FFCP PHASE1:Hg19::chr17:7483714..7483726,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:7483714..7483726,+
|short_description=p@chr17:7483714..7483726,+
|description=CAGE_peak_at_chr17:7483714..7483726,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:7483714..7483726,+ | |||
|coexpression_cluster_id=C314 | |||
|description=CAGE_peak_at_chr17:7483714..7483726,+ | |||
|id=chr17:7483714..7483726,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.60e-69!63;CL:0000576!1.60e-69!63;CL:0000040!1.60e-69!63;CL:0000559!1.60e-69!63;CL:0002009!1.86e-69!65;CL:0000557!4.30e-62!71;CL:0000766!7.37e-62!76;CL:0000839!7.85e-61!70;CL:0002057!2.84e-60!42;CL:0000860!2.67e-55!45;CL:0000763!4.39e-39!112;CL:0000049!4.39e-39!112;CL:0002087!9.84e-33!119;CL:0000738!4.11e-30!140;CL:0002031!4.56e-28!124;CL:0000037!5.16e-22!172;CL:0000566!5.16e-22!172;CL:0002032!9.93e-21!165;CL:0000837!9.93e-21!165;CL:0000988!8.28e-20!182;CL:0002393!2.07e-11!9;CL:0002397!2.07e-11!9;CL:0000235!7.58e-07!10;CL:0002619!8.37e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.18e-87;39!CL:0000234;5.18e-87;39!CL:0000860;1.29e-82;33!CL:0002057;1.29e-82;33!CL:0000576;1.30e-64;48!CL:0000766;3.24e-46;69!CL:0000235;8.57e-24;6!CL:0000763;8.38e-23;100!CL:0000738;2.51e-15;136!CL:0002087;1.55e-14;104!CL:0002619;1.62e-12;3!CL:0002393;2.52e-09;6!CL:0002397;2.52e-09;6!CL:0000988;2.34e-07;177!CL:0000219;4.70e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.49e-127,59;CL:0000576,2.49e-127,59;CL:0000040,2.49e-127,59;CL:0000559,2.49e-127,59;CL:0002009,6.87e-123,61;CL:0000473,8.63e-120,48;CL:0000234,8.63e-120,48;CL:0000839,6.02e-113,66;CL:0000766,5.36e-112,72;CL:0000557,3.91e-111,67;CL:0000860,2.52e-97,42;CL:0002057,2.52e-97,42;CL:0000763,1.58e-71,108;CL:0000049,1.58e-71,108;CL:0002087,7.72e-61,115;CL:0002031,6.82e-58,120;CL:0000738,9.70e-55,136;CL:0002032,1.20e-44,161;CL:0000837,1.20e-44,161;CL:0000037,2.35e-42,168;CL:0000988,1.13e-39,177;CL:0000235,8.59e-24,6;CL:0000134,1.99e-15,354;CL:0002320,6.44e-15,361;CL:0000219,4.03e-13,386;CL:0002619,1.62e-12,3;CL:0000048,1.09e-11,427;CL:0000723,2.25e-11,433;CL:0000034,5.74e-11,441;CL:0002393,1.95e-09,9;CL:0002397,1.95e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;9.55e-68;42!CL:0000049;3.30e-22;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.10e-53!80;UBERON:0002390!7.44e-52!102;UBERON:0003061!7.44e-52!102;UBERON:0002193!6.73e-49!112;UBERON:0001474!3.58e-48!86;UBERON:0002405!1.13e-43!115;UBERON:0004765!5.42e-40!101;UBERON:0001434!5.42e-40!101;UBERON:0003081!5.52e-21!216;UBERON:0002204!3.69e-19!167;UBERON:0000926!2.12e-09!448;UBERON:0004120!2.12e-09!448;UBERON:0006603!2.12e-09!448;UBERON:0000062!3.03e-09!511;UBERON:0000467!2.39e-07!625;UBERON:0000480!2.72e-07!626;UBERON:0007023!8.52e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.22e-97,76;UBERON:0001474,3.56e-89,82;UBERON:0002405,1.01e-84,93;UBERON:0004765,2.02e-80,90;UBERON:0002390,2.10e-76,98;UBERON:0003061,2.10e-76,98;UBERON:0002193,1.31e-71,108;UBERON:0001434,2.00e-71,100;UBERON:0002204,9.29e-39,167;UBERON:0003081,1.25e-31,203;UBERON:0000926,1.24e-16,315;UBERON:0004120,1.24e-16,315;UBERON:0006603,1.24e-16,315;UBERON:0002384,4.14e-15,371 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,1.85779347979291,0,0,0,0,0,0,0,1.80490002723128,0.868043482863407,8.50878802111712,8.09734165047449,7.98484259665978,3.34415949192999,4.53451132426571,3.15359279544161,4.18372266430232,5.34518254428373,5.26500830521676,1.43846196161075,2.81776777182011,1.6553756092201,2.75796544589295,4.51839278508678,5.41705946377367,3.01187743268168,6.82265375144614,4.04502272001152,4.28517449319264,1.92557416245656,3.83602275479425,2.30895910130701,2.19410023383795,1.70489900213078,2.32167390902867,3.97169657283798,2.4912889959823,2.76373531782418,3.12889751052121,3.47502151528187,0,4.05105399586321,2.84816148696796,1.90129757680748,2.12604299965044,1.25795187305026,0.336985893439485,1.05123824989054,0.32145117339416,0.570025487482497,2.58591680358817,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,13.6309905334967,10.9701734498538,13.4287540124054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8184162921951,25.7404691653161,13.5254357682743,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.162378064119,9.04062764577828,8.43335757932127,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671028323677248,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0,0.13223260174269,0,0,1.06787412567695,0.157204305099666,1.65695622138878,2.48083010905975,0,0,0,0,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.266107110487916,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.0714765441766563,0,0.581207126840626,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31577485171795,0.386747327841463,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.193766729508018,0.124149428591716,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr17:7483714..7483726,+ | |||
}} | }} |
Latest revision as of 21:36, 25 July 2015
Short description: | p@chr17:7483714..7483726, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7483714..7483726, + |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.22e-97 | 76 |
bone element | 3.56e-89 | 82 |
immune system | 1.01e-84 | 93 |
skeletal element | 2.02e-80 | 90 |
hematopoietic system | 2.10e-76 | 98 |
blood island | 2.10e-76 | 98 |
hemolymphoid system | 1.31e-71 | 108 |
skeletal system | 2.00e-71 | 100 |
musculoskeletal system | 9.29e-39 | 167 |
lateral plate mesoderm | 1.25e-31 | 203 |
mesoderm | 1.24e-16 | 315 |
mesoderm-derived structure | 1.24e-16 | 315 |
presumptive mesoderm | 1.24e-16 | 315 |
connective tissue | 4.14e-15 | 371 |