FFCP PHASE1:Hg19::chr10:64374806..64374819,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:64374806..64374819,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr10:64374806..64374819,+ | |description=CAGE_peak_at_chr10:64374806..64374819,+ | ||
|id=chr10:64374806..64374819,+ | |id=chr10:64374806..64374819,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.19e-107!42;CL:0000860!6.14e-100!45;CL:0002009!3.02e-78!65;CL:0002194!1.56e-76!63;CL:0000576!1.56e-76!63;CL:0000040!1.56e-76!63;CL:0000559!1.56e-76!63;CL:0000766!9.56e-74!76;CL:0000557!5.10e-71!71;CL:0000839!3.65e-68!70;CL:0000763!3.80e-50!112;CL:0000049!3.80e-50!112;CL:0000738!3.35e-45!140;CL:0002031!2.49e-44!124;CL:0002087!4.96e-44!119;CL:0002032!5.22e-37!165;CL:0000837!5.22e-37!165;CL:0000988!1.98e-36!182;CL:0000037!3.87e-35!172;CL:0000566!3.87e-35!172;CL:0000767!1.53e-12!3;CL:0000134!4.12e-12!358;CL:0002320!1.06e-11!365;CL:0000219!4.92e-11!390;CL:0002393!1.14e-10!9;CL:0002397!1.14e-10!9;CL:0000048!1.59e-08!430;CL:0000723!2.79e-08!436;CL:0000034!5.79e-08!444 | |ontology_enrichment_celltype=CL:0002057!1.19e-107!42;CL:0000860!6.14e-100!45;CL:0002009!3.02e-78!65;CL:0002194!1.56e-76!63;CL:0000576!1.56e-76!63;CL:0000040!1.56e-76!63;CL:0000559!1.56e-76!63;CL:0000766!9.56e-74!76;CL:0000557!5.10e-71!71;CL:0000839!3.65e-68!70;CL:0000763!3.80e-50!112;CL:0000049!3.80e-50!112;CL:0000738!3.35e-45!140;CL:0002031!2.49e-44!124;CL:0002087!4.96e-44!119;CL:0002032!5.22e-37!165;CL:0000837!5.22e-37!165;CL:0000988!1.98e-36!182;CL:0000037!3.87e-35!172;CL:0000566!3.87e-35!172;CL:0000767!1.53e-12!3;CL:0000134!4.12e-12!358;CL:0002320!1.06e-11!365;CL:0000219!4.92e-11!390;CL:0002393!1.14e-10!9;CL:0002397!1.14e-10!9;CL:0000048!1.59e-08!430;CL:0000723!2.79e-08!436;CL:0000034!5.79e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.27e-129;33!CL:0002057;8.27e-129;33!CL:0000473;9.76e-96;39!CL:0000234;9.76e-96;39!CL:0000576;9.91e-60;48!CL:0000766;2.28e-36;69!CL:0000763;2.84e-18;100!CL:0002087;2.18e-15;104!CL:0000738;1.21e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.11e-112,42;CL:0002057,6.11e-112,42;CL:0000473,7.54e-105,48;CL:0000234,7.54e-105,48;CL:0002194,5.58e-83,59;CL:0000576,5.58e-83,59;CL:0000040,5.58e-83,59;CL:0000559,5.58e-83,59;CL:0002009,3.71e-80,61;CL:0000839,7.76e-74,66;CL:0000557,1.10e-72,67;CL:0000766,2.04e-72,72;CL:0000763,5.73e-47,108;CL:0000049,5.73e-47,108;CL:0002087,1.08e-40,115;CL:0002031,8.13e-39,120;CL:0000738,2.10e-36,136;CL:0002032,4.76e-30,161;CL:0000837,4.76e-30,161;CL:0000037,1.32e-28,168;CL:0000988,6.48e-27,177;CL:0000134,5.20e-11,354;CL:0002320,1.07e-10,361;CL:0000219,1.35e-09,386;CL:0000048,3.02e-08,427;CL:0000723,4.63e-08,433;CL:0000034,8.08e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.49e-83;42!CL:0000049;2.77e-14;108!UBERON:0005425;1.06e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.49e-62!80;UBERON:0001474!2.62e-57!86;UBERON:0002390!1.17e-55!102;UBERON:0003061!1.17e-55!102;UBERON:0002193!5.98e-50!112;UBERON:0004765!1.25e-47!101;UBERON:0001434!1.25e-47!101;UBERON:0002405!2.92e-43!115;UBERON:0002204!1.46e-25!167;UBERON:0003081!9.80e-22!216;UBERON:0002384!3.85e-11!375 | |ontology_enrichment_uberon=UBERON:0002371!3.49e-62!80;UBERON:0001474!2.62e-57!86;UBERON:0002390!1.17e-55!102;UBERON:0003061!1.17e-55!102;UBERON:0002193!5.98e-50!112;UBERON:0004765!1.25e-47!101;UBERON:0001434!1.25e-47!101;UBERON:0002405!2.92e-43!115;UBERON:0002204!1.46e-25!167;UBERON:0003081!9.80e-22!216;UBERON:0002384!3.85e-11!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.06e-07;1!UBERON:0001785;1.06e-07;1!UBERON:0002464;1.06e-07;1!UBERON:0004904;1.06e-07;1!UBERON:0001021;1.06e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.18e-63,76;UBERON:0001474,1.01e-58,82;UBERON:0004765,3.75e-53,90;UBERON:0002405,2.62e-51,93;UBERON:0002390,1.75e-48,98;UBERON:0003061,1.75e-48,98;UBERON:0001434,1.98e-47,100;UBERON:0002193,1.32e-43,108;UBERON:0002204,1.26e-26,167;UBERON:0003081,4.50e-21,203;UBERON:0000926,7.60e-12,315;UBERON:0004120,7.60e-12,315;UBERON:0006603,7.60e-12,315;UBERON:0002384,2.85e-10,371;UBERON:0000941,1.14e-07,1;UBERON:0001785,1.14e-07,1;UBERON:0002464,1.14e-07,1;UBERON:0004904,1.14e-07,1;UBERON:0001021,1.14e-07,1;UBERON:0003902,1.14e-07,1;UBERON:0005425,1.14e-07,1 | |||
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| ||
|short_description=p@chr10:64374806..64374819,+ | |short_description=p@chr10:64374806..64374819,+ | ||
}} | }} |
Latest revision as of 14:40, 23 July 2015
Short description: | p@chr10:64374806..64374819, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:64374806..64374819, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.11e-112 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.11e-112 | 42 |
defensive cell | 7.54e-105 | 48 |
phagocyte | 7.54e-105 | 48 |
monopoietic cell | 5.58e-83 | 59 |
monocyte | 5.58e-83 | 59 |
monoblast | 5.58e-83 | 59 |
promonocyte | 5.58e-83 | 59 |
macrophage dendritic cell progenitor | 3.71e-80 | 61 |
myeloid lineage restricted progenitor cell | 7.76e-74 | 66 |
granulocyte monocyte progenitor cell | 1.10e-72 | 67 |
myeloid leukocyte | 2.04e-72 | 72 |
myeloid cell | 5.73e-47 | 108 |
common myeloid progenitor | 5.73e-47 | 108 |
nongranular leukocyte | 1.08e-40 | 115 |
hematopoietic lineage restricted progenitor cell | 8.13e-39 | 120 |
leukocyte | 2.10e-36 | 136 |
hematopoietic oligopotent progenitor cell | 4.76e-30 | 161 |
hematopoietic multipotent progenitor cell | 4.76e-30 | 161 |
hematopoietic stem cell | 1.32e-28 | 168 |
hematopoietic cell | 6.48e-27 | 177 |
mesenchymal cell | 5.20e-11 | 354 |
connective tissue cell | 1.07e-10 | 361 |
motile cell | 1.35e-09 | 386 |
multi fate stem cell | 3.02e-08 | 427 |
somatic stem cell | 4.63e-08 | 433 |
stem cell | 8.08e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.18e-63 | 76 |
bone element | 1.01e-58 | 82 |
skeletal element | 3.75e-53 | 90 |
immune system | 2.62e-51 | 93 |
hematopoietic system | 1.75e-48 | 98 |
blood island | 1.75e-48 | 98 |
skeletal system | 1.98e-47 | 100 |
hemolymphoid system | 1.32e-43 | 108 |
musculoskeletal system | 1.26e-26 | 167 |
lateral plate mesoderm | 4.50e-21 | 203 |
mesoderm | 7.60e-12 | 315 |
mesoderm-derived structure | 7.60e-12 | 315 |
presumptive mesoderm | 7.60e-12 | 315 |
connective tissue | 2.85e-10 | 371 |
cranial nerve II | 1.14e-07 | 1 |
cranial nerve | 1.14e-07 | 1 |
nerve trunk | 1.14e-07 | 1 |
nerve connecting eye with brain | 1.14e-07 | 1 |
nerve | 1.14e-07 | 1 |
retinal neural layer | 1.14e-07 | 1 |
presumptive neural retina | 1.14e-07 | 1 |