FFCP PHASE1:Hg19::chr10:106205503..106205518,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:106205503..106205518,+ | |||
|coexpression_cluster_id=C406 | |coexpression_cluster_id=C406 | ||
|description=CAGE_peak_at_chr10:106205503..106205518,+ | |description=CAGE_peak_at_chr10:106205503..106205518,+ | ||
|id=chr10:106205503..106205518,+ | |id=chr10:106205503..106205518,+ | ||
|ontology_enrichment_celltype=CL:0002166!9.65e-19!3;CL:0002621!1.63e-18!3;CL:0002159!1.14e-15!13;CL:0000220!7.05e-09!246;CL:0002321!9.13e-09!248;CL:0002077!9.75e-08!33;CL:0000362!6.57e-07!8;CL:0000066!7.39e-07!254 | |ontology_enrichment_celltype=CL:0002166!9.65e-19!3;CL:0002621!1.63e-18!3;CL:0002159!1.14e-15!13;CL:0000220!7.05e-09!246;CL:0002321!9.13e-09!248;CL:0002077!9.75e-08!33;CL:0000362!6.57e-07!8;CL:0000066!7.39e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002166;2.33e-118;3!CL:0002621;6.39e-53;3!CL:0002159;2.90e-26;14!CL:0002077;1.59e-09;34!CL:0002251;6.69e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,2.33e-118,3;CL:0002621,6.39e-53,3;CL:0002159,2.90e-26,14;CL:0002077,2.39e-11,34;CL:0002251,6.69e-09,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.63e-18!3;UBERON:0001708!3.47e-14!4;UBERON:0001704!3.47e-14!4;UBERON:0002090!1.31e-09!6;UBERON:0001828!3.19e-07!8 | |ontology_enrichment_uberon=UBERON:0001949!1.63e-18!3;UBERON:0001708!3.47e-14!4;UBERON:0001704!3.47e-14!4;UBERON:0002090!1.31e-09!6;UBERON:0001828!3.19e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;4.23e-89;4!UBERON:0008895;4.23e-89;4!UBERON:0011159;1.56e-71;5!UBERON:0001949;6.39e-53;3!UBERON:0011137;3.85e-33;11!UBERON:0010323;3.85e-33;11!UBERON:0003929;2.02e-23;7!UBERON:0000075;4.17e-23;16!UBERON:0003350;1.21e-20;8!UBERON:0001828;1.21e-20;8!UBERON:0004765;1.41e-14;26!UBERON:0000486;3.84e-14;12!UBERON:0003729;3.87e-13;13!UBERON:0001434;8.11e-11;36!UBERON:0000161;2.56e-09;19!UBERON:0000166;2.56e-09;19!UBERON:0000344;6.69e-09;20!UBERON:0004807;3.51e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,4.23e-89,4;UBERON:0008895,4.23e-89,4;UBERON:0011159,1.56e-71,5;UBERON:0010188,8.15e-60,6;UBERON:0002539,8.15e-60,6;UBERON:0008816,8.15e-60,6;UBERON:0001949,6.39e-53,3;UBERON:0010323,3.85e-33,11;UBERON:0011137,2.90e-26,14;UBERON:0000075,4.17e-23,16;UBERON:0008814,1.20e-20,18;UBERON:0003350,1.21e-20,8;UBERON:0001828,1.21e-20,8;UBERON:0000033,2.77e-18,56;UBERON:0000153,1.38e-16,62;UBERON:0007811,1.38e-16,62;UBERON:0003729,3.87e-13,13;UBERON:0003102,1.23e-10,99;UBERON:0000344,6.69e-09,20;UBERON:0000166,3.51e-08,22 | |||
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|short_description=p@chr10:106205503..106205518,+ | |short_description=p@chr10:106205503..106205518,+ | ||
}} | }} |
Latest revision as of 10:10, 23 July 2015
Short description: | p@chr10:106205503..106205518, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:106205503..106205518, + |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 2.33e-118 | 3 |
gingival epithelial cell | 6.39e-53 | 3 |
general ecto-epithelial cell | 2.90e-26 | 14 |
ecto-epithelial cell | 2.39e-11 | 34 |
epithelial cell of alimentary canal | 6.69e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 4.23e-89 | 4 |
splanchnocranium | 4.23e-89 | 4 |
primary subdivision of cranial skeletal system | 1.56e-71 | 5 |
protuberance | 8.15e-60 | 6 |
pharyngeal arch | 8.15e-60 | 6 |
embryonic head | 8.15e-60 | 6 |
gingival epithelium | 6.39e-53 | 3 |
cranial skeletal system | 3.85e-33 | 11 |
axial skeletal system | 2.90e-26 | 14 |
subdivision of skeletal system | 4.17e-23 | 16 |
pharyngeal arch system | 1.20e-20 | 18 |
epithelium of mucosa | 1.21e-20 | 8 |
gingiva | 1.21e-20 | 8 |
head | 2.77e-18 | 56 |
anterior region of body | 1.38e-16 | 62 |
craniocervical region | 1.38e-16 | 62 |
mouth mucosa | 3.87e-13 | 13 |
surface structure | 1.23e-10 | 99 |
mucosa | 6.69e-09 | 20 |
oral opening | 3.51e-08 | 22 |