FFCP PHASE1:Hg19::chr10:112523532..112523536,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:112523532..112523536,+ | |||
|coexpression_cluster_id=C1104 | |coexpression_cluster_id=C1104 | ||
|description=CAGE_peak_at_chr10:112523532..112523536,+ | |description=CAGE_peak_at_chr10:112523532..112523536,+ | ||
|id=chr10:112523532..112523536,+ | |id=chr10:112523532..112523536,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000082;3.15e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,3.51e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0004140;6.93e-16;1!UBERON:0000358;1.07e-15;1 | |||
|ontology_enrichment_disease=DOID:5409!6.22e-08!4 | |ontology_enrichment_disease=DOID:5409!6.22e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:114;1.66e-29;2!DOID:0050619;1.07e-15;1!DOID:1357;1.07e-15;1!DOID:178;2.38e-15;1!DOID:326;2.38e-15;1!DOID:3978;2.38e-15;1!DOID:3394;2.38e-15;1!DOID:5844;2.38e-15;1!DOID:1287;2.75e-15;4!DOID:5409;5.63e-15;4!DOID:0050615;2.19e-14;16!DOID:1324;5.15e-09;15!DOID:1325;5.82e-09;7!DOID:3904;5.82e-09;7!DOID:3905;3.67e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.08e-29,2;DOID:0050619,8.63e-16,1;DOID:1357,8.63e-16,1;DOID:178,1.54e-15,1;DOID:326,1.54e-15,1;DOID:3978,1.54e-15,1;DOID:3394,1.54e-15,1;DOID:5844,1.54e-15,1;DOID:1287,2.22e-15,4;DOID:5409,6.49e-15,4;DOID:0050615,2.47e-14,16;DOID:1324,5.92e-09,15;DOID:1325,6.31e-09,7;DOID:3904,6.31e-09,7;DOID:3905,3.90e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.43e-08!94;UBERON:0001016!5.43e-08!94;UBERON:0005743!9.55e-08!86;UBERON:0001017!1.13e-07!82;UBERON:0000955!1.28e-07!69;UBERON:0006238!1.28e-07!69;UBERON:0007023!7.84e-07!115 | |ontology_enrichment_uberon=UBERON:0000073!5.43e-08!94;UBERON:0001016!5.43e-08!94;UBERON:0005743!9.55e-08!86;UBERON:0001017!1.13e-07!82;UBERON:0000955!1.28e-07!69;UBERON:0006238!1.28e-07!69;UBERON:0007023!7.84e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002146;6.93e-16;1!UBERON:0005623;6.93e-16;1!UBERON:0001764;1.07e-15;1!UBERON:0001825;1.07e-15;1!UBERON:0007100;1.62e-09;25!UBERON:0001905;2.48e-08;2!UBERON:0002757;2.48e-08;2!UBERON:0010134;2.48e-08;2!UBERON:0005408;2.48e-08;2!UBERON:0001899;2.48e-08;2!UBERON:0004802;3.15e-07;19!UBERON:0000115;3.15e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,7.46e-16,1;UBERON:0005623,7.46e-16,1;UBERON:0001764,8.63e-16,1;UBERON:0001825,8.63e-16,1;UBERON:0007100,7.43e-09,27;UBERON:0001905,2.67e-08,2;UBERON:0002757,2.67e-08,2;UBERON:0010134,2.67e-08,2;UBERON:0005408,2.67e-08,2;UBERON:0001899,2.67e-08,2;UBERON:0004802,3.51e-07,19;UBERON:0000115,3.51e-07,19 | |||
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| ||
|short_description=p@chr10:112523532..112523536,+ | |short_description=p@chr10:112523532..112523536,+ | ||
}} | }} |
Latest revision as of 10:25, 23 July 2015
Short description: | p@chr10:112523532..112523536, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:112523532..112523536, + |
Coexpression cluster: | C1104_heart_maxillary_teratocarcinoma_left_neuroblastoma_small_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 3.51e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 7.46e-16 | 1 |
semi-lunar valve | 7.46e-16 | 1 |
maxillary sinus | 8.63e-16 | 1 |
paranasal sinus | 8.63e-16 | 1 |
primary circulatory organ | 7.43e-09 | 27 |
pineal body | 2.67e-08 | 2 |
regional part of epithalamus | 2.67e-08 | 2 |
secretory circumventricular organ | 2.67e-08 | 2 |
circumventricular organ | 2.67e-08 | 2 |
epithalamus | 2.67e-08 | 2 |
respiratory tract epithelium | 3.51e-07 | 19 |
lung epithelium | 3.51e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.08e-29 | 2 |
paranasal sinus cancer | 8.63e-16 | 1 |
maxillary sinus cancer | 8.63e-16 | 1 |
vascular disease | 1.54e-15 | 1 |
ischemia | 1.54e-15 | 1 |
extrinsic cardiomyopathy | 1.54e-15 | 1 |
myocardial ischemia | 1.54e-15 | 1 |
myocardial infarction | 1.54e-15 | 1 |
cardiovascular system disease | 2.22e-15 | 4 |
lung small cell carcinoma | 6.49e-15 | 4 |
respiratory system cancer | 2.47e-14 | 16 |
lung cancer | 5.92e-09 | 15 |
bronchus cancer | 6.31e-09 | 7 |
bronchogenic carcinoma | 6.31e-09 | 7 |
lung carcinoma | 3.90e-07 | 9 |