FFCP PHASE1:Hg19::chr10:51489223..51489255,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:51489223..51489255,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_at_chr10:51489223..51489255,+ | |description=CAGE_peak_at_chr10:51489223..51489255,+ | ||
|id=chr10:51489223..51489255,+ | |id=chr10:51489223..51489255,+ | ||
|ontology_enrichment_celltype=CL:0000037!6.83e-24!172;CL:0000566!6.83e-24!172;CL:0000988!1.54e-22!182;CL:0002032!3.10e-22!165;CL:0000837!3.10e-22!165;CL:0000738!6.57e-19!140;CL:0002031!2.14e-15!124;CL:0002087!2.26e-13!119;CL:0000763!2.48e-12!112;CL:0000049!2.48e-12!112;CL:0000542!4.50e-10!53;CL:0000051!4.50e-10!53;CL:0000838!2.32e-09!52;CL:0000766!3.59e-09!76;CL:0000839!1.80e-07!70;CL:0000236!2.01e-07!14;CL:0002057!2.47e-07!42 | |ontology_enrichment_celltype=CL:0000037!6.83e-24!172;CL:0000566!6.83e-24!172;CL:0000988!1.54e-22!182;CL:0002032!3.10e-22!165;CL:0000837!3.10e-22!165;CL:0000738!6.57e-19!140;CL:0002031!2.14e-15!124;CL:0002087!2.26e-13!119;CL:0000763!2.48e-12!112;CL:0000049!2.48e-12!112;CL:0000542!4.50e-10!53;CL:0000051!4.50e-10!53;CL:0000838!2.32e-09!52;CL:0000766!3.59e-09!76;CL:0000839!1.80e-07!70;CL:0000236!2.01e-07!14;CL:0002057!2.47e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000771;1.77e-12;2!CL:0000094;6.92e-12;8!CL:0000097;6.89e-11;5!CL:0000775;6.80e-09;3!CL:0000081;1.15e-08;11!CL:0000037;4.51e-07;1!CL:0001024;4.51e-07;1!CL:0000236;6.93e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.58e-12,2;CL:0000094,6.46e-12,8;CL:0000037,3.22e-11,168;CL:0000097,6.78e-11,5;CL:0002028,6.78e-11,5;CL:0000988,2.04e-10,177;CL:0002032,1.93e-09,161;CL:0000837,1.93e-09,161;CL:0000775,6.67e-09,3;CL:0000081,1.10e-08,11;CL:0000738,3.80e-08,136;CL:0001024,4.25e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.42e-15!102;UBERON:0003061!6.42e-15!102;UBERON:0000178!5.33e-14!15;UBERON:0000179!5.33e-14!15;UBERON:0000463!5.33e-14!15;UBERON:0002193!1.91e-13!112 | |ontology_enrichment_uberon=UBERON:0002390!6.42e-15!102;UBERON:0003061!6.42e-15!102;UBERON:0000178!5.33e-14!15;UBERON:0000179!5.33e-14!15;UBERON:0000463!5.33e-14!15;UBERON:0002193!1.91e-13!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.72e-30;15!UBERON:0000179;3.72e-30;15!UBERON:0000463;3.72e-30;15!UBERON:0002390;5.45e-19;32!UBERON:0002193;5.53e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.92e-30,15;UBERON:0000179,3.92e-30,15;UBERON:0000463,3.92e-30,15;UBERON:0002390,2.13e-11,98;UBERON:0003061,2.13e-11,98;UBERON:0002193,4.81e-10,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,5.87200878669694,0,3.00816671205213,3.03815219002193,0,0.32389366601898,0,0.436194716338694,0,0.242584061187816,0.464858073811369,0,0,0.28769239232215,0,0,0.689491361473237,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0,0,0.580418477257168,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0.628975936525128,0,0,0.48217676009124,0,0.19891667719909,0,5.27988733383968,0,0.889509253863555,1.70692089026603,0.800791974072025,0.574752439954483,1.32208974556972,1.90810750907073,0,0.587237189370939,0,1.32171328579026,1.12101712596307,1.05353633910031,0.196709770113833,0,0.205601498999509,0,0,1.89379122293893,0,0,0,0.443067789167242,0,0.128091319725675,0,0.328875809207352,0.829050053357545,0,0,0,2.09071047609954,0,0,0.34362744548263,0.506039384039006,1.27426165729639,0,0,0,0.383959833463255,0,1.65744076430812,0.821127996921047,0,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,6.84182781284548,3.17063897517315,5.30218220390796,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,1.2937654491571,0.77005821767849,0,0,0,0,0,0,8.97484377612075,21.5496066986738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2942852049117,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1936378400364,20.6452045928441,18.2287099895732,17.3909196084186,13.1635927387582,18.8057260245888,7.56044012133361,21.4143797599453,0,0,0,0.185803175125719,0,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0.313359791546046,0,0,1.76646882614069,2.01799707191048,2.12923118845163,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,1.24271716604159,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0.132864840313363,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.549451649953598,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,5.87200878669694,0,3.00816671205213,3.03815219002193,0,0.32389366601898,0,0.436194716338694,0,0.242584061187816,0.464858073811369,0,0,0.28769239232215,0,0,0.689491361473237,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0,0,0.580418477257168,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0.628975936525128,0,0,0.48217676009124,0,0.19891667719909,0,5.27988733383968,0,0.889509253863555,1.70692089026603,0.800791974072025,0.574752439954483,1.32208974556972,1.90810750907073,0,0.587237189370939,0,1.32171328579026,1.12101712596307,1.05353633910031,0.196709770113833,0,0.205601498999509,0,0,1.89379122293893,0,0,0,0.443067789167242,0,0.128091319725675,0,0.328875809207352,0.829050053357545,0,0,0,2.09071047609954,0,0,0.34362744548263,0.506039384039006,1.27426165729639,0,0,0,0.383959833463255,0,1.65744076430812,0.821127996921047,0,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,6.84182781284548,3.17063897517315,5.30218220390796,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,1.2937654491571,0.77005821767849,0,0,0,0,0,0,8.97484377612075,21.5496066986738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2942852049117,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1936378400364,20.6452045928441,18.2287099895732,17.3909196084186,13.1635927387582,18.8057260245888,7.56044012133361,21.4143797599453,0,0,0,0.185803175125719,0,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0.313359791546046,0,0,1.76646882614069,2.01799707191048,2.12923118845163,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,1.24271716604159,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0.132864840313363,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.549451649953598,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:51489223..51489255,+ | |short_description=p@chr10:51489223..51489255,+ | ||
}} | }} |
Latest revision as of 14:03, 23 July 2015
Short description: | p@chr10:51489223..51489255, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:51489223..51489255, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.58e-12 | 2 |
granulocyte | 6.46e-12 | 8 |
hematopoietic stem cell | 3.22e-11 | 168 |
mast cell | 6.78e-11 | 5 |
basophil mast progenitor cell | 6.78e-11 | 5 |
hematopoietic cell | 2.04e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.93e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.93e-09 | 161 |
neutrophil | 6.67e-09 | 3 |
blood cell | 1.10e-08 | 11 |
leukocyte | 3.80e-08 | 136 |
CD34-positive, CD38-negative hematopoietic stem cell | 4.25e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 3.92e-30 | 15 |
haemolymphatic fluid | 3.92e-30 | 15 |
organism substance | 3.92e-30 | 15 |
hematopoietic system | 2.13e-11 | 98 |
blood island | 2.13e-11 | 98 |
hemolymphoid system | 4.81e-10 | 108 |