FFCP PHASE1:Hg19::chr10:28287763..28287778,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55130 | |EntrezGene=55130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=25583 | |HGNC=25583 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_uc009xky.2_5end | |association_with_transcript=12bp_to_uc009xky.2_5end | ||
|cluster_id=chr10:28287763..28287778,- | |||
|coexpression_cluster_id=C81 | |coexpression_cluster_id=C81 | ||
|description=CAGE_peak_7_at_ARMC4_5end | |description=CAGE_peak_7_at_ARMC4_5end | ||
|id=chr10:28287763..28287778,- | |id=chr10:28287763..28287778,- | ||
|ontology_enrichment_celltype=CL:0000243!8.62e-08!15;CL:0000125!8.62e-08!15;CL:0000030!8.62e-08!15;CL:0000339!8.62e-08!15 | |ontology_enrichment_celltype=CL:0000243!8.62e-08!15;CL:0000125!8.62e-08!15;CL:0000030!8.62e-08!15;CL:0000339!8.62e-08!15 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.12e-11;29!UBERON:0010122;3.18e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4231;3.18e-11;2!DOID:1907;3.18e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,4.09e-11,2;DOID:1907,4.09e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000955!6.79e-10!69;UBERON:0006238!6.79e-10!69;UBERON:0001017!1.57e-08!82;UBERON:0005743!8.96e-08!86;UBERON:0000073!1.36e-07!94;UBERON:0001016!1.36e-07!94 | |ontology_enrichment_uberon=UBERON:0000955!6.79e-10!69;UBERON:0006238!6.79e-10!69;UBERON:0001017!1.57e-08!82;UBERON:0005743!8.96e-08!86;UBERON:0000073!1.36e-07!94;UBERON:0001016!1.36e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;4.66e-21;1!UBERON:0006518;4.66e-21;1!UBERON:0008949;4.66e-21;1!UBERON:0000101;4.66e-21;1!UBERON:0002167;4.66e-21;1!UBERON:0003127;2.02e-11;2!UBERON:0000341;3.18e-11;2!UBERON:0000007;3.18e-11;2!UBERON:0001873;3.18e-11;2!UBERON:0002048;8.47e-09;22!UBERON:0000117;8.47e-09;22!UBERON:0000171;8.47e-09;22!UBERON:0000170;8.47e-09;22!UBERON:0005178;6.18e-08;34!UBERON:0002224;6.18e-08;34!UBERON:0001896;6.56e-08;3!UBERON:0005383;6.56e-08;3!UBERON:0005290;6.56e-08;3!UBERON:0005382;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.45e-21,1;UBERON:0006518,3.45e-21,1;UBERON:0008949,3.45e-21,1;UBERON:0000101,3.45e-21,1;UBERON:0002167,3.45e-21,1;UBERON:0003127,2.02e-11,2;UBERON:0001873,2.23e-11,2;UBERON:0010122,2.23e-11,2;UBERON:0000341,2.47e-11,2;UBERON:0000007,3.02e-11,2;UBERON:0005178,9.38e-10,34;UBERON:0002224,9.38e-10,34;UBERON:0005181,1.74e-09,35;UBERON:0002048,8.94e-09,22;UBERON:0000117,8.94e-09,22;UBERON:0000171,8.94e-09,22;UBERON:0000170,8.94e-09,22;UBERON:0005597,8.94e-09,22;UBERON:0000118,8.94e-09,22;UBERON:0008947,9.23e-09,38;UBERON:0003258,9.23e-09,38;UBERON:0005383,5.18e-08,3;UBERON:0005382,5.18e-08,3;UBERON:0001896,7.26e-08,3;UBERON:0005290,7.26e-08,3;UBERON:0010096,7.26e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.538168907066586,0,0,1.20036438433761,0.103052529238439,0.515281080091258,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426851060090485,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890469640183247,0,0.211125408127993,0,0,0,0.306806047506464,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.723578631752448,0,0.110579259931225,0,0,0.21787692703798,0,0.0769502585037971,0.455768223388005,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0,0,0,0,0,0.471807930864739,0,0.234264445725339,0,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.873633341210151,0.171986032471617,0,0,0,0.193978032976839,0,0.451961481561065,0,0.596143835108969,0,0,0.480952921509202,0,0.799238438328521,0.288180834308212,0.229073192331831,0,0,0.745515213392595,0,0.407712618220842,0.523014231561666,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0.517131825446202,0.39669780522807,0,0,1.06787412567695,6.28817220398664,1.24271716604159,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,1.14681839138014,0.665574309221114,0.124192805882767,0.138348634936231,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0,0.337884881306145,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.977734268540344,0.20170506870352,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,1.21393120847326,0.455324382702595,0,0,0.342976018874837,0,0,0.118193840883968,0,0.39246546425257,0.157115589916002,0,0,0,0,0,0.158013611732727,0,0,0.801711364730253,0,0,0,0,0.354996002191696,0.170426809518315,0,0.22910686854405,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0.454672189309436,0.267964130156178,0,0.103432995861895,0.213233981900981,1.42838658878244,0,0,0.560659312903067,0,0,0,0,0.0673520530145875,3.80127688581185,0.332660356546013,0.162806537221949,0.960546112899439,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p7@ARMC4 | |short_description=p7@ARMC4 | ||
}} | }} |
Latest revision as of 19:35, 17 September 2015
Short description: | p7@ARMC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ARMC4_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 12bp_to_uc009xky.2_5end |
EntrezGene: | ARMC4 |
HGNC: | 25583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.45e-21 | 1 |
right lung lobe | 3.45e-21 | 1 |
lower lobe of lung | 3.45e-21 | 1 |
lobe of lung | 3.45e-21 | 1 |
right lung | 3.45e-21 | 1 |
open tracheal system trachea | 2.02e-11 | 2 |
caudate nucleus | 2.23e-11 | 2 |
future caudate nucleus | 2.23e-11 | 2 |
throat | 2.47e-11 | 2 |
pituitary gland | 3.02e-11 | 2 |
thoracic cavity element | 9.38e-10 | 34 |
thoracic cavity | 9.38e-10 | 34 |
thoracic segment organ | 1.74e-09 | 35 |
lung | 8.94e-09 | 22 |
respiratory tube | 8.94e-09 | 22 |
respiration organ | 8.94e-09 | 22 |
pair of lungs | 8.94e-09 | 22 |
lung primordium | 8.94e-09 | 22 |
lung bud | 8.94e-09 | 22 |
respiratory primordium | 9.23e-09 | 38 |
endoderm of foregut | 9.23e-09 | 38 |
caudate-putamen | 5.18e-08 | 3 |
dorsal striatum | 5.18e-08 | 3 |
medulla oblongata | 7.26e-08 | 3 |
myelencephalon | 7.26e-08 | 3 |
future myelencephalon | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 4.09e-11 | 2 |
malignant fibroxanthoma | 4.09e-11 | 2 |