FFCP PHASE1:Hg19::chr17:73401714..73401725,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:73401714..73401725,-
|short_description=p3@GRB2
|description=CAGE_peak_3_at_GRB2_5end
|association_with_transcript=8bp_to_ENST00000316804_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2885 | |EntrezGene=2885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4566 | |HGNC=4566 | ||
|TSSclassifier=strong | |||
|UniProt=P62993 | |UniProt=P62993 | ||
|association_with_transcript=8bp_to_ENST00000316804_5end | |||
|cluster_id=chr17:73401714..73401725,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_GRB2_5end | |||
|id=chr17:73401714..73401725,- | |||
|ontology_enrichment_celltype=CL:0000037!6.84e-68!172;CL:0000566!6.84e-68!172;CL:0002032!4.79e-64!165;CL:0000837!4.79e-64!165;CL:0000988!3.13e-63!182;CL:0000738!3.00e-60!140;CL:0002031!1.44e-49!124;CL:0002087!3.36e-49!119;CL:0000763!3.50e-46!112;CL:0000049!3.50e-46!112;CL:0000766!4.32e-39!76;CL:0000557!6.16e-35!71;CL:0000839!1.04e-33!70;CL:0002009!4.00e-33!65;CL:0002194!1.88e-32!63;CL:0000576!1.88e-32!63;CL:0000040!1.88e-32!63;CL:0000559!1.88e-32!63;CL:0002057!4.13e-26!42;CL:0000860!5.75e-26!45;CL:0000542!5.06e-15!53;CL:0000051!5.06e-15!53;CL:0000838!1.35e-14!52;CL:0000945!1.83e-10!24;CL:0000826!1.83e-10!24;CL:0000134!1.19e-09!358;CL:0002320!5.91e-08!365;CL:0000236!1.01e-07!14;CL:0000219!8.51e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.30e-20;33!CL:0002057;4.30e-20;33!CL:0000473;4.51e-20;39!CL:0000234;4.51e-20;39!CL:0000576;2.08e-19;48!CL:0000766;1.05e-16;69!CL:0002087;6.17e-14;104!CL:0000763;1.17e-13;100!CL:0000738;4.05e-13;136!CL:0000945;1.52e-10;24!CL:0000988;1.56e-10;177!CL:0000542;4.80e-09;53!CL:0000236;1.67e-07;13!CL:0000094;8.03e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.92e-68,168;CL:0002032,7.20e-64,161;CL:0000837,7.20e-64,161;CL:0000988,1.25e-62,177;CL:0000738,3.70e-60,136;CL:0002031,2.12e-49,120;CL:0002087,4.65e-49,115;CL:0000763,4.95e-46,108;CL:0000049,4.95e-46,108;CL:0000766,4.02e-39,72;CL:0000557,6.56e-35,67;CL:0000839,1.18e-33,66;CL:0002009,4.00e-33,61;CL:0002194,1.84e-32,59;CL:0000576,1.84e-32,59;CL:0000040,1.84e-32,59;CL:0000559,1.84e-32,59;CL:0000473,3.52e-30,48;CL:0000234,3.52e-30,48;CL:0000860,2.31e-26,42;CL:0002057,2.31e-26,42;CL:0000542,3.68e-15,53;CL:0000051,3.68e-15,53;CL:0000838,9.89e-15,52;CL:0000945,1.48e-10,24;CL:0000826,1.48e-10,24;CL:0000134,6.47e-09,354;CL:0000236,8.70e-08,14;CL:0002320,2.60e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-19;42!CL:0000049;1.14e-13;108!CL:0000051;4.80e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!2.42e-10!51;DOID:0060083!2.42e-10!51;DOID:1240!2.70e-09!39;DOID:8692!2.70e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.21e-07;39!DOID:8692;2.25e-07;31!DOID:2531;8.61e-07;51!DOID:0060083;8.61e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.09e-10,51;DOID:0060083,3.09e-10,51;DOID:1240,2.25e-09,39;DOID:8692,2.36e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.98e-39!102;UBERON:0003061!1.98e-39!102;UBERON:0002193!4.61e-39!112;UBERON:0002371!9.10e-31!80;UBERON:0001474!1.39e-27!86;UBERON:0002405!2.86e-27!115;UBERON:0004765!2.07e-19!101;UBERON:0001434!2.07e-19!101;UBERON:0003081!4.93e-16!216;UBERON:0002384!2.09e-07!375;UBERON:0000178!2.94e-07!15;UBERON:0000179!2.94e-07!15;UBERON:0000463!2.94e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.72e-07;15!UBERON:0000179;2.72e-07;15!UBERON:0000463;2.72e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.06e-39,98;UBERON:0003061,4.06e-39,98;UBERON:0002193,1.09e-38,108;UBERON:0002405,5.31e-32,93;UBERON:0002371,1.98e-30,76;UBERON:0001474,3.07e-27,82;UBERON:0004765,1.59e-21,90;UBERON:0001434,1.46e-16,100;UBERON:0003081,4.30e-16,203;UBERON:0000178,2.57e-07,15;UBERON:0000179,2.57e-07,15;UBERON:0000463,2.57e-07,15;UBERON:0002384,8.48e-07,371 | |||
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| ||
|short_description=p3@GRB2 | |||
}} | }} |
Latest revision as of 10:53, 17 September 2015
Short description: | p3@GRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRB2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 8bp_to_ENST00000316804_5end |
EntrezGene: | GRB2 |
HGNC: | 4566 |
UniProt: | P62993 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 9.92e-68 | 168 |
hematopoietic oligopotent progenitor cell | 7.20e-64 | 161 |
hematopoietic multipotent progenitor cell | 7.20e-64 | 161 |
hematopoietic cell | 1.25e-62 | 177 |
leukocyte | 3.70e-60 | 136 |
hematopoietic lineage restricted progenitor cell | 2.12e-49 | 120 |
nongranular leukocyte | 4.65e-49 | 115 |
myeloid cell | 4.95e-46 | 108 |
common myeloid progenitor | 4.95e-46 | 108 |
myeloid leukocyte | 4.02e-39 | 72 |
granulocyte monocyte progenitor cell | 6.56e-35 | 67 |
myeloid lineage restricted progenitor cell | 1.18e-33 | 66 |
macrophage dendritic cell progenitor | 4.00e-33 | 61 |
monopoietic cell | 1.84e-32 | 59 |
monocyte | 1.84e-32 | 59 |
monoblast | 1.84e-32 | 59 |
promonocyte | 1.84e-32 | 59 |
defensive cell | 3.52e-30 | 48 |
phagocyte | 3.52e-30 | 48 |
classical monocyte | 2.31e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.31e-26 | 42 |
lymphocyte | 3.68e-15 | 53 |
common lymphoid progenitor | 3.68e-15 | 53 |
lymphoid lineage restricted progenitor cell | 9.89e-15 | 52 |
lymphocyte of B lineage | 1.48e-10 | 24 |
pro-B cell | 1.48e-10 | 24 |
mesenchymal cell | 6.47e-09 | 354 |
B cell | 8.70e-08 | 14 |
connective tissue cell | 2.60e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.06e-39 | 98 |
blood island | 4.06e-39 | 98 |
hemolymphoid system | 1.09e-38 | 108 |
immune system | 5.31e-32 | 93 |
bone marrow | 1.98e-30 | 76 |
bone element | 3.07e-27 | 82 |
skeletal element | 1.59e-21 | 90 |
skeletal system | 1.46e-16 | 100 |
lateral plate mesoderm | 4.30e-16 | 203 |
blood | 2.57e-07 | 15 |
haemolymphatic fluid | 2.57e-07 | 15 |
organism substance | 2.57e-07 | 15 |
connective tissue | 8.48e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.09e-10 | 51 |
immune system cancer | 3.09e-10 | 51 |
leukemia | 2.25e-09 | 39 |
myeloid leukemia | 2.36e-07 | 31 |