FFCP PHASE1:Hg19::chr17:74722015..74722058,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:74722015..74722058,-
|short_description=p7@JMJD6
|description=CAGE_peak_7_at_JMJD6_5end
|association_with_transcript=-91bp_to_BC016837_5end
|EntrezGene=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23210 | |EntrezGene=23210 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19355 | |HGNC=19355 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-91bp_to_BC016837_5end | |||
|cluster_id=chr17:74722015..74722058,- | |||
|description=CAGE_peak_7_at_JMJD6_5end | |||
|id=chr17:74722015..74722058,- | |||
|ontology_enrichment_celltype=CL:0002057!6.29e-19!42;CL:0000738!1.80e-17!140;CL:0000860!3.78e-17!45;CL:0000037!1.16e-16!172;CL:0000566!1.16e-16!172;CL:0002032!1.54e-16!165;CL:0000837!1.54e-16!165;CL:0000988!5.44e-15!182;CL:0000766!9.48e-15!76;CL:0002031!8.53e-14!124;CL:0000763!1.06e-13!112;CL:0000049!1.06e-13!112;CL:0002087!2.73e-13!119;CL:0000839!3.22e-11!70;CL:0000557!6.38e-11!71;CL:0002009!1.23e-10!65;CL:0002194!1.24e-10!63;CL:0000576!1.24e-10!63;CL:0000040!1.24e-10!63;CL:0000559!1.24e-10!63;CL:0000134!2.33e-08!358;CL:0000048!3.51e-08!430;CL:0000723!9.50e-08!436;CL:0000034!1.16e-07!444;CL:0002320!1.47e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.74e-17;33!CL:0002057;1.74e-17;33!CL:0000094;1.88e-13;8!CL:0000576;6.02e-12;48!CL:0000473;1.68e-11;39!CL:0000234;1.68e-11;39!CL:0000767;1.20e-09;3!CL:0000081;1.50e-09;11!CL:0000623;2.09e-09;3!CL:0000766;4.07e-08;69!CL:0002087;5.41e-08;104!CL:0000771;1.77e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.20e-22,136;CL:0000860,5.09e-21,42;CL:0002057,5.09e-21,42;CL:0000766,3.18e-19,72;CL:0000473,9.93e-18,48;CL:0000234,9.93e-18,48;CL:0000037,1.48e-17,168;CL:0002087,2.35e-17,115;CL:0000988,3.91e-16,177;CL:0002032,2.81e-15,161;CL:0000837,2.81e-15,161;CL:0002031,7.93e-14,120;CL:0000094,1.26e-13,8;CL:0002194,3.75e-13,59;CL:0000576,3.75e-13,59;CL:0000040,3.75e-13,59;CL:0000559,3.75e-13,59;CL:0002009,1.45e-12,61;CL:0000763,9.22e-12,108;CL:0000049,9.22e-12,108;CL:0000839,2.95e-11,66;CL:0000557,5.09e-11,67;CL:0000767,6.91e-10,3;CL:0000081,1.14e-09,11;CL:0000623,1.74e-09,3;CL:0000825,1.74e-09,3;CL:0000134,1.54e-07,354;CL:0000771,1.79e-07,2;CL:0002320,3.55e-07,361;CL:0000048,3.58e-07,427;CL:0000723,6.69e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.85e-12!86;UBERON:0004765!1.11e-10!101;UBERON:0001434!1.11e-10!101;UBERON:0002371!1.58e-10!80;UBERON:0002390!1.69e-09!102;UBERON:0003061!1.69e-09!102;UBERON:0002193!2.24e-08!112;UBERON:0002204!2.49e-08!167;UBERON:0002384!5.19e-08!375;UBERON:0002405!2.20e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.79e-10,98;UBERON:0003061,8.79e-10,98;UBERON:0002371,3.62e-09,76;UBERON:0002193,2.31e-08,108;UBERON:0001474,3.62e-08,82;UBERON:0002384,8.93e-08,371;UBERON:0002405,1.63e-07,93;UBERON:0004765,4.73e-07,90 | |||
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| ||
|short_description=p7@JMJD6 | |||
}} | }} |
Latest revision as of 16:40, 17 September 2015
Short description: | p7@JMJD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_JMJD6_5end |
Coexpression cluster: | NA |
Association with transcript: | -91bp_to_BC016837_5end |
EntrezGene: | JMJD6 |
HGNC: | 19355 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.20e-22 | 136 |
classical monocyte | 5.09e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.09e-21 | 42 |
myeloid leukocyte | 3.18e-19 | 72 |
defensive cell | 9.93e-18 | 48 |
phagocyte | 9.93e-18 | 48 |
hematopoietic stem cell | 1.48e-17 | 168 |
nongranular leukocyte | 2.35e-17 | 115 |
hematopoietic cell | 3.91e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.81e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.81e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 7.93e-14 | 120 |
granulocyte | 1.26e-13 | 8 |
monopoietic cell | 3.75e-13 | 59 |
monocyte | 3.75e-13 | 59 |
monoblast | 3.75e-13 | 59 |
promonocyte | 3.75e-13 | 59 |
macrophage dendritic cell progenitor | 1.45e-12 | 61 |
myeloid cell | 9.22e-12 | 108 |
common myeloid progenitor | 9.22e-12 | 108 |
myeloid lineage restricted progenitor cell | 2.95e-11 | 66 |
granulocyte monocyte progenitor cell | 5.09e-11 | 67 |
basophil | 6.91e-10 | 3 |
blood cell | 1.14e-09 | 11 |
natural killer cell | 1.74e-09 | 3 |
pro-NK cell | 1.74e-09 | 3 |
mesenchymal cell | 1.54e-07 | 354 |
eosinophil | 1.79e-07 | 2 |
connective tissue cell | 3.55e-07 | 361 |
multi fate stem cell | 3.58e-07 | 427 |
somatic stem cell | 6.69e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.79e-10 | 98 |
blood island | 8.79e-10 | 98 |
bone marrow | 3.62e-09 | 76 |
hemolymphoid system | 2.31e-08 | 108 |
bone element | 3.62e-08 | 82 |
connective tissue | 8.93e-08 | 371 |
immune system | 1.63e-07 | 93 |
skeletal element | 4.73e-07 | 90 |