Coexpression cluster:C4873: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Coexpression_clusters
|full_id=C4873_lymphangiectasia_Eosinophils_Mast_Neutrophils_CD4_b_H9
|id=C4873
}}") |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=-0.117431064987205,-0.117431064987205,-0.060162775910959,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.0618370231534155,0.112455763024034,-0.117431064987205,-0.117431064987205,-0.0667550403806143,-0.117431064987205,0,0,0,0,-0.0670044948155168,0.080626736260243,0,-0.117431064987205,0.0319799804193167,0.0213855080549017,0.229433076735535,0.279463088916466,0.338588299847423,0.932850884649604,0.286601304986938,0.261574261496983,0.283170292813857,0.087343079589926,0,0.577246705912533,0.759927879375967,0.407458601813904,0,0.506718056500894,0.283810221663037,0.0762437484553633,0.099470094751145,-0.0145256203642379,0.061217623997839,0,0.17177561896448,0.229755313179946,0.143197336325664,0.209357552049835,0.377328023694476,0.179644101405436,0.092187879276543,0.0112090930343374,0.216293844171574,0.25442425645425,0.179631792538661,-0.0126346801980486,0.04377126540427,0.282905586573266,0,0.433695348863452,0.220030274432855,0.0789870938765965,0.154187968871398,0.481652511202126,0.431710365575549,0.542985799592082,0.281808489652273,0,0.217896074132256,0.449663264052159,0.122257545827896,0.502144719472308,0.0832356854652995,0.153878434287253,0.0944836039059936,0.0086957600506132,0.204311999163507,0,0.0784756377297733,0.0858058684368491,0.203957089249832,0.873786689147381,0.565883520638231,0.741500834947427,0.698643970727977,0.615312873033994,0.630603343479374,0.833543830445045,0.565274802612196,0.669527287633516,0.874174092451146,0.890084464424297,0.248377521609406,0.326544175202668,0.195071327486666,0.72149940764305,0.917007634829149,0.785140225780005,0.523825898440348,0.698191739568324,0.466977831703329,0.835360880413691,0.904112565393992,0.661320575146998,0.683066987759188,0.586896048184555,1.18545388813531,1.20806815545764,0.968279598333094,0.863337924693399,0.590845272730298,0.52706571729568,0.605256585780792,0.794263256104132,0.255427956781526,0.247099133217323,0.529587341409999,0.657273489694856,0.967137688733387,0.827692776405773,0.70881951145996,0.46926055486991,0.464143776837296,0.559072492052372,0.610458326434989,0.883974119368378,0.584321206981199,0.626586646932623,0.685923811693007,-0.117431064987205,0,0.0235756229822423,0.0027591703565637,-0.117431064987205,-0.0586837970328928,-0.117431064987205,-0.117431064987205,0,0.0453330763297559,0.0702852779578603,0.0838037393662953,0,0.0489884057097234,0.0389266744444898,0.0650946327629524,0.145778561516109,0.842024438488066,0.213791654256146,0.207750437461633,0,-0.117431064987205,0,0,0,-0.0118806742640966,-0.0350065722404434,-0.0176065715462476,-0.117431064987205,0,-0.117431064987205,-0.117431064987205,0,-0.117431064987205,0,-0.117431064987205,-0.117431064987205,-0.117431064987205,0,0,-0.044372263887826,0.892216502997807,1.10034785096675,0.235926435437086,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,0.0144019295533518,-0.117431064987205,0,0.0957506546513297,-0.117431064987205,-0.0625459255212955,0,-0.0562208979545112,-0.117431064987205,-0.0260027951652514,-0.0941594861223636,-0.117431064987205,-0.117431064987205,-0.025810177652944,-0.117431064987205,-0.117431064987205,-0.117431064987205,0.0561448062383851,-0.0747272986244268,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,0,-0.0662327915929444,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,0,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.0433035871225761,-0.0496996564493025,-0.0401089500849466,-0.0196762943127897,-0.0791885821039247,-0.117431064987205,-0.117431064987205,-0.0757415430129732,-0.049408338436372,0,-0.117431064987205,-0.0424028273458357,1.0267751757354,0.817317431636163,1.03182402461042,0.864708269815438,0.969722795995933,0.693785928415566,0,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,0.22163619877409,0.177754045794409,0.175720174398001,0.158716988307714,0.26949176189589,0.116024965323513,0.187330388394593,0.0778115911724362,0.287229690671457,-0.102656826065411,0,-0.117431064987205,-0.104305109383062,-0.117431064987205,0,-0.10248138155405,0.248877802242317,0,0,0.0452252653904662,0.0295030218227452,-0.00295789030214019,0.0384566032530418,0.00504967026991884,0,0,0,-0.0692190188293988,0.110162914233654,0.0897408331528697,0.0226079585011517,0.252902619716208,0,0,-0.026114404217669,-0.0572504705011786,-0.0805192828311514,-0.117431064987205,-0.0598504984203745,-0.0140804885933382,-0.00662798385692984,0.0235112687451761,-0.117431064987205,0.0911013972243447,0.635207182951188,1.13449986008158,0.44207100567474,-0.0191364455590552,0,0,-0.0447337011675162,-0.000663153610160755,-0.0831543082377615,-0.117431064987205,-0.071275085427619,-0.117431064987205,-0.0866944441292836,0.0249005582890673,-0.0271530530552222,-0.117431064987205,-0.0150185885970126,-0.081051899787431,-0.0538213792115398,0.192265197341811,0.0259537881832583,-0.117431064987205,-0.117431064987205,-0.117431064987205,0,-0.117431064987205,0,0,0,0.0173953514281144,-0.0192121030590571,0.0593131977979694,0,-0.117431064987205,-0.117431064987205,-0.117431064987205,0,-0.0362723804161635,-0.117431064987205,0.78897747044587,0.457575475303184,0.78020055588885,0.568336738416923,-0.0191007587737794,-0.117431064987205,-0.117431064987205,-0.0501681253030185,-0.117431064987205,1.04340126962726,1.22383133296868,0.5423888076298,-0.117431064987205,0.0587095621659399,-0.00325867226856658,-0.0353746065539194,-0.0461276475818624,-0.117431064987205,-0.0260163773906404,-0.00317176156608429,-0.117431064987205,-0.117431064987205,0,-0.0439439716621159,-0.0478490849509581,0,-0.0998523510114139,0.30649345092785,0.625293926305873,0.315160004666272,0.280892986574299,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.0650683943941281,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.0217800819655038,-0.104004380529212,-0.0696850087426533,0.0163356729672224,0.0748462705198778,-0.0440199527316573,-0.0276570044375574,-0.117431064987205,-0.0162860882023892,0.0442960888852391,0,0.134048924029603,0,0.0358405971647027,-0.00395282156947818,-0.117431064987205,-0.0325275216585974,0,0.140928245600206,0.0591491583476896,0.061474705700461,0.145275307481162,0,0.403946977155402,0.597147396836641,0,0,-0.117431064987205,0.0425916600387234,-0.0110965115172506,0.0572266856041098,-0.0883401786498608,0,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.0613511761838947,-0.117431064987205,-0.117431064987205,-0.049076991314934,-0.080390409565714,-0.117431064987205,0,-0.117431064987205,-0.0374125967185666,-0.117431064987205,-0.117431064987205,0.0779325527639767,0,-0.117431064987205,-0.117431064987205,0,-0.0593373851955425,-0.117431064987205,0,-0.117431064987205,0.0620620070372935,-0.117431064987205,-0.117431064987205,0,-0.0455960017162548,0,-0.117431064987205,0,-0.117431064987205,-0.117431064987205,0.148567970435406,0.228641571543789,0,-0.117431064987205,-0.117431064987205,-0.117431064987205,0,0,0.273441543989027,-0.0388512098269793,0,-0.0371977936244904,0,0.194067664482614,-0.0592285652538675,-0.117431064987205,0.0150434931775911,-0.117431064987205,-0.117431064987205,-0.117431064987205,0.0222821943051277,-0.0227955346933595,0,0.105364007787858,0.114272995631963,0.0315386846059429,0.0380584282740251,0,0,-0.0162923965044248,0.586683477206342,0.490939710362298,0.744854268462071,0.625011544314297,0.554875615999503,0.626024854733208,0.382273299589924,0.793093375931306,0.0440785955756708,-0.070119007952989,0.0857560976197675,0.788932030191804,0.0387568232753321,0.108756887213313,0.137148758599576,0.203777328768159,0.140825552791593,0.0960922031768573,0.122091944173996,0.193568230737617,0.16166097683426,0.0632131871850751,0,0.339270362341365,0.255981364541884,0.147243178344539,0.0366416290257379,0.190175358322382,0.116355582210209,0.160574230329875,0.104607837966864,0.250798596099854,0.192236267526027,0.231043974942395,0.586447733449521,0.124853596121007,0.70470301534738,0.0745021362340714,-0.117431064987205,0.177230037185476,0.774554752294349,0.397526772720604,0.0929817338882301,-0.113627046291906,0,0.316082844651004,0,0.0747302042348475,0.423155920560548,0.347806980813191,0.145661221236375,0.458084589566085,0.324032998294006,-0.0012199293945418,0.994477237802905,-0.109260360128057,0.0945109358771792,-0.117431064987205,0.286498431571326,0.078198198554358,0.79556070442493,0,0.350719088229388,0.0480626908776015,0,-0.114434742134082,-0.0810177737057413,-0.0491650766138954,0.0454837997403604,-0.0105371778061352,0.0921546695012139,0.317730895142426,0.441810031913556,-0.117431064987205,0,0,0,0.0455495587624001,0.0842651109256346,0.0861409897892114,0,0,0.0842264732922906,-0.117431064987205,-0.027326893025212,-0.0425116096107916,0.0710015227266897,0.291591597755179,-0.0119914698072177,0.197713872504992,-0.117431064987205,0.588559725348102,0.145271133229992,0.330465458458248,0.407970159540057,0.454240611540942,0.612084895540091,0.0640596705171081,0.0955535755370465,0.100823720884483,0,0.085072355470482,0.299999916441319,0.265543798126517,0.207103666835013,0.276361465052443,0.618830091800248,0.569527868099382,-0.0374531134892922,-0.117431064987205,0.0812660497646291,0.612967219153111,0,0.31384625900953,-0.117431064987205,0,0.0730370483188094,0.0781030776568173,0.060819961675157,0.168844311250294,0.149476139300635,0,0,0,0.0782525183892874,-0.0111213750044862,0.228974662664494,-0.00550444350015497,0.0395104194949616,0.0475043407511753,0.163598344441537,0.19734588036883,0.138801252351508,0.214929901546052,0.171710392485972,-0.117431064987205,0,-0.0616545868367945,-0.0387152658045001,0.00200760524540583,-0.117431064987205,-0.0528541700413757,0.214938901586878,0,0,-0.0278533187326947,0.128137448453047,0,0,0,-0.117431064987205,-0.0742249070192033,-0.0368058638990472,0.084218776243926,0,-0.0123261526510231,0,0,0.831305575458082,-0.117431064987205,-0.0278224964081025,-0.117431064987205,-0.117431064987205,-0.0601223152673298,-0.109502940055153,-0.0493711607799547,0,0,0.0921412740193889,0.0959526682714145,0.103671762731433,0.106619764466633,0.0847065483475893,0.270290062330493,0,0.682243962251292,0.855230162686753,0.92279805318207,0.500578778818196,0.856753995168062,0.0727088341078527,0,0.0246236635237791,0.0384241894372233,0,0.0716196360387782,0,0,-0.00810642809137607,0,-0.117431064987205,0,0.00530478998262461,0,0.64923891572212,-0.117431064987205,0.0775160950959413,0.0325065991249827,0.44487819267529,0,-0.0583186945759055,0,-0.117431064987205,0.242420138846268,0.0503625256821274,0.350774507210926,0.599555168471049,1.74665408977422,0.583199607249202,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.00137298588232934,-0.117431064987205,0.00120005782530277,0.0308256323612375,0.0438406847166337,0,0,0.00935920640060162,0,0.0333394638354602,-0.0205346661348472,0,0.0787259529205487,0.121768612171331,0,-0.00689453133649359,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.0199766484728534,-0.117431064987205,-0.0279357011669741,-0.117431064987205,-0.0546847189639629,-0.0575439779089181,-0.0532364402024578,0.321678776674695,-0.0547502169301509,-0.117431064987205,-0.117431064987205,0.291696123195293,-0.0566359501665853,0.0227013527320421,-0.117431064987205,-0.117431064987205,0.136850489810659,0.06363783878562,0.0281058936217239,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,0.113529909826538,-0.117431064987205,-0.0167179442932841,-0.0560327807071546,-0.0269887232044788,-0.117431064987205,0.200320404914512,-0.117431064987205,-0.0313261724991483,-0.0253667649001401,-0.0408219155747567,0.00898768105717149,-0.0183579223164818,-0.117431064987205,0.0887793257474208,-0.0114045055415192,0.469616316084648,0.318292758647848,0.478525341878234,0.123070465553216,-0.0219921827472825,0,0.581517043154231,0.459369101490947,0.94991244160713,-0.117431064987205,0,-0.0103028673067698,0,-0.0185144794369106,0.0444710875952832,-0.0650115177681692,0.039976907335608,0.141463850275122,-0.0337224835837928,0.00137359897834233,0.310044455036056,0,0.0274913422627341,-0.117431064987205,0,-0.00140626519825697,0.0270351810347199,0,-0.053110177563468,0.17400636619512,0.104198237721867,0.0562622698659916,0.057100863670152,0,0.0406607636248659,0,-0.117431064987205,-0.117431064987205,-0.117431064987205,-0.117431064987205,0,0.0608566712043477,0.0880751440792298,0,0.193819735432574,0.065867873206635,0,0,-0.0196138911900539,0,0.00218077707370808,0,-0.0388916077972461,0,0.18401355397829,-0.117431064987205,-0.117431064987205,-0.0787410669186543,-0.091925569204582,-0.0727012781803034,-0.080521896583901,0.730692786213729,0.15148373989708,0.0553551885028491,0.0844997119803704,0,0.158996549244932,-0.0541028914370383,0.0633767449113307,0.147579431078894,0,0,0.173827505021629,0,-0.0537174007031543,0.261855793914252,-0.117431064987205,-0.117431064987205,0,0.00423598762991029,-0.0679646306600428,0.269619104017235,-0.025179346063766,0.0319969445005559,0.102726870059132,0.152141665378994,0.117339711759041,-0.117431064987205,-0.0227222093078689,0.15750045624764,0,-0.117431064987205,-0.117431064987205,0,0,0.106923005889852,0.0280455215461098,0.0926645762275616,-0.0709569400416793,0.207396509408181,0.126800079495168,0.231804979979955,0.0858467613960337,0.168419176921202,0,-0.117431064987205,0.0421803109603414,0,0.0656759287358022,-0.117431064987205,0.308313175233813,0.203915475280326,0.75157957658405,0.0688645206982443,0,-0.0527923819395992,-0.117431064987205,0.165294923331026,-0.00796079599624594,0.00167402413239799,0.0711970815585876,0.0398294224716622,0.056633048372567,-0.117431064987205,0,-0.117431064987205,0.324472913358633,0.0450355340939671,0,0.420102423928664,0.340529790028054,0.57482350688946,0.485549790595897,0.139530721565415,0.115053409467385,0,-0.0357720155078576,0.154262022540406,-0.010470627862194,0.216400568669148,0.18211881748633,0.0174404719809138,-0.0415406450501413,-0.117431064987205,-0.0294388014564142,-0.117431064987205,0.390777729778578,0.184490679795182,-0.117431064987205,0.0655074646802949,0.0882932822351863,-0.117431064987205,0.139869874007468,-0.080006544358508,-0.0224421355487639,0,-0.117431064987205,0.448932548847664,0.770857316916989|full_id=C4873_lymphangiectasia_Eosinophils_Mast_Neutrophils_CD4_b_H9|id=C4873|ontology_enrichment_celltype=CL:0000037!3.56e-46!168;CL:0000566!3.56e-46!168;CL:0000988!4.10e-45!177;CL:0002032!2.95e-43!161;CL:0000837!2.95e-43!161;CL:0000738!1.17e-36!136;CL:0002031!4.97e-29!120;CL:0002087!4.57e-28!115;CL:0002242!4.89e-26!55;CL:0000542!4.06e-25!53;CL:0000051!4.06e-25!53;CL:0000838!1.65e-24!52;CL:0000763!1.12e-18!108;CL:0000049!1.12e-18!108;CL:0000945!1.58e-12!24;CL:0000826!1.58e-12!24;CL:0000084!1.04e-11!25;CL:0000827!1.04e-11!25;CL:0000791!5.91e-11!18;CL:0000789!5.91e-11!18;CL:0002420!5.91e-11!18;CL:0002419!5.91e-11!18;CL:0000790!5.91e-11!18;CL:0000766!9.86e-10!72;CL:0000236!2.18e-08!14;CL:0000839!2.33e-07!66;CL:0000557!2.57e-07!67;CL:0000625!2.75e-07!11;CL:0000860!3.94e-07!42;CL:0002057!3.94e-07!42;CL:0002009!9.33e-07!61|ontology_enrichment_disease=DOID:2531!4.23e-12!51;DOID:0060083!4.23e-12!51;DOID:1240!1.94e-09!39;DOID:8692!4.63e-08!31|ontology_enrichment_uberon=UBERON:0002390!9.80e-14!98;UBERON:0003061!9.80e-14!98;UBERON:0002193!1.46e-12!108;UBERON:0000178!2.05e-08!15;UBERON:0000179!2.05e-08!15;UBERON:0000463!2.05e-08!15;UBERON:0002405!1.31e-07!93|tfbs_overrepresentation=0.147255,0.0586687,0.716932,0.0477154,0.199763,0.0460856,0.0430074,0.414564,0.03272,0.0257057,0.139423,0.225367,0.188771,0.125978,0.148679,0.0619003,0.140982,0.0982016,0.0528514,0.108057,0.188635,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.209392,0.0907212,0.143747,0.0933697,0.0226057,0.114046,0.0180314,0.208242,0.0665252,0.0844722,0.688181,0.0429682,0.120351,0.0667043,0.0964797,0.0246116,0.140039,0.184019,0.120917,0.0362416,0.0380166,0.18151,0.111283,0.121201,0.154071,0.0541794,0.0701653,0.0929951,0.198787,0.0384161,0.107455,0.212709,0.0783235,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.352278,0.0600088,0.0860723,0.167053,0.378921,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.291327,0.251834,0.064341,0.209032,0.608896,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.58489,0.153631,0.00444039,0.0415725,0.0574857,0.276221,0.141874,0.0370665,0.219088,0.0409286,0.0669887,0.338096,0.144217,0.269326,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.139021,0.0838393,0.16671,0.214708,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,0.596561,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.200647,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.147788,0.273479,0.114283,0.0400322,0.127369,0.0403542,0.312091,0.179689,0.137725,0.46397,0.0541353,0.0799324,0.090079,0.140334,0.181817,0.178449,0.0356339,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.187297,0.122935,0.228812,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.27358,0.15185,0.206299,0.178359,0.0458667,0.104357,0.121154,0.1129,0.312578,0.169057,0.164202,0.100942,0.062995,0.10299,0.14193,0.37245,0.15606,0.161026,0.0738599,0.126611,0.0101199,0.085973,0.060453,0.059896,0.569726,0.384785,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.0381183,0.163502,0.214803,0.182472,0.348993,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.372804,0.117027,0.159052,0.185164,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.0219021,0.0695832,0.582402,0.0619218,0.1751,0.163376,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.278352,0.063292,0.254773,0.446759,0.0865903,0.0380459,0.130174,0.584917,0.713218,0.782949,0.635872,0.563047,0.823736,0.807281,0.0638737,0.261644,0.261553,0.446302,0.373681,0.309233,0.49143,0.330703,0.395854,0.329568,0.53472,0.615744,0.271958,0.292154,0.405773,0.39729,0.581713,0.0139202,0.187251,0.362792,0.0176124,0.423979,0.109988,0.330894,0.218329,0.427027,0.0821552,0.463191,0.647576,0.528324,0.520763,0.370782,0.415647,0.142924,0.253571,0.276829,0.301787,0.481778,0.316882,0.223503,0.503224,0.603208,0.283727,0.314747,0.577664,0.291709,0.448095,0.576651,0.0175396,0.292835,0.476744,0.115044,0.373868,0.57762,0.608919,0.18237,0.0359955,0.821217,0.747852,0.275351,0.236471,0.185661,0.346319,0.535598,0.270984,0.0772647,0.503058,0.0367769,0.522083,0.248634,0.281576,0.472384,0.163244,0.0670502,0.0730934,0.184794,0.596648,0.762864,0.581837,0.1002,0.305671,0.546839,0.551561,0.448039,0.218623,0.312808,0.695172,0.0451077,0.0747529,0.229003,0.650179,0.061213,0.50215,0.294698,0.34331,0.477304,0.289204,0.327108,0.683186,0.278044,0.807485,0.428671,0.228096,0.0642385,0.19763,0.0129079,0.20495,0.104858,0.48267,0.420626,0.165111,0.858756,0.335105,0.144809,0.145539,0.385517,0.0818086,0.119597,0.459928,0.252232,0.152681,0.0465712,0.137098,0.0369524,0.134788,0.0985856,0.18767,0.293698,0.284593,0.343734,0.306556,0.305777,0.2348,0.503082,0.522888,0.284629,0.262537,0.359455,0.226257,0.405955,0.41707,0.363685,0.464871,0.753577,0.206222,0.171685,0.651524,0.113671,0.269226,0.339277,0.552319,0.281425,0.141758,0.455379,0.168058,0.159617,0.238587,0.372281,0.232251,0.189515,0.0891382,0.0595618,0.171389,0.625309,0.347298,0.182325,0.34988,0.475069,0.404569,0.0847452,0.630264,0.0562865,0.0697683,0.0556835,0.192544,0.0779981,0.0575676,0.144322,0.223391,0.203656,0.116981,0.441735,0.191777,0.111931,0.28934,0.0435386,0.303336,0.126478,0.134852,0.10689,0.273326,0.0627924,0.381386,0.0179103,0.303939,0.279795,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.210369,0.193675,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.111277,0.219383,0.332809,0.19559,0.132201,0.0190418,0.0481795,0.199971,0.406014,0.127758,0.175785,0.0181729,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.107043,0.275244,0.00481323,0.173708,0.141119,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.153187,0.0797897,0.0974211,0.160149,0.123526,0.0906475,0.0558058,0.28262,0.0377931,0.137332,0.0145999,0.0656973,0.211746,0.220538,0.0801488,0.0757897,0.161801,0.193215,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.174921,0.370421,0.0330727,0.348757,0.219556,0.0394698,0.0596469,0.419264,0.122476,0.108872,0.11002,0.26144,0.0286025,0.549354,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.217069,0.190048,0.131088,0.090504,0.237101,0.286988,0.0761239,0.0158143,0.0818785,0.182701,0.335058,0.147698,0.141463,0.167267,0.140622,0.0889592,0.0538132,0.28711,0.0473033,0.094881,0.445524,0.132886,0.0774373,0.109194,0.128564,0.131452,0.323837,0.120459,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.00452901,0.144075,0.0340203,0.0741807,0.277091,0.389379,0.655293,0.21727,0.289306,0.119215,0.192475,0.177967,0.547859,0.057571,0.047591,0.0899568,0.0608699,0.175319,0.300597,0.0713214,0.223874,0.291114,0.0355833,0.125606,0.175094,0.43617,0.76084,0.206454,0.218192,0.108277,0.0673484,0.108748,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,0.226171,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.0266106,0.057168,0.234298,0.0759837,0.286863,0.152372,0.194941,0.218271,0.101607,0.327067,0.172982,0.340936,0.151597,0.0626744,0.191335,0.148574,0.034431,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.15063,0.0973823,0.15503,0.170295,0.193653,0.137219,0.0282663,0.251466,0.288096,0.11903,0.0838874,0.331451,0.113145,0.112651,0.186638,0.174776,0.0948451,0.264079,0.249049,0.140533,0.0997756,0.257598,0.103667,0.113069,0.025556,0.16791,0.09066,0.220462,0.166967,0.188651,0.0813902,0.184948,0.156261,0.311847,0.511859,0.0590944,0.247324,0.178389,0.218229,0.231073,0.0972686,0.619906,0.0360851,0.412187,0.131093,0.0434602,0.133616,0.418146,0.36927,0.449036,0.0973145,0.231447,0.544776,0.115047,0.37006,0.10748,0.448797,0.197484,0.396996,0.36145,0.406019,0.0841307,0.0119618,0.0210246,0.11074,0.722159,0.390366,0.0305485,0.50058,0.0217093,0.169835,0.3468,0.60734,0.227104,0.518585,0.617852,0.38649,0.284625,0.156746,0.55194,0.375373,0.28907,0.164197,0.462688,0.287881,0.21103,0.138768,0.0642229,0.468444,0.258219,0.119142,0.243383,0.191695,0.390974,0.382874,0.109758,0.161598,0.405056,0.0868402,0.496032,0.476802,0.0805771,0.200632,0.477353,0.452741,0.399222,0.185744,0.20342,0.200493,0.20558,0.300504,0.25656,0.425963,0.00960524,0.383291,0.156104,0.141318,0.411941,0.0961477,0.314438,0.354789,0.163828,0.230581,0.120226,0.28424,0.20075,0.314429,0.181415,0.0442318,0.0674279,0.0727621,0.408413,0.165147,0.322213,0.0234043,0.33942,0.61031,0.387276,0.0391112,0.0816402,0.537348,0.222037,0.416621,0.416292,0.128937,0.382478,0.215157,0.204817,0.122646,0.138871,0.673493,0.166905,0.19783,0.0833851,0.316453,0.48065,0.175199,0.332919,0.373557,0.523625,0.408861,0.0768488,0.534741,0.39088,0.363192,0.236011,0.203486,0.0413386,0.0816179,0.4466,0.351067,0.275347,0.269604,0.305885,0.241132,0.0795725,0.0527347,0.303709,0.15059,0.386538,0.508064,0.250964,0.383276,0.457886,0.504711,0.220231,0.00608438,0.196976,0.191517,0.463751,0.0663581,0.307334,0.459728,0.283463,0.201728,0.472935,0.399569,0.273281,0.0780405,0.275089,0.0858306,0.47795,0.359231,0.339729,0.197805,0.608187,0.0870376,0.332774,0.173874,0.299887,0.266492,0.205413,0.17639,0.0779009,0.0424553,0.022685,0.0337138,0.18966,0.258854,0.188263,0.0719199,0.264884,0.162568,0.19104,0.163057,0.219428,0.208013,0.0900729,0.0953646,0.166124,0.0348699,0.378361,0.0358457,0.20753,0.119514,0.179412,0.193601,0.0264253,0.222977,0.00893033,0.0542164,0.21801,0.0211771,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.12405,0.179889,0.0279371,0.27872,0.0855609,0.131118,0.20837,0.0335483,0.222339,0.00231953,0.20847,0.266544,0.0066506,0.145701,0.229428,0.162145,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.350452,0.0126763,0.120196,0.0986735,0.108462,0.0595618,0.21593,0.158479,0.220319,0.0204324,0.124213,0.259632,0.30793,0.180606,0.159884,0.257294,0.0119784,0.217112,0.123917,0.184317,0.185335,0.0723291,0.00356871,0.261744,0.0223377,0.21382,0.207559,0.141867,0.193031,0.249101,0.115972,0.224568,0.246105,0.173026,0.200432,0.139785,0.0208458,0.240478,0.156465,0.13108,0.036274,0.222798,0.172134,0.0166394,0.0969345,0.202137,0.310405,0.280943,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.319922,0.261724,0.211332,0.187731,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.00954842,0.204393,0.295769,0.286691,0.347036,0.141729,0.263159,0.255956,0.200105,0.227491,0.29837,0.253509,0.177664,0.28365,0.264413,0.131761,0.160658,0.206239,0.19924,0.28689,0.236464,0.00756988,0.115817,0.218052,0.0271615,0.11528,0.194982,0.190993,0.281727,0.0445413,0.249955,0.0143647,0.224257,0.0935776,0.327622,0.225752,0.207791,0.0958756,0.0859274,0.316866,0.171683,0.158847,0.0406636,0.071111,0.0404514,0.101021,0.222548,0.175934,0.157274,0.0251447,0.252796,0.205954,0.361435|tfbs_overrepresentation_for_novel_motifs=0.699513,0.14394,0.690871,0.855819,0.641468,0.853988,0.937929,0.494933,0.491742,0.221898,0.820209,0.985163,0.436625,0.925331,0.639839,1.60265,1.17594,0.575162,0.452865,0.305559,0.69094,0.242883,0.845342,0.635379,0.743951,1.00973,0.409304,0.842925,0.645155,0.388328,0.795576,1.21459,0.534793,1.11965,0.599922,0.137917,0.596053,0.855276,1.39264,0.469078,0.598234,0.777097,0.718382,0.63803,0.151453,0.726632,0.939121,0.808003,0.69206,0.645308,1.02504,0.951993,0.336258,1.29475,1.45259,0.928548,0.650353,0.892517,1.0078,0.891404,1.25741,0.941709,0.492369,1.14672,0.961293,1.11026,1.54311,1.91674,1.2037,1.75271,0.762094,0.502203,0.886337,1.45054,0.430728,0.414196,0.396746,1.12884,1.20029,0.73687,0.459024,1.14559,0.960908,0.498519,1.39759,0.169933,0.303648,0.381882,1.053,2.0169,1.63834,1.36973,1.23218,0.543775,0.642354,0.560075,0.450952,1.27663,1.05794,0.360456,0.569121,1.22626,1.27082,1.1798,1.09802,0.815119,1.16312,0.921547,0.743661,0.622396,0.703975,1.26794,0.684398,0.830777,1.58942,0.594137,0.188952,0.794219,1.10778,1.35006,1.44203,1.0504,0.850918,0.973172,1.70203,1.12965,0.930979,1.2374,1.48578,2.36206,1.37044,0.798812,1.50051,0.969553,1.65144,0.372828,0.788803,0.843556,1.60823,2.47382,2.06967,1.57016,0.932872,1.27296,1.09989,0.883164,1.08214,2.31409,0.773313,0.539692,0.318511,0.698641,1.37083,0.481626,0.941179,1.78371,1.03563,1.51317,0.744018,0.710709,1.56892,1.35169,1.19946,0.714443,1.11698,0.960047,1.3017,0.936473,0.0768232|tfbs_overrepresentation_jaspar=MA0003.1;0.0471418,MA0004.1;0.826076,MA0006.1;0.639288,MA0007.1;0.804807,MA0009.1;1.3275,MA0014.1;0.118426,MA0017.1;0.686276,MA0019.1;0.990656,MA0024.1;1.21731,MA0025.1;1.46617,MA0027.1;2.95767,MA0028.1;0.658629,MA0029.1;1.23771,MA0030.1;1.22561,MA0031.1;1.15713,MA0038.1;0.94098,MA0040.1;1.24388,MA0041.1;0.847069,MA0042.1;0.810843,MA0043.1;1.32783,MA0046.1;1.31611,MA0048.1;0.341392,MA0050.1;0.81185,MA0051.1;0.936307,MA0052.1;1.24796,MA0055.1;0.190716,MA0056.1;0,MA0057.1;0.333427,MA0058.1;0.716037,MA0059.1;0.714521,MA0060.1;0.492218,MA0061.1;0.456531,MA0063.1;0,MA0066.1;0.941452,MA0067.1;1.65513,MA0068.1;0.405474,MA0069.1;1.31207,MA0070.1;1.30033,MA0071.1;0.897953,MA0072.1;1.29561,MA0073.1;0.211629,MA0074.1;0.935474,MA0076.1;0.734647,MA0077.1;1.28751,MA0078.1;1.04495,MA0081.1;0.714712,MA0083.1;1.33535,MA0084.1;1.84562,MA0087.1;1.29304,MA0088.1;0.257905,MA0089.1;0,MA0090.1;0.751469,MA0091.1;0.829044,MA0092.1;0.785956,MA0093.1;0.642957,MA0095.1;0,MA0098.1;0,MA0100.1;0.956299,MA0101.1;0.646932,MA0103.1;0.628063,MA0105.1;0.31555,MA0106.1;0.986396,MA0107.1;0.556367,MA0108.2;1.15387,MA0109.1;0,MA0111.1;0.767139,MA0113.1;1.00436,MA0114.1;0.549955,MA0115.1;1.57693,MA0116.1;1.3784,MA0117.1;1.36676,MA0119.1;0.695578,MA0122.1;1.39371,MA0124.1;1.53432,MA0125.1;1.44766,MA0130.1;0,MA0131.1;1.06461,MA0132.1;0,MA0133.1;0,MA0135.1;1.35921,MA0136.1;0.948776,MA0139.1;0.440097,MA0140.1;0.894983,MA0141.1;0.712476,MA0142.1;1.12317,MA0143.1;1.00455,MA0144.1;0.531867,MA0145.1;0.273764,MA0146.1;0.348055,MA0147.1;0.565108,MA0148.1;0.854239,MA0149.1;0.884158,MA0062.2;1.141,MA0035.2;0.894194,MA0039.2;0.195278,MA0138.2;1.04628,MA0002.2;0.476938,MA0137.2;0.666381,MA0104.2;1.2307,MA0047.2;0.973066,MA0112.2;0.264678,MA0065.2;0.760954,MA0150.1;0.744617,MA0151.1;0,MA0152.1;0.902317,MA0153.1;1.43021,MA0154.1;0.312019,MA0155.1;0.711948,MA0156.1;0.669101,MA0157.1;1.09377,MA0158.1;0,MA0159.1;0.565904,MA0160.1;0.871361,MA0161.1;0,MA0162.1;0.149099,MA0163.1;0.776149,MA0164.1;1.01792,MA0080.2;0.643061,MA0018.2;0.987913,MA0099.2;0.902716,MA0079.2;0.09178,MA0102.2;1.88331,MA0258.1;0.519674,MA0259.1;0.575594,MA0442.1;0}} | ||
|full_id=C4873_lymphangiectasia_Eosinophils_Mast_Neutrophils_CD4_b_H9 | |||
|id=C4873 | |||
}} |
Latest revision as of 14:21, 17 September 2013
Full id: C4873_lymphangiectasia_Eosinophils_Mast_Neutrophils_CD4_b_H9
Phase1 CAGE Peaks
Hg19::chrX:48770828..48770832,- | p@chrX:48770828..48770832 - |
Hg19::chrX:48771830..48771849,- | p2@PIM2 |
Hg19::chrX:48776292..48776309,- | p1@PIM2 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.80e-14 | 98 |
blood island | 9.80e-14 | 98 |
hemolymphoid system | 1.46e-12 | 108 |
blood | 2.05e-08 | 15 |
haemolymphatic fluid | 2.05e-08 | 15 |
organism substance | 2.05e-08 | 15 |
immune system | 1.31e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.23e-12 | 51 |
immune system cancer | 4.23e-12 | 51 |
leukemia | 1.94e-09 | 39 |
myeloid leukemia | 4.63e-08 | 31 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 0.0471418 |
MA0004.1 | 0.826076 |
MA0006.1 | 0.639288 |
MA0007.1 | 0.804807 |
MA0009.1 | 1.3275 |
MA0014.1 | 0.118426 |
MA0017.1 | 0.686276 |
MA0019.1 | 0.990656 |
MA0024.1 | 1.21731 |
MA0025.1 | 1.46617 |
MA0027.1 | 2.95767 |
MA0028.1 | 0.658629 |
MA0029.1 | 1.23771 |
MA0030.1 | 1.22561 |
MA0031.1 | 1.15713 |
MA0038.1 | 0.94098 |
MA0040.1 | 1.24388 |
MA0041.1 | 0.847069 |
MA0042.1 | 0.810843 |
MA0043.1 | 1.32783 |
MA0046.1 | 1.31611 |
MA0048.1 | 0.341392 |
MA0050.1 | 0.81185 |
MA0051.1 | 0.936307 |
MA0052.1 | 1.24796 |
MA0055.1 | 0.190716 |
MA0056.1 | 0 |
MA0057.1 | 0.333427 |
MA0058.1 | 0.716037 |
MA0059.1 | 0.714521 |
MA0060.1 | 0.492218 |
MA0061.1 | 0.456531 |
MA0063.1 | 0 |
MA0066.1 | 0.941452 |
MA0067.1 | 1.65513 |
MA0068.1 | 0.405474 |
MA0069.1 | 1.31207 |
MA0070.1 | 1.30033 |
MA0071.1 | 0.897953 |
MA0072.1 | 1.29561 |
MA0073.1 | 0.211629 |
MA0074.1 | 0.935474 |
MA0076.1 | 0.734647 |
MA0077.1 | 1.28751 |
MA0078.1 | 1.04495 |
MA0081.1 | 0.714712 |
MA0083.1 | 1.33535 |
MA0084.1 | 1.84562 |
MA0087.1 | 1.29304 |
MA0088.1 | 0.257905 |
MA0089.1 | 0 |
MA0090.1 | 0.751469 |
MA0091.1 | 0.829044 |
MA0092.1 | 0.785956 |
MA0093.1 | 0.642957 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.956299 |
MA0101.1 | 0.646932 |
MA0103.1 | 0.628063 |
MA0105.1 | 0.31555 |
MA0106.1 | 0.986396 |
MA0107.1 | 0.556367 |
MA0108.2 | 1.15387 |
MA0109.1 | 0 |
MA0111.1 | 0.767139 |
MA0113.1 | 1.00436 |
MA0114.1 | 0.549955 |
MA0115.1 | 1.57693 |
MA0116.1 | 1.3784 |
MA0117.1 | 1.36676 |
MA0119.1 | 0.695578 |
MA0122.1 | 1.39371 |
MA0124.1 | 1.53432 |
MA0125.1 | 1.44766 |
MA0130.1 | 0 |
MA0131.1 | 1.06461 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.35921 |
MA0136.1 | 0.948776 |
MA0139.1 | 0.440097 |
MA0140.1 | 0.894983 |
MA0141.1 | 0.712476 |
MA0142.1 | 1.12317 |
MA0143.1 | 1.00455 |
MA0144.1 | 0.531867 |
MA0145.1 | 0.273764 |
MA0146.1 | 0.348055 |
MA0147.1 | 0.565108 |
MA0148.1 | 0.854239 |
MA0149.1 | 0.884158 |
MA0062.2 | 1.141 |
MA0035.2 | 0.894194 |
MA0039.2 | 0.195278 |
MA0138.2 | 1.04628 |
MA0002.2 | 0.476938 |
MA0137.2 | 0.666381 |
MA0104.2 | 1.2307 |
MA0047.2 | 0.973066 |
MA0112.2 | 0.264678 |
MA0065.2 | 0.760954 |
MA0150.1 | 0.744617 |
MA0151.1 | 0 |
MA0152.1 | 0.902317 |
MA0153.1 | 1.43021 |
MA0154.1 | 0.312019 |
MA0155.1 | 0.711948 |
MA0156.1 | 0.669101 |
MA0157.1 | 1.09377 |
MA0158.1 | 0 |
MA0159.1 | 0.565904 |
MA0160.1 | 0.871361 |
MA0161.1 | 0 |
MA0162.1 | 0.149099 |
MA0163.1 | 0.776149 |
MA0164.1 | 1.01792 |
MA0080.2 | 0.643061 |
MA0018.2 | 0.987913 |
MA0099.2 | 0.902716 |
MA0079.2 | 0.09178 |
MA0102.2 | 1.88331 |
MA0258.1 | 0.519674 |
MA0259.1 | 0.575594 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
No analysis results for this cluster
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.