FFCP PHASE1:Hg19::chr10:5535609..5535633,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:5535609..5535633,- | |||
|coexpression_cluster_id=C2064 | |coexpression_cluster_id=C2064 | ||
|description=CAGE_peak_at_chr10:5535609..5535633,- | |description=CAGE_peak_at_chr10:5535609..5535633,- | ||
|id=chr10:5535609..5535633,- | |id=chr10:5535609..5535633,- | ||
|ontology_enrichment_celltype=CL:0002541!6.96e-12!3;CL:0000039!1.31e-11!7;CL:0000586!1.31e-11!7;CL:0002563!1.20e-09!4 | |ontology_enrichment_celltype=CL:0002541!6.96e-12!3;CL:0000039!1.31e-11!7;CL:0000586!1.31e-11!7;CL:0002563!1.20e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000039;7.57e-22;7!CL:0000586;7.57e-22;7!CL:0002563;9.51e-18;4!CL:0002253;1.22e-09;2!CL:0002231;7.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.05e-22,7;CL:0000586,7.05e-22,7;CL:0002563,9.51e-18,4;CL:0002253,1.22e-09,2;CL:0002231,7.28e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008425;8.72e-18;1!UBERON:0003124;1.57e-17;1 | |||
|ontology_enrichment_disease=DOID:5093!2.96e-34!4;DOID:1612!2.96e-34!4;DOID:0050687!1.69e-10!143;DOID:1799!4.87e-10!1;DOID:10165!4.87e-10!1;DOID:1798!4.87e-10!1;DOID:305!2.98e-09!106;DOID:299!2.49e-08!25;DOID:7!2.99e-07!39 | |ontology_enrichment_disease=DOID:5093!2.96e-34!4;DOID:1612!2.96e-34!4;DOID:0050687!1.69e-10!143;DOID:1799!4.87e-10!1;DOID:10165!4.87e-10!1;DOID:1798!4.87e-10!1;DOID:305!2.98e-09!106;DOID:299!2.49e-08!25;DOID:7!2.99e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:5093;8.65e-38;4!DOID:1612;8.65e-38;4!DOID:1799;4.83e-18;1!DOID:10165;4.83e-18;1!DOID:1798;4.83e-18;1!DOID:3095;2.26e-07;22!DOID:2994;2.26e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,9.81e-38,4;DOID:1612,9.81e-38,4;DOID:1799,4.44e-18,1;DOID:10165,4.44e-18,1;DOID:1798,4.44e-18,1;DOID:3095,2.21e-07,22;DOID:2994,2.21e-07,22;DOID:0050687,7.80e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000310!7.27e-14!10;UBERON:0001443!1.27e-12!11;UBERON:0000476!6.96e-12!3;UBERON:0000920!6.96e-12!3;UBERON:0003124!3.30e-11!7;UBERON:0001242!1.20e-09!4;UBERON:0001262!1.20e-09!4;UBERON:0004786!1.20e-09!4;UBERON:0004808!1.20e-09!4;UBERON:0001277!1.20e-09!4;UBERON:0003350!6.97e-08!5 | |ontology_enrichment_uberon=UBERON:0000310!7.27e-14!10;UBERON:0001443!1.27e-12!11;UBERON:0000476!6.96e-12!3;UBERON:0000920!6.96e-12!3;UBERON:0003124!3.30e-11!7;UBERON:0001242!1.20e-09!4;UBERON:0001262!1.20e-09!4;UBERON:0004786!1.20e-09!4;UBERON:0004808!1.20e-09!4;UBERON:0001277!1.20e-09!4;UBERON:0003350!6.97e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;9.51e-18;4!UBERON:0001262;9.51e-18;4!UBERON:0004786;9.51e-18;4!UBERON:0004808;9.51e-18;4!UBERON:0001277;9.51e-18;4!UBERON:0000310;1.43e-15;10!UBERON:0001443;3.23e-14;11!UBERON:0000485;1.46e-10;7!UBERON:0003929;1.46e-10;7!UBERON:0003350;2.35e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,9.51e-18,4;UBERON:0001262,9.51e-18,4;UBERON:0004786,9.51e-18,4;UBERON:0004808,9.51e-18,4;UBERON:0001277,9.51e-18,4;UBERON:0000310,1.50e-15,10;UBERON:0001443,3.37e-14,11;UBERON:0003350,2.35e-09,8;UBERON:0000485,2.05e-08,9 | |||
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|short_description=p@chr10:5535609..5535633,- | |short_description=p@chr10:5535609..5535633,- | ||
}} | }} |
Latest revision as of 14:12, 23 July 2015
Short description: | p@chr10:5535609..5535633, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5535609..5535633, - |
Coexpression cluster: | C2064_Intestinal_choriocarcinoma_breast_Prostate_pancreatic_colon_MCF7 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.05e-22 | 7 |
germ cell | 7.05e-22 | 7 |
intestinal epithelial cell | 9.51e-18 | 4 |
epithelial cell of large intestine | 1.22e-09 | 2 |
epithelial cell of prostate | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 9.51e-18 | 4 |
wall of intestine | 9.51e-18 | 4 |
gastrointestinal system mucosa | 9.51e-18 | 4 |
gastrointestinal system epithelium | 9.51e-18 | 4 |
intestinal epithelium | 9.51e-18 | 4 |
breast | 1.50e-15 | 10 |
chest | 3.37e-14 | 11 |
epithelium of mucosa | 2.35e-09 | 8 |
simple columnar epithelium | 2.05e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 9.81e-38 | 4 |
breast cancer | 9.81e-38 | 4 |
islet cell tumor | 4.44e-18 | 1 |
endocrine pancreas cancer | 4.44e-18 | 1 |
pancreatic endocrine carcinoma | 4.44e-18 | 1 |
germ cell and embryonal cancer | 2.21e-07 | 22 |
germ cell cancer | 2.21e-07 | 22 |
cell type cancer | 7.80e-07 | 143 |