FFCP PHASE1:Hg19::chr17:74272276..74272287,-: Difference between revisions
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|id=chr17:74272276..74272287,-
|short_description=p@chr17:74272276..74272287,-
|description=CAGE_peak_at_chr17:74272276..74272287,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:74272276..74272287,- | |||
|coexpression_cluster_id=C3680 | |||
|description=CAGE_peak_at_chr17:74272276..74272287,- | |||
|id=chr17:74272276..74272287,- | |||
|ontology_enrichment_celltype=CL:0000945!1.75e-24!24;CL:0000826!1.75e-24!24;CL:0000542!5.77e-24!53;CL:0000051!5.77e-24!53;CL:0000838!1.95e-20!52;CL:0000080!2.35e-15!6;CL:0002087!2.46e-11!119;CL:0000236!4.51e-11!14;CL:0000988!7.39e-11!182;CL:0000946!9.97e-11!1;CL:0000786!9.97e-11!1;CL:0000980!9.97e-11!1;CL:0002127!1.61e-10!1;CL:0000914!1.61e-10!1;CL:0000911!1.61e-10!1;CL:0000814!1.61e-10!1;CL:0002042!1.61e-10!1;CL:0002039!1.61e-10!1;CL:0002040!1.61e-10!1;CL:0002041!1.61e-10!1;CL:0000738!2.47e-09!140;CL:0002031!4.57e-09!124;CL:0002032!1.31e-07!165;CL:0000837!1.31e-07!165;CL:0000037!3.25e-07!172;CL:0000566!3.25e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.01e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.42e-12,53;CL:0000051,6.42e-12,53;CL:0000945,6.10e-10,24;CL:0000826,6.10e-10,24;CL:0000988,6.97e-09,177;CL:0000838,4.63e-08,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4960!3.41e-11!1;DOID:0070004!3.41e-11!1;DOID:12603!4.58e-11!1;DOID:630!5.05e-11!1;DOID:0050177!5.05e-11!1;DOID:0050427!5.05e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:4960;4.06e-26;1!DOID:0070004;4.06e-26;1!DOID:12603;8.64e-26;1!DOID:630;1.26e-25;1!DOID:0050177;1.26e-25;1!DOID:0050427;1.26e-25;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.61e-26,1;DOID:0070004,4.61e-26,1;DOID:12603,9.79e-26,1;DOID:630,1.26e-25,1;DOID:0050177,1.26e-25,1;DOID:0050427,1.26e-25,1;DOID:2531,3.21e-08,51;DOID:0060083,3.21e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002372!1.21e-10!1;UBERON:0001961!1.21e-10!1;UBERON:0001744!1.21e-10!1;UBERON:0001735!1.21e-10!1;UBERON:0002331!1.99e-09!10;UBERON:0000358!1.99e-09!10;UBERON:0000307!1.99e-09!10;UBERON:0000091!1.99e-09!10;UBERON:0000087!1.99e-09!10;UBERON:0007806!1.99e-09!10;UBERON:0008780!1.99e-09!10;UBERON:0005728!1.99e-09!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;5.53e-23;10!UBERON:0000178;1.37e-15;15!UBERON:0000179;1.37e-15;15!UBERON:0000463;1.37e-15;15!UBERON:0002390;1.37e-12;32!UBERON:0000478;5.23e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.13e-23,10;UBERON:0000358,5.13e-23,10;UBERON:0000307,5.13e-23,10;UBERON:0000091,5.13e-23,10;UBERON:0000087,5.13e-23,10;UBERON:0007010,5.13e-23,10;UBERON:0007806,5.13e-23,10;UBERON:0008780,5.13e-23,10;UBERON:0005728,5.13e-23,10;UBERON:0000178,1.31e-15,15;UBERON:0000179,1.31e-15,15;UBERON:0000463,1.31e-15,15;UBERON:0000478,5.07e-10,24 | |||
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|short_description=p@chr17:74272276..74272287,- | |||
}} | }} |
Latest revision as of 21:23, 25 July 2015
Short description: | p@chr17:74272276..74272287, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:74272276..74272287, - |
Coexpression cluster: | C3680_hairy_cord_myeloma_lymphoma_acute_anaplastic_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.42e-12 | 53 |
common lymphoid progenitor | 6.42e-12 | 53 |
lymphocyte of B lineage | 6.10e-10 | 24 |
pro-B cell | 6.10e-10 | 24 |
hematopoietic cell | 6.97e-09 | 177 |
lymphoid lineage restricted progenitor cell | 4.63e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.13e-23 | 10 |
blastocyst | 5.13e-23 | 10 |
blastula | 5.13e-23 | 10 |
bilaminar disc | 5.13e-23 | 10 |
inner cell mass | 5.13e-23 | 10 |
cleaving embryo | 5.13e-23 | 10 |
connecting stalk | 5.13e-23 | 10 |
inner cell mass derived epiblast | 5.13e-23 | 10 |
extraembryonic mesoderm | 5.13e-23 | 10 |
blood | 1.31e-15 | 15 |
haemolymphatic fluid | 1.31e-15 | 15 |
organism substance | 1.31e-15 | 15 |
extraembryonic structure | 5.07e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.61e-26 | 1 |
myeloma | 4.61e-26 | 1 |
acute leukemia | 9.79e-26 | 1 |
genetic disease | 1.26e-25 | 1 |
monogenic disease | 1.26e-25 | 1 |
xeroderma pigmentosum | 1.26e-25 | 1 |
hematologic cancer | 3.21e-08 | 51 |
immune system cancer | 3.21e-08 | 51 |