FFCP PHASE1:Hg19::chr17:76130076..76130100,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:76130076..76130100,-
|short_description=p@chr17:76130076..76130100,-
|description=CAGE_peak_at_chr17:76130076..76130100,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:76130076..76130100,- | |||
|coexpression_cluster_id=C359 | |||
|description=CAGE_peak_at_chr17:76130076..76130100,- | |||
|id=chr17:76130076..76130100,- | |||
|ontology_enrichment_celltype=CL:0000838!1.41e-31!52;CL:0000542!7.62e-31!53;CL:0000051!7.62e-31!53;CL:0000945!2.12e-21!24;CL:0000826!2.12e-21!24;CL:0002087!3.27e-19!119;CL:0000738!2.47e-17!140;CL:0002031!1.68e-15!124;CL:0000084!4.70e-14!25;CL:0000827!4.70e-14!25;CL:0000037!2.12e-13!172;CL:0000566!2.12e-13!172;CL:0000624!1.96e-12!6;CL:0000988!3.62e-12!182;CL:0000791!8.88e-12!18;CL:0000789!8.88e-12!18;CL:0002420!8.88e-12!18;CL:0002419!8.88e-12!18;CL:0000790!8.88e-12!18;CL:0002032!2.01e-11!165;CL:0000837!2.01e-11!165;CL:0000842!3.62e-09!3;CL:0000224!5.70e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.01e-33;24!CL:0000946;2.93e-23;1!CL:0000786;2.93e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.43e-33,24;CL:0000826,4.43e-33,24;CL:0000946,2.10e-23,1;CL:0000786,2.10e-23,1;CL:0000980,2.10e-23,1;CL:0000838,2.42e-15,52;CL:0000542,4.71e-15,53;CL:0000051,4.71e-15,53;CL:0000785,2.07e-12,2;CL:0000955,2.07e-12,2;CL:0000818,2.07e-12,2;CL:0000954,2.07e-12,2;CL:0000816,2.07e-12,2;CL:0000817,1.04e-08,3;CL:0000236,3.04e-07,14;CL:0002087,7.49e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000954;2.45e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.06e-23;1!DOID:0050177;1.06e-23;1!DOID:0050427;1.06e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.07e-23,1;DOID:0050177,1.07e-23,1;DOID:0050427,1.07e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.13e-11!15;UBERON:0000179!1.13e-11!15;UBERON:0000463!1.13e-11!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.17e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.12e-08,3;UBERON:0004854,1.12e-08,3;UBERON:0009034,1.12e-08,3;UBERON:0002095,1.12e-08,3;UBERON:0004782,1.12e-08,3;UBERON:0003281,1.12e-08,3;UBERON:0009664,1.12e-08,3;UBERON:0002296,1.12e-08,3;UBERON:0005602,1.12e-08,3;UBERON:0001179,1.12e-08,3;UBERON:0006293,1.12e-08,3 | |||
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| ||
|short_description=p@chr17:76130076..76130100,- | |||
}} | }} |
Latest revision as of 21:53, 25 July 2015
Short description: | p@chr17:76130076..76130100, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76130076..76130100, - |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.43e-33 | 24 |
pro-B cell | 4.43e-33 | 24 |
antibody secreting cell | 2.10e-23 | 1 |
plasma cell | 2.10e-23 | 1 |
plasmablast | 2.10e-23 | 1 |
lymphoid lineage restricted progenitor cell | 2.42e-15 | 52 |
lymphocyte | 4.71e-15 | 53 |
common lymphoid progenitor | 4.71e-15 | 53 |
mature B cell | 2.07e-12 | 2 |
pre-B-II cell | 2.07e-12 | 2 |
transitional stage B cell | 2.07e-12 | 2 |
small pre-B-II cell | 2.07e-12 | 2 |
immature B cell | 2.07e-12 | 2 |
precursor B cell | 1.04e-08 | 3 |
B cell | 3.04e-07 | 14 |
nongranular leukocyte | 7.49e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.12e-08 | 3 |
gastrointestinal system mesentery | 1.12e-08 | 3 |
stomach region | 1.12e-08 | 3 |
mesentery | 1.12e-08 | 3 |
gastrointestinal system serosa | 1.12e-08 | 3 |
mesentery of stomach | 1.12e-08 | 3 |
gut mesentery | 1.12e-08 | 3 |
dorsal mesentery | 1.12e-08 | 3 |
dorsal mesogastrium | 1.12e-08 | 3 |
peritoneal cavity | 1.12e-08 | 3 |
spleen primordium | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.07e-23 | 1 |
monogenic disease | 1.07e-23 | 1 |
xeroderma pigmentosum | 1.07e-23 | 1 |