FFCP PHASE1:Hg19::chr17:75449857..75449875,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:75449857..75449875,+
|short_description=p40@SEPT9
|description=CAGE_peak_40_at_SEPT9_5end
|association_with_transcript=-199bp_to_uc010wtn.1_5end
|EntrezG...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10801 | |EntrezGene=10801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |HGNC=7323 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-199bp_to_uc010wtn.1_5end | |||
|cluster_id=chr17:75449857..75449875,+ | |||
|description=CAGE_peak_40_at_SEPT9_5end | |||
|id=chr17:75449857..75449875,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.48e-42!140;CL:0002087!4.67e-41!119;CL:0002057!2.35e-37!42;CL:0000037!2.33e-35!172;CL:0000566!2.33e-35!172;CL:0002032!2.81e-35!165;CL:0000837!2.81e-35!165;CL:0000766!2.63e-34!76;CL:0000988!3.01e-34!182;CL:0002031!3.36e-34!124;CL:0002194!3.55e-34!63;CL:0000576!3.55e-34!63;CL:0000040!3.55e-34!63;CL:0000559!3.55e-34!63;CL:0000860!5.30e-34!45;CL:0002009!1.14e-32!65;CL:0000839!2.72e-29!70;CL:0000557!1.13e-28!71;CL:0000763!2.12e-26!112;CL:0000049!2.12e-26!112;CL:0002393!3.76e-13!9;CL:0002397!3.76e-13!9;CL:0002320!1.66e-08!365;CL:0000542!2.65e-08!53;CL:0000051!2.65e-08!53;CL:0000134!3.22e-08!358;CL:0000838!9.98e-08!52;CL:0000219!1.12e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.39e-15;6!CL:0002397;1.39e-15;6!CL:0000766;9.72e-14;69!CL:0000182;1.32e-12;12!CL:0000576;7.35e-12;48!CL:0000473;1.31e-09;39!CL:0000234;1.31e-09;39!CL:0000775;5.18e-09;3!CL:0000860;8.68e-09;33!CL:0002057;8.68e-09;33!CL:0000094;2.42e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.01e-20,48;CL:0000234,1.01e-20,48;CL:0000860,1.45e-20,42;CL:0002057,1.45e-20,42;CL:0000766,1.85e-19,72;CL:0002194,5.14e-16,59;CL:0000576,5.14e-16,59;CL:0000040,5.14e-16,59;CL:0000559,5.14e-16,59;CL:0002393,8.22e-16,9;CL:0002397,8.22e-16,9;CL:0002009,2.08e-15,61;CL:0000839,4.74e-14,66;CL:0000557,8.39e-14,67;CL:0000182,1.01e-12,12;CL:0000763,7.18e-12,108;CL:0000049,7.18e-12,108;CL:0000738,1.92e-11,136;CL:0002087,1.52e-09,115;CL:0002032,4.47e-09,161;CL:0000837,4.47e-09,161;CL:0000775,4.99e-09,3;CL:0002031,5.12e-09,120;CL:0000037,1.53e-08,168;CL:0000988,6.47e-08,177;CL:0000094,2.29e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.28e-15;42!UBERON:0004161;3.49e-09;11!UBERON:0009497;8.86e-08;13!UBERON:0005754;2.03e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;1.05e-07;1!DOID:0070004;1.05e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.06e-07,1;DOID:0070004,1.06e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.04e-31!102;UBERON:0003061!3.04e-31!102;UBERON:0002193!6.97e-28!112;UBERON:0002405!1.06e-27!115;UBERON:0002371!2.00e-25!80;UBERON:0001474!1.24e-22!86;UBERON:0004765!3.58e-17!101;UBERON:0001434!3.58e-17!101;UBERON:0002384!1.03e-07!375;UBERON:0002204!1.67e-07!167;UBERON:0003081!2.59e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.58e-11;19!UBERON:0006925;4.58e-11;19!UBERON:0002423;2.87e-08;25!UBERON:0000998;2.03e-07;1!UBERON:0006868;2.03e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.05e-14,76;UBERON:0002390,1.92e-13,98;UBERON:0003061,1.92e-13,98;UBERON:0001474,1.18e-12,82;UBERON:0002405,1.54e-12,93;UBERON:0002193,6.89e-12,108;UBERON:0004765,2.81e-11,90;UBERON:0002107,3.73e-11,19;UBERON:0006925,3.73e-11,19;UBERON:0008836,3.73e-11,19;UBERON:0001434,7.27e-10,100;UBERON:0008835,1.49e-09,22;UBERON:0003894,1.49e-09,22;UBERON:0009854,4.12e-09,23;UBERON:0007499,2.47e-08,25;UBERON:0009497,2.47e-08,25;UBERON:0000015,2.47e-08,25;UBERON:0002423,2.47e-08,25;UBERON:0006235,2.47e-08,25;UBERON:0004161,2.47e-08,25;UBERON:0009856,5.45e-08,26;UBERON:0000998,2.37e-07,1;UBERON:0006868,2.37e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.534893840235659,0.57470412614962,0.629686250509434,2.75354993794233,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0.553995408531877,1.20326668482085,1.08505435357926,0.671746422719773,0.32389366601898,0.257575567634187,0.872389432677388,0.755751887377619,0.727752183563449,0.232429036905685,0.411167888021826,0.619412741790207,0.575384784644301,0.512321413058201,0,1.37898272294647,1.93645405075148,0,1.12945403725563,0.545812300115692,0.224723484445085,0.612167784741805,0.641858054152187,0,0.659702600373432,0.398927315243264,0.852449501065388,0.580418477257168,0,0,1.25624332628372,1.0429658368404,0.65156653411535,0.605399502633369,0.736555271975129,0,1.05627643155971,1.91343869968539,0.628975936525128,2.13424399178341,1.65194582125657,1.6072558669708,0.570025487482497,0.99458338599545,1.82664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0,0,0.334372990781356,0,0,0,0.557052284425868,0.883817722424512,0,0,0.512365278902701,0.650296737799391,0,0,0,0,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.571481048629521,1.52795370223311,0,0,0.308482478109971,0,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0.784596007954691,0.394061520403854,0,0.128343036279748,0,0,0,0,0,1.49801404789436,5.9832291840805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0.862856803274467,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,1.58625035258854,0,0,0,0.371606350251437,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,2.78608460693696,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0.102268682502155,0.861593638227486,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.973033209536731,0,0,0,0,0,0,0,0.547364367646998,0,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0.223171457441873,0,0,0,3.93915911536118,3.79112948553366,4.31382680666783,0,0.931406652723629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4913879725274,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.817826971279221,0,0,0,0.59996218756479,0,6.88859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0.175871244359621,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,2.11693525095465,0,0,0,0,0.196300467230486,8.16850097381205,0,0,0,0.485710993059139,0,0,0,0,0,0,4.16740453782901,0,0,0,0,0,0,0,0,0.187967835959707,0.322289439867886,3.59788161329744,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0.213233981900981,0,0,0.186224142887574,0,0,0,0,0.342233301085281,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.534893840235659,0.57470412614962,0.629686250509434,2.75354993794233,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0.553995408531877,1.20326668482085,1.08505435357926,0.671746422719773,0.32389366601898,0.257575567634187,0.872389432677388,0.755751887377619,0.727752183563449,0.232429036905685,0.411167888021826,0.619412741790207,0.575384784644301,0.512321413058201,0,1.37898272294647,1.93645405075148,0,1.12945403725563,0.545812300115692,0.224723484445085,0.612167784741805,0.641858054152187,0,0.659702600373432,0.398927315243264,0.852449501065388,0.580418477257168,0,0,1.25624332628372,1.0429658368404,0.65156653411535,0.605399502633369,0.736555271975129,0,1.05627643155971,1.91343869968539,0.628975936525128,2.13424399178341,1.65194582125657,1.6072558669708,0.570025487482497,0.99458338599545,1.82664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0,0,0.334372990781356,0,0,0,0.557052284425868,0.883817722424512,0,0,0.512365278902701,0.650296737799391,0,0,0,0,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.571481048629521,1.52795370223311,0,0,0.308482478109971,0,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0.784596007954691,0.394061520403854,0,0.128343036279748,0,0,0,0,0,1.49801404789436,5.9832291840805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0.862856803274467,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,1.58625035258854,0,0,0,0.371606350251437,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,2.78608460693696,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0.102268682502155,0.861593638227486,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.973033209536731,0,0,0,0,0,0,0,0.547364367646998,0,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0.223171457441873,0,0,0,3.93915911536118,3.79112948553366,4.31382680666783,0,0.931406652723629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4913879725274,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.817826971279221,0,0,0,0.59996218756479,0,6.88859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0.175871244359621,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,2.11693525095465,0,0,0,0,0.196300467230486,8.16850097381205,0,0,0,0.485710993059139,0,0,0,0,0,0,4.16740453782901,0,0,0,0,0,0,0,0,0.187967835959707,0.322289439867886,3.59788161329744,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0.213233981900981,0,0,0.186224142887574,0,0,0,0,0.342233301085281,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p40@SEPT9 | |||
}} | }} |
Latest revision as of 18:49, 17 September 2015
Short description: | p40@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_SEPT9_5end |
Coexpression cluster: | NA |
Association with transcript: | -199bp_to_uc010wtn.1_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.01e-20 | 48 |
phagocyte | 1.01e-20 | 48 |
classical monocyte | 1.45e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.45e-20 | 42 |
myeloid leukocyte | 1.85e-19 | 72 |
monopoietic cell | 5.14e-16 | 59 |
monocyte | 5.14e-16 | 59 |
monoblast | 5.14e-16 | 59 |
promonocyte | 5.14e-16 | 59 |
intermediate monocyte | 8.22e-16 | 9 |
CD14-positive, CD16-positive monocyte | 8.22e-16 | 9 |
macrophage dendritic cell progenitor | 2.08e-15 | 61 |
myeloid lineage restricted progenitor cell | 4.74e-14 | 66 |
granulocyte monocyte progenitor cell | 8.39e-14 | 67 |
hepatocyte | 1.01e-12 | 12 |
myeloid cell | 7.18e-12 | 108 |
common myeloid progenitor | 7.18e-12 | 108 |
leukocyte | 1.92e-11 | 136 |
nongranular leukocyte | 1.52e-09 | 115 |
hematopoietic oligopotent progenitor cell | 4.47e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.47e-09 | 161 |
neutrophil | 4.99e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 5.12e-09 | 120 |
hematopoietic stem cell | 1.53e-08 | 168 |
hematopoietic cell | 6.47e-08 | 177 |
granulocyte | 2.29e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.05e-14 | 76 |
hematopoietic system | 1.92e-13 | 98 |
blood island | 1.92e-13 | 98 |
bone element | 1.18e-12 | 82 |
immune system | 1.54e-12 | 93 |
hemolymphoid system | 6.89e-12 | 108 |
skeletal element | 2.81e-11 | 90 |
liver | 3.73e-11 | 19 |
digestive gland | 3.73e-11 | 19 |
liver bud | 3.73e-11 | 19 |
skeletal system | 7.27e-10 | 100 |
hepatic diverticulum | 1.49e-09 | 22 |
liver primordium | 1.49e-09 | 22 |
digestive tract diverticulum | 4.12e-09 | 23 |
epithelial sac | 2.47e-08 | 25 |
epithelium of foregut-midgut junction | 2.47e-08 | 25 |
anatomical boundary | 2.47e-08 | 25 |
hepatobiliary system | 2.47e-08 | 25 |
foregut-midgut junction | 2.47e-08 | 25 |
septum transversum | 2.47e-08 | 25 |
sac | 5.45e-08 | 26 |
seminal vesicle | 2.37e-07 | 1 |
seminal fluid secreting gland | 2.37e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.06e-07 | 1 |
myeloma | 1.06e-07 | 1 |