0.12269149171914,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0,0,0,1.44737618286021,1.2942852049117,0.213455115606889,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0.223874754722178,0.438519753291869,0.261435451024901,0.256450125116389,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0.165284915360978,0,0.382838137483752,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0.142283686696828,0,0,0,0.423347165447766,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0.667396566847634,0,0,0,0,0.33307196799782,0,0.18714054040822,0.293016358543788,0,0.111443384277478,0.852408440419239,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0.306806047506464,0.123084805461069,0,0.179736702294654,0.358042349351218,0,0.197286811273867,0,0,0,0.0927680981618513,1.99613798001194,0.260427761085233,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.552896299656123,0.295547618953547,0,0,0.278847488557207,0.230850775511391,0,0,0.0897576444097721,0,0,0,0,1.02193298195737,0,0,0.225595660617181,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0,0,0.269604531922708,0,0.234264445725339,0.364909578431332,0.19566461893209,0.728341138602278,0.394584402849391,0,0.30607276163049,0.63186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0.347119476670262,0.0979923974143777,0.0870592065804026,0.52418000472609,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,2.91245218081951,0.90392296312213,0,0.19871461170299,0.126621591911757,0,0,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0.262887354279314,2.51354161145029,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0.0824158583811665,0,0,0,0,0.136203406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| ||
|short_description=p17@JMJD1C | |short_description=p17@JMJD1C | ||
}} | }} |
Latest revision as of 20:26, 18 September 2015
Short description: | p17@JMJD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_JMJD1C_5end |
Coexpression cluster: | C407_Neutrophils_CD14_Eosinophils_Peripheral_CD19_CD4_Natural |
Association with transcript: | -30bp_to_ENST00000469152_5end |
EntrezGene: | JMJD1C |
HGNC: | 12313 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.46e-28 | 76 |
bone element | 1.76e-27 | 82 |
hematopoietic system | 5.51e-25 | 98 |
blood island | 5.51e-25 | 98 |
skeletal element | 2.45e-24 | 90 |
immune system | 3.82e-23 | 93 |
hemolymphoid system | 6.74e-22 | 108 |
skeletal system | 4.08e-21 | 100 |
connective tissue | 6.52e-16 | 371 |
musculoskeletal system | 1.82e-10 | 167 |
lateral plate mesoderm | 1.08e-08 | 203 |
pineal body | 7.56e-07 | 2 |
regional part of epithalamus | 7.56e-07 | 2 |
secretory circumventricular organ | 7.56e-07 | 2 |
circumventricular organ | 7.56e-07 | 2 |
epithalamus | 7.56e-07 | 2 |