FFCP PHASE1:Hg19::chr17:76124788..76124804,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:76124788..76124804,-
|short_description=p3@TMC6
|description=CAGE_peak_3_at_TMC6_5end
|association_with_transcript=48bp_to_uc010dhf.1_5end
|EntrezGene=11...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11322 | |EntrezGene=11322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18021 | |HGNC=18021 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L2M4 | |UniProt=Q7L2M4 | ||
|association_with_transcript=48bp_to_uc010dhf.1_5end | |||
|cluster_id=chr17:76124788..76124804,- | |||
|coexpression_cluster_id=C3690 | |||
|description=CAGE_peak_3_at_TMC6_5end | |||
|id=chr17:76124788..76124804,- | |||
|ontology_enrichment_celltype=CL:0000037!1.89e-51!172;CL:0000566!1.89e-51!172;CL:0002032!3.19e-50!165;CL:0000837!3.19e-50!165;CL:0000988!3.90e-49!182;CL:0000738!2.09e-41!140;CL:0002087!1.44e-35!119;CL:0002031!5.35e-35!124;CL:0000763!2.17e-34!112;CL:0000049!2.17e-34!112;CL:0000766!9.18e-26!76;CL:0000839!8.39e-22!70;CL:0000557!7.88e-21!71;CL:0002194!4.83e-20!63;CL:0000576!4.83e-20!63;CL:0000040!4.83e-20!63;CL:0000559!4.83e-20!63;CL:0002009!2.65e-19!65;CL:0002057!5.24e-18!42;CL:0000860!2.28e-17!45;CL:0000542!1.19e-13!53;CL:0000051!1.19e-13!53;CL:0000838!1.87e-13!52;CL:0000791!8.24e-11!18;CL:0000789!8.24e-11!18;CL:0002420!8.24e-11!18;CL:0002419!8.24e-11!18;CL:0000790!8.24e-11!18;CL:0000084!1.12e-09!25;CL:0000827!1.12e-09!25;CL:0000625!1.24e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.84e-14;39!CL:0000234;3.84e-14;39!CL:0000860;2.92e-13;33!CL:0002057;2.92e-13;33!CL:0000576;3.41e-13;48!CL:0000766;5.74e-13;69!CL:0000791;1.00e-11;18!CL:0000789;1.00e-11;18!CL:0002419;1.00e-11;18!CL:0000763;1.34e-11;100!CL:0002087;8.68e-11;104!CL:0000084;1.49e-09;25!CL:0000988;3.07e-09;177!CL:0000738;4.10e-09;136!CL:0000625;3.64e-08;11!CL:0000542;2.07e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.08e-53,168;CL:0002032,7.71e-53,161;CL:0000837,7.71e-53,161;CL:0000988,2.01e-50,177;CL:0000738,1.17e-42,136;CL:0000763,2.50e-38,108;CL:0000049,2.50e-38,108;CL:0002087,5.53e-38,115;CL:0002031,1.36e-36,120;CL:0000766,3.72e-30,72;CL:0000839,1.16e-25,66;CL:0002194,9.06e-24,59;CL:0000576,9.06e-24,59;CL:0000040,9.06e-24,59;CL:0000559,9.06e-24,59;CL:0000557,9.95e-24,67;CL:0000473,4.09e-23,48;CL:0000234,4.09e-23,48;CL:0002009,4.53e-22,61;CL:0000860,1.26e-19,42;CL:0002057,1.26e-19,42;CL:0000542,1.18e-12,53;CL:0000051,1.18e-12,53;CL:0000838,1.93e-12,52;CL:0000791,1.01e-11,18;CL:0000789,1.01e-11,18;CL:0002420,1.01e-11,18;CL:0002419,1.01e-11,18;CL:0000790,1.01e-11,18;CL:0000084,1.06e-09,25;CL:0000827,1.06e-09,25;CL:0000625,3.12e-08,11;CL:0002393,8.77e-07,9;CL:0002397,8.77e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-14;42!CL:0000790;1.00e-11;18!CL:0000049;2.36e-11;108!CL:0000051;2.07e-07;53 | |||
|ontology_enrichment_disease=DOID:8692!8.91e-09!31;DOID:1240!9.59e-09!39;DOID:2531!5.61e-07!51;DOID:0060083!5.61e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.91e-09;31!DOID:1240;3.69e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.10e-09,31;DOID:1240,8.83e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.67e-22!102;UBERON:0003061!3.67e-22!102;UBERON:0002193!1.48e-20!112;UBERON:0002371!1.84e-15!80;UBERON:0002405!9.63e-13!115;UBERON:0001474!1.58e-12!86;UBERON:0004765!1.92e-08!101;UBERON:0001434!1.92e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.90e-25,98;UBERON:0003061,1.90e-25,98;UBERON:0002193,6.27e-23,108;UBERON:0002371,3.42e-18,76;UBERON:0002405,9.57e-18,93;UBERON:0001474,7.53e-15,82;UBERON:0004765,5.78e-13,90;UBERON:0001434,3.16e-09,100 | |||
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| ||
|short_description=p3@TMC6 | |||
}} | }} |
Latest revision as of 20:22, 17 September 2015
Short description: | p3@TMC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMC6_5end |
Coexpression cluster: | C3690_CD4_CD14CD16_optic_substantia_acute_Eosinophils_migratory |
Association with transcript: | 48bp_to_uc010dhf.1_5end |
EntrezGene: | TMC6 |
HGNC: | 18021 |
UniProt: | Q7L2M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.90e-25 | 98 |
blood island | 1.90e-25 | 98 |
hemolymphoid system | 6.27e-23 | 108 |
bone marrow | 3.42e-18 | 76 |
immune system | 9.57e-18 | 93 |
bone element | 7.53e-15 | 82 |
skeletal element | 5.78e-13 | 90 |
skeletal system | 3.16e-09 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.10e-09 | 31 |
leukemia | 8.83e-09 | 39 |