FFCP PHASE1:Hg19::chr10:119307702..119307723,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2018 | |EntrezGene=2018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3341 | |HGNC=3341 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_BC010043_5end | |association_with_transcript=-39bp_to_BC010043_5end | ||
|cluster_id=chr10:119307702..119307723,+ | |||
|coexpression_cluster_id=C718 | |coexpression_cluster_id=C718 | ||
|description=CAGE_peak_10_at_EMX2_5end | |description=CAGE_peak_10_at_EMX2_5end | ||
|id=chr10:119307702..119307723,+ | |id=chr10:119307702..119307723,+ | ||
|ontology_enrichment_celltype=CL:0002620!4.42e-12!23 | |ontology_enrichment_celltype=CL:0002620!4.42e-12!23 | ||
|ontology_enrichment_celltype_v019=CL:0002605;6.94e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.20e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.28e-13;10!UBERON:0007297;2.27e-12;2!UBERON:0005754;4.20e-07;1!UBERON:0000358;6.23e-07;1 | |||
|ontology_enrichment_disease=DOID:17!7.57e-08!5;DOID:450!7.57e-08!5;DOID:66!7.57e-08!5;DOID:423!7.57e-08!5;DOID:0080000!7.57e-08!5;DOID:11722!7.57e-08!5 | |ontology_enrichment_disease=DOID:17!7.57e-08!5;DOID:450!7.57e-08!5;DOID:66!7.57e-08!5;DOID:423!7.57e-08!5;DOID:0080000!7.57e-08!5;DOID:11722!7.57e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.06e-08;3!DOID:127;2.06e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.92e-08,3;DOID:127,1.92e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001893!8.20e-28!34;UBERON:0001869!8.66e-28!32;UBERON:0002020!1.51e-27!34;UBERON:0003528!1.51e-27!34;UBERON:0002791!8.50e-27!33;UBERON:0002780!3.74e-25!41;UBERON:0001890!3.74e-25!41;UBERON:0006240!3.74e-25!41;UBERON:0003080!2.53e-24!42;UBERON:0002616!5.90e-23!59;UBERON:0001049!1.00e-22!57;UBERON:0005068!1.00e-22!57;UBERON:0006241!1.00e-22!57;UBERON:0007135!1.00e-22!57;UBERON:0000956!2.78e-22!25;UBERON:0000203!2.78e-22!25;UBERON:0001017!5.99e-22!82;UBERON:0005743!2.41e-21!86;UBERON:0000955!5.20e-20!69;UBERON:0006238!5.20e-20!69;UBERON:0003056!1.00e-19!61;UBERON:0000073!5.88e-19!94;UBERON:0001016!5.88e-19!94;UBERON:0002619!9.40e-19!22;UBERON:0007023!2.61e-18!115;UBERON:0003075!6.04e-17!86;UBERON:0007284!6.04e-17!86;UBERON:0002346!7.63e-17!90;UBERON:0001950!4.17e-16!20;UBERON:0002199!8.61e-14!45;UBERON:0002416!8.61e-14!45;UBERON:0000153!9.71e-12!129;UBERON:0007811!9.71e-12!129;UBERON:0000924!1.11e-11!173;UBERON:0006601!1.11e-11!173;UBERON:0004121!1.51e-11!169;UBERON:0000033!1.63e-11!123;UBERON:0000475!2.70e-11!365;UBERON:0002097!5.38e-11!40;UBERON:0001871!9.66e-09!7;UBERON:0000349!2.72e-08!5;UBERON:0002420!1.97e-07!9;UBERON:0007245!1.97e-07!9;UBERON:0010009!1.97e-07!9;UBERON:0010011!1.97e-07!9;UBERON:0000454!1.97e-07!9;UBERON:0002308!8.71e-07!9;UBERON:0000125!8.71e-07!9 | |ontology_enrichment_uberon=UBERON:0001893!8.20e-28!34;UBERON:0001869!8.66e-28!32;UBERON:0002020!1.51e-27!34;UBERON:0003528!1.51e-27!34;UBERON:0002791!8.50e-27!33;UBERON:0002780!3.74e-25!41;UBERON:0001890!3.74e-25!41;UBERON:0006240!3.74e-25!41;UBERON:0003080!2.53e-24!42;UBERON:0002616!5.90e-23!59;UBERON:0001049!1.00e-22!57;UBERON:0005068!1.00e-22!57;UBERON:0006241!1.00e-22!57;UBERON:0007135!1.00e-22!57;UBERON:0000956!2.78e-22!25;UBERON:0000203!2.78e-22!25;UBERON:0001017!5.99e-22!82;UBERON:0005743!2.41e-21!86;UBERON:0000955!5.20e-20!69;UBERON:0006238!5.20e-20!69;UBERON:0003056!1.00e-19!61;UBERON:0000073!5.88e-19!94;UBERON:0001016!5.88e-19!94;UBERON:0002619!9.40e-19!22;UBERON:0007023!2.61e-18!115;UBERON:0003075!6.04e-17!86;UBERON:0007284!6.04e-17!86;UBERON:0002346!7.63e-17!90;UBERON:0001950!4.17e-16!20;UBERON:0002199!8.61e-14!45;UBERON:0002416!8.61e-14!45;UBERON:0000153!9.71e-12!129;UBERON:0007811!9.71e-12!129;UBERON:0000924!1.11e-11!173;UBERON:0006601!1.11e-11!173;UBERON:0004121!1.51e-11!169;UBERON:0000033!1.63e-11!123;UBERON:0000475!2.70e-11!365;UBERON:0002097!5.38e-11!40;UBERON:0001871!9.66e-09!7;UBERON:0000349!2.72e-08!5;UBERON:0002420!1.97e-07!9;UBERON:0007245!1.97e-07!9;UBERON:0010009!1.97e-07!9;UBERON:0010011!1.97e-07!9;UBERON:0000454!1.97e-07!9;UBERON:0002308!8.71e-07!9;UBERON:0000125!8.71e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.03e-17;3!UBERON:0004054;1.03e-17;3!UBERON:0004175;1.30e-15;21!UBERON:0000956;5.06e-15;25!UBERON:0000203;5.06e-15;25!UBERON:0002791;1.85e-13;32!UBERON:0001869;2.00e-13;32!UBERON:0005904;2.07e-13;4!UBERON:0003528;1.06e-12;34!UBERON:0002020;1.06e-12;34!UBERON:0001893;2.71e-12;34!UBERON:0001954;6.46e-12;2!UBERON:0003022;6.46e-12;2!UBERON:0002421;6.46e-12;2!UBERON:0002600;6.46e-12;2!UBERON:0002619;1.61e-10;22!UBERON:0000349;3.01e-10;5!UBERON:0000995;8.70e-08;17!UBERON:0003975;2.44e-07;18!UBERON:0002780;3.77e-07;41!UBERON:0001890;3.77e-07;41!UBERON:0000998;4.20e-07;1!UBERON:0006868;4.20e-07;1!UBERON:0001000;4.70e-07;1!UBERON:0005352;4.70e-07;1!UBERON:0005795;6.23e-07;1!UBERON:0006834;6.23e-07;1!UBERON:0001301;6.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,9.57e-18,3;UBERON:0004054,9.57e-18,3;UBERON:0000956,5.32e-15,25;UBERON:0000203,5.32e-15,25;UBERON:0002791,3.01e-14,32;UBERON:0001869,3.01e-14,32;UBERON:0005904,1.96e-13,4;UBERON:0003528,2.49e-13,34;UBERON:0002020,2.49e-13,34;UBERON:0001893,2.49e-13,34;UBERON:0004175,5.84e-13,25;UBERON:0001954,1.00e-11,2;UBERON:0003022,1.00e-11,2;UBERON:0002421,1.00e-11,2;UBERON:0002600,1.00e-11,2;UBERON:0002780,8.31e-11,41;UBERON:0001890,8.31e-11,41;UBERON:0003080,8.31e-11,41;UBERON:0006240,8.31e-11,41;UBERON:0002619,1.66e-10,22;UBERON:0000349,3.71e-10,5;UBERON:0005795,2.15e-08,22;UBERON:0001017,4.04e-08,81;UBERON:0000073,5.20e-08,53;UBERON:0002616,5.20e-08,53;UBERON:0001049,1.69e-07,56;UBERON:0005068,1.69e-07,56;UBERON:0006241,1.69e-07,56;UBERON:0007135,1.69e-07,56;UBERON:0007023,2.00e-07,114;UBERON:0000998,4.09e-07,1;UBERON:0006868,4.09e-07,1;UBERON:0001016,4.43e-07,89;UBERON:0000955,4.81e-07,68;UBERON:0006238,4.81e-07,68;UBERON:0001000,4.85e-07,1;UBERON:0005352,4.85e-07,1;UBERON:0001301,5.75e-07,1;UBERON:0006834,6.08e-07,1;UBERON:0003056,9.38e-07,61 | |||
|phase1_expression=0,0.856402095563933,0,2.00146596706261,0,0,0,0.631719873426831,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,1.50561867580173,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.747243402759005,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.717558542755448,1.2813443329114,1.90738711043606,0.900273288253207,0.309157587715317,0.257640540045629,1.11670113798954,0.506328996723799,0.194874010322397,1.00973509697646,1.10459878370759,0.969876340912871,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.201057944823262,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,1.86156681609409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,1.52456774533478,0,0.773288812777695,0.167516265334349,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0,0,0.462629081407967,0.177561725313127,0.246381468041427,0,0.232420756919918,0,0.200506470303285,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.987884678879706,0.379473173765715,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,1.40669416410513,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,1.20598527610407,0,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0.885741385813839,0.723578631752448,0,0.110579259931225,0,0.219385397153973,0,0,1.46205491157214,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,1.73110911793673,0,0,0,0,0,0,0.539209063845416,0,0.468528891450678,0,0,0,3.94584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,1.38847790668105,0,0,2.44617335538842,0.51595809741485,0,0,0,0,0,0.451961481561065,0,0,0.316553979779393,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,3.97614844904652,1.0896272488926,0,0,0,0,0,0.485996453264197,0,1.49730843868477,1.20645552710496,0,0,0,0,0,0,2.71499800876856,0.864221491201268,2.28611152076586,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,4.02686674176478,0.876336514945499,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0.144921028610825,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,1.37358282073117,1.01024846629776,0,0,0,0,0,0,0,0.895444205407437,0.308801447160972,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,1.75597244962866,0.41023272848151,0.756215088665154,0.138314504928436,0.968853873791107,0,0,0,0,0,0,0,0.397832444232549,0.451261970095544,0,0,0,0,0,0.405225507710368,1.56215619722769,1.03343398250592,0.317079050969534,0,0,0.992422356778588,2.46219742103469,0,0,0,0,0,0,0,0,0.0679697329768317,0.263091094251396,0,0,0,1.57115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,4.23387050190929,0.4582137370881,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0.485710993059139,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0.872701380680755,0,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0.530450887527676,0.267964130156178,0,0.517164979309476,0.639701945702943,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,2.34640942403454,2.44482888365733,2.03448089157869,0,0,0 | |phase1_expression=0,0.856402095563933,0,2.00146596706261,0,0,0,0.631719873426831,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,1.50561867580173,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.747243402759005,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.717558542755448,1.2813443329114,1.90738711043606,0.900273288253207,0.309157587715317,0.257640540045629,1.11670113798954,0.506328996723799,0.194874010322397,1.00973509697646,1.10459878370759,0.969876340912871,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.201057944823262,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,1.86156681609409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,1.52456774533478,0,0.773288812777695,0.167516265334349,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0,0,0.462629081407967,0.177561725313127,0.246381468041427,0,0.232420756919918,0,0.200506470303285,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.987884678879706,0.379473173765715,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,1.40669416410513,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,1.20598527610407,0,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0.885741385813839,0.723578631752448,0,0.110579259931225,0,0.219385397153973,0,0,1.46205491157214,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,1.73110911793673,0,0,0,0,0,0,0.539209063845416,0,0.468528891450678,0,0,0,3.94584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,1.38847790668105,0,0,2.44617335538842,0.51595809741485,0,0,0,0,0,0.451961481561065,0,0,0.316553979779393,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,3.97614844904652,1.0896272488926,0,0,0,0,0,0.485996453264197,0,1.49730843868477,1.20645552710496,0,0,0,0,0,0,2.71499800876856,0.864221491201268,2.28611152076586,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,4.02686674176478,0.876336514945499,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0.144921028610825,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,1.37358282073117,1.01024846629776,0,0,0,0,0,0,0,0.895444205407437,0.308801447160972,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,1.75597244962866,0.41023272848151,0.756215088665154,0.138314504928436,0.968853873791107,0,0,0,0,0,0,0,0.397832444232549,0.451261970095544,0,0,0,0,0,0.405225507710368,1.56215619722769,1.03343398250592,0.317079050969534,0,0,0.992422356778588,2.46219742103469,0,0,0,0,0,0,0,0,0.0679697329768317,0.263091094251396,0,0,0,1.57115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,4.23387050190929,0.4582137370881,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0.485710993059139,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0.872701380680755,0,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0.530450887527676,0.267964130156178,0,0.517164979309476,0.639701945702943,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,2.34640942403454,2.44482888365733,2.03448089157869,0,0,0 | ||
|short_description=p10@EMX2 | |short_description=p10@EMX2 | ||
}} | }} |
Latest revision as of 15:56, 16 September 2015
Short description: | p10@EMX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EMX2_5end |
Coexpression cluster: | C718_epididymis_seminal_uterus_cervix_ductus_peripheral_colon |
Association with transcript: | -39bp_to_BC010043_5end |
EntrezGene: | EMX2 |
HGNC: | 3341 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.20e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.92e-08 | 3 |
leiomyoma | 1.92e-08 | 3 |