FFCP PHASE1:Hg19::chr10:129871634..129871645,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:129871634..129871645,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_at_chr10:129871634..129871645,+ | |description=CAGE_peak_at_chr10:129871634..129871645,+ | ||
|id=chr10:129871634..129871645,+ | |id=chr10:129871634..129871645,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.79e-49!42;CL:0000860!2.80e-47!45;CL:0000766!2.98e-47!76;CL:0002194!2.56e-45!63;CL:0000576!2.56e-45!63;CL:0000040!2.56e-45!63;CL:0000559!2.56e-45!63;CL:0002009!1.95e-43!65;CL:0000839!3.31e-39!70;CL:0000557!1.97e-38!71;CL:0000738!4.62e-35!140;CL:0002087!1.31e-33!119;CL:0000763!4.27e-33!112;CL:0000049!4.27e-33!112;CL:0000037!6.04e-30!172;CL:0000566!6.04e-30!172;CL:0002031!1.73e-27!124;CL:0002032!1.92e-27!165;CL:0000837!1.92e-27!165;CL:0000988!4.54e-27!182;CL:0000134!4.09e-08!358;CL:0002320!1.38e-07!365;CL:0002393!1.39e-07!9;CL:0002397!1.39e-07!9;CL:0000094!1.72e-07!8;CL:0000219!3.78e-07!390 | |ontology_enrichment_celltype=CL:0002057!2.79e-49!42;CL:0000860!2.80e-47!45;CL:0000766!2.98e-47!76;CL:0002194!2.56e-45!63;CL:0000576!2.56e-45!63;CL:0000040!2.56e-45!63;CL:0000559!2.56e-45!63;CL:0002009!1.95e-43!65;CL:0000839!3.31e-39!70;CL:0000557!1.97e-38!71;CL:0000738!4.62e-35!140;CL:0002087!1.31e-33!119;CL:0000763!4.27e-33!112;CL:0000049!4.27e-33!112;CL:0000037!6.04e-30!172;CL:0000566!6.04e-30!172;CL:0002031!1.73e-27!124;CL:0002032!1.92e-27!165;CL:0000837!1.92e-27!165;CL:0000988!4.54e-27!182;CL:0000134!4.09e-08!358;CL:0002320!1.38e-07!365;CL:0002393!1.39e-07!9;CL:0002397!1.39e-07!9;CL:0000094!1.72e-07!8;CL:0000219!3.78e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.24e-72;33!CL:0002057;8.24e-72;33!CL:0000473;1.54e-63;39!CL:0000234;1.54e-63;39!CL:0000576;5.89e-39;48!CL:0000766;6.48e-25;69!CL:0000763;1.30e-16;100!CL:0000771;1.28e-14;2!CL:0000094;4.00e-14;8!CL:0000738;5.14e-12;136!CL:0000775;1.92e-10;3!CL:0000081;2.62e-10;11!CL:0002087;4.75e-10;104!CL:0000988;9.23e-08;177!CL:0000219;9.29e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.23e-77,72;CL:0000473,3.15e-75,48;CL:0000234,3.15e-75,48;CL:0000860,1.43e-72,42;CL:0002057,1.43e-72,42;CL:0002194,3.02e-70,59;CL:0000576,3.02e-70,59;CL:0000040,3.02e-70,59;CL:0000559,3.02e-70,59;CL:0002009,7.76e-68,61;CL:0000839,1.93e-62,66;CL:0000557,1.86e-61,67;CL:0000763,1.81e-50,108;CL:0000049,1.81e-50,108;CL:0000738,3.43e-39,136;CL:0002087,3.84e-34,115;CL:0002031,1.53e-32,120;CL:0002032,2.09e-32,161;CL:0000837,2.09e-32,161;CL:0000037,7.25e-31,168;CL:0000988,4.62e-29,177;CL:0000771,1.12e-14,2;CL:0000094,3.75e-14,8;CL:0000134,4.30e-12,354;CL:0002320,9.24e-12,361;CL:0000219,1.38e-10,386;CL:0000775,1.92e-10,3;CL:0000081,2.50e-10,11;CL:0000048,3.78e-09,427;CL:0000723,5.97e-09,433;CL:0000034,1.08e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.35e-53;42!CL:0000049;3.37e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.30e-34!102;UBERON:0003061!1.30e-34!102;UBERON:0002371!5.62e-34!80;UBERON:0002193!1.08e-32!112;UBERON:0001474!1.68e-30!86;UBERON:0004765!7.55e-25!101;UBERON:0001434!7.55e-25!101;UBERON:0002405!1.96e-23!115;UBERON:0003081!3.03e-14!216;UBERON:0002204!1.04e-10!167;UBERON:0002384!7.03e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!1.30e-34!102;UBERON:0003061!1.30e-34!102;UBERON:0002371!5.62e-34!80;UBERON:0002193!1.08e-32!112;UBERON:0001474!1.68e-30!86;UBERON:0004765!7.55e-25!101;UBERON:0001434!7.55e-25!101;UBERON:0002405!1.96e-23!115;UBERON:0003081!3.03e-14!216;UBERON:0002204!1.04e-10!167;UBERON:0002384!7.03e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.52e-54,76;UBERON:0001474,1.55e-49,82;UBERON:0004765,8.81e-45,90;UBERON:0002405,3.31e-43,93;UBERON:0002390,8.55e-41,98;UBERON:0003061,8.55e-41,98;UBERON:0001434,6.77e-40,100;UBERON:0002193,1.25e-36,108;UBERON:0002204,3.94e-22,167;UBERON:0003081,2.18e-17,203;UBERON:0002384,2.63e-11,371;UBERON:0000926,1.64e-09,315;UBERON:0004120,1.64e-09,315;UBERON:0006603,1.64e-09,315 | |||
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|short_description=p@chr10:129871634..129871645,+ | |short_description=p@chr10:129871634..129871645,+ | ||
}} | }} |
Latest revision as of 11:38, 23 July 2015
Short description: | p@chr10:129871634..129871645, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129871634..129871645, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.23e-77 | 72 |
defensive cell | 3.15e-75 | 48 |
phagocyte | 3.15e-75 | 48 |
classical monocyte | 1.43e-72 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-72 | 42 |
monopoietic cell | 3.02e-70 | 59 |
monocyte | 3.02e-70 | 59 |
monoblast | 3.02e-70 | 59 |
promonocyte | 3.02e-70 | 59 |
macrophage dendritic cell progenitor | 7.76e-68 | 61 |
myeloid lineage restricted progenitor cell | 1.93e-62 | 66 |
granulocyte monocyte progenitor cell | 1.86e-61 | 67 |
myeloid cell | 1.81e-50 | 108 |
common myeloid progenitor | 1.81e-50 | 108 |
leukocyte | 3.43e-39 | 136 |
nongranular leukocyte | 3.84e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 1.53e-32 | 120 |
hematopoietic oligopotent progenitor cell | 2.09e-32 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-32 | 161 |
hematopoietic stem cell | 7.25e-31 | 168 |
hematopoietic cell | 4.62e-29 | 177 |
eosinophil | 1.12e-14 | 2 |
granulocyte | 3.75e-14 | 8 |
mesenchymal cell | 4.30e-12 | 354 |
connective tissue cell | 9.24e-12 | 361 |
motile cell | 1.38e-10 | 386 |
neutrophil | 1.92e-10 | 3 |
blood cell | 2.50e-10 | 11 |
multi fate stem cell | 3.78e-09 | 427 |
somatic stem cell | 5.97e-09 | 433 |
stem cell | 1.08e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.52e-54 | 76 |
bone element | 1.55e-49 | 82 |
skeletal element | 8.81e-45 | 90 |
immune system | 3.31e-43 | 93 |
hematopoietic system | 8.55e-41 | 98 |
blood island | 8.55e-41 | 98 |
skeletal system | 6.77e-40 | 100 |
hemolymphoid system | 1.25e-36 | 108 |
musculoskeletal system | 3.94e-22 | 167 |
lateral plate mesoderm | 2.18e-17 | 203 |
connective tissue | 2.63e-11 | 371 |
mesoderm | 1.64e-09 | 315 |
mesoderm-derived structure | 1.64e-09 | 315 |
presumptive mesoderm | 1.64e-09 | 315 |