Coexpression cluster:C3449: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Coexpression_clusters
|full_id=C3449_Eosinophils_CD14_Neutrophils_CD34_granulocyte_Basophils_Mast
|id=C3449
}}") |
No edit summary |
||
| (7 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=-0.241068097825228,-0.116188267079837,-0.287979896129117,-0.416777540201474,-0.100442202942748,-0.0143145910062228,-0.118354964927355,-0.0990195889189253,0.253269650414555,0,0.305408613682532,0.198889811384749,0.0726020527231598,0.0703431690913273,0.234027961438882,-0.099554411784228,-0.323013237485798,-0.12454320785101,-0.123839775344714,0.089387467528136,0.173357790805803,0.143513638561947,-0.131113935798377,-0.319051694623861,-0.157295568581248,-0.525969346243937,-0.447227130623784,-0.52237467949915,0.693167700222505,0.646847708886691,0.714934375208287,0.204837924834162,0.0752902310528696,0.166010983673394,-0.417380353931807,-0.366515362624668,0.0662174173588972,0.642915350323412,0.60413174396908,0.672615829221894,0.0380776746481218,0.121853104351623,0.0330320688446342,0.619512672662728,0.561713212942151,0.592288785840647,0.525132461939011,0.422371743678085,0.47393683015318,0.956907014767983,1.00952676046261,0.906809351355362,0.376391288041361,0.515364079280615,0.371855321441455,0.618626278695002,0.421182078103327,0.422203061906355,0.640175515977486,0.292873190856802,0.61363851767519,1.0750025809717,1.07081474370077,1.1247809758367,0.372579179570392,0.174607766666174,0.351341005362286,0.93132867977132,1.07740938067351,0.850112236390295,0.334796180078131,0.241175311818996,0.231987048113211,0.30894307354026,0.406897665639046,0.380026873249938,0.400617801365649,0.457826579439665,0.40835537285624,0.330424118154027,0.203236933424054,0.23821090670904,-0.666498452600414,-0.477250026790544,-0.666498452600414,-0.234022888896019,-0.666498452600414,-0.666498452600414,-0.243293820073613,-0.375561945941827,-0.0814818503303156,0.187659032554505,-0.0190705829509911,0.627356323916305,0.865873747455313,-0.254827491356989,0.201432442864018,0.398382041625716,0.393658125459663,-0.599358198570431,-0.448529282207695,-0.498163696250825,-0.666498452600414,-0.474195256566396,-0.224389568664416,-0.299291043272291,-0.29468842993637,-0.486841754389985,-0.35676722117869,-0.368382025500399,-0.289602262495196,-0.332203098440105,-0.55370143672956,-0.666498452600414,-0.407197924738035,-0.504161895147065,-0.31435171876838,-0.0925807458532493,-0.362853474292056,-0.546396772490459,-0.448729427409481,-0.666498452600414,-0.133845730122801,-0.388681587909716,-0.174070576462782,-0.282564028678422,-0.0345970903144989,0.478411056679696,0.522198642991126,0.356185034174944,0,-0.100319912598678,-0.0334914389553806,-0.0892761529522622,0,0.0495507442533369,-0.463833040683173,0.13647927979737,0.132424819417208,-0.0304178644689793,0.130874949396158,0,0.435847741314314,0.442914786939415,-0.0385722735591948,-0.0321758824387612,-0.171325107076896,0.0371660531759481,0.208166493014751,0.278014201017533,0.0126100329121742,0,0.126390816020827,0.0241661848660146,0,-0.00812278444837433,0,-0.311341249683367,-0.333601598489221,-0.142356322345246,-0.0165460810716958,0.0828812754422249,-0.0213839530064698,0,-0.0905426616399808,-0.297376159675084,-0.271393007606456,-0.111530489000563,0.21984358692999,0,-0.000825622874386256,1.15022265696058,0.642897754592907,0.376083485589703,0,-0.139800830916385,0.0740151988666133,0.0808656449101363,0.0541586049661222,0,0,0,0,-0.0154223927480654,-0.104571403470586,0.0915167747947938,0.0309503107117237,0.0101167857969925,-0.0416461744681427,0,-0.0159573318605493,-0.0856950868381914,-0.17452801378963,0.00111520380549035,0.0528632643588366,0,0.171693634636552,0,0,0.286424080934718,0.0587358095588745,0,0.0511982733942606,0.232588648527359,0.161969692215306,-0.314427682548544,-0.0839695781775492,-0.063174496612542,0.206125491978485,0.0554067392098776,0,0.30674723083789,0.0684020414406193,0.34528589036645,0,0.162058031920036,-0.0931256997854276,0.149977702937781,0,0.155112138499558,0.158287988148605,-0.043305037260536,0.0384627524968802,-0.0308644508293181,0,0,-0.531072832931068,-0.666498452600414,-0.575751032009833,-0.431746165297237,-0.540533577761074,-0.666498452600414,0.0374115827245421,0.25340809716362,0.231499338656866,0.0997583151074656,0,-0.223297757516745,-0.0608841796249792,-0.288686526636417,-0.160551264328229,-0.0830239072041488,-0.108994040507759,-0.300001061281959,-0.291100021003931,-0.146869552808971,-0.477878056408477,0.367605332427704,0.00598419548061402,0.255210676823295,0,0.17854799992025,-0.223647305784731,-0.351657804828146,-0.112281074015144,-0.0237073235168791,0.174016352298231,0.154365287783909,0.134770456864276,0.320421625869324,0.052460372372627,0,0,-0.210909608762138,-0.0406263799396593,0.0204459973940859,0,-0.0206269169676571,0.334059627285332,0.366978335360564,0.0955936734149088,-0.259777076834391,0.00715268786186929,-0.136812068937658,-0.0462749472956151,-0.0471502518338877,0.0193342970865351,0.150909640440754,0.209575304559661,-0.069244428168816,-0.0197136432097371,0.515954507869761,0.737586951440639,0.412302781001337,-0.253626929947945,0.136127379325401,-0.142186867854151,0.176509886007529,-0.152884876955074,-0.319728789304815,-0.232735241791526,0.122943339248088,0.076627378732451,0,-0.133185807245842,0.351319987368659,-0.169465683732873,-0.0199469224034812,0.0461762855885978,-0.0551235722245761,-0.0825086182619008,-0.102516699578434,0.0450018635152492,0.216365224380118,-0.177672116154378,-0.246760579485838,0,-0.138114588491343,0,0,0.178499034797688,0.410729156822079,0.539153466134671,0,-0.0557404368641891,0,0.108462953440301,-0.143837574398239,0.121451164621767,0,0,0.516462587963993,0.500179668314988,0.535886771093468,-0.117379119144314,0.208967540534792,0.0207132832514982,-0.132756832963057,0,0.70401853616453,0.849052339332482,0.792378598855572,0.349258960972376,0.111776207506207,0.187985127977716,0.063264545739412,0.182711172658963,0.0133705976106537,0.114328539083144,0,0,0.0443736452691554,0,0.110055100688609,0,0.387477748660147,0.263334712436431,0.260031715852576,0.3914188474507,0.456492535841144,-0.0516798597020668,0,0.309710631317868,-0.191574128234405,-0.0569852047233855,-0.337158600277659,-0.271748339219546,-0.182650372536508,-0.164853108165485,0,-0.0894924048312145,-0.0272074418786045,0,-0.229836675238916,-0.0441413495439293,-0.103146975862405,0.0333504907547475,0,-0.130215174316824,0,0,-0.00283550342428374,-0.159435519275466,0.239790674554759,0.332403250618451,0,-0.0733310184592345,-0.0578635079980687,-0.0289699696874023,0,0,0.0750634406428934,0.0604647139915523,-0.123271516678575,0.106207830845621,-0.393025039163534,-0.535303583497585,0,0.0810846339604272,-0.0571806315690223,-0.0887646051329128,-0.395988668491848,-0.333024375829445,0.316404900407839,0.308969347938646,0,0,0.117662510213418,0.0938195098416414,0.08655618323716,0.055917095449584,0.15858318597345,0,0,-0.168366630571618,0.0675306044771823,0.295738898098429,0.0450952884844407,0,0.232548581494769,-0.139539609956017,0.128447408775417,0.0543591510342787,-0.0152464225688895,0,-0.13109843431652,0,0.0167781230998371,0,0.120107884302045,0.350162568133937,0.140322664705206,0,-0.0908360294843226,-0.126064701127173,0,0.0184785368433122,0.147753814574638,0,0.0237924450745353,0,0,0.00425726790393477,0,0,0,0,-0.0640206195068462,0,0.160494658116318,0,0.0853464418566224,0,-0.0566004506612408,0,0,-0.0275604350695345,0.186110921001222,0.194234909383026,0.374901117150668,0.301076361760645,0.0276772072835906,0.137123759458673,0,0,0.0581913339586291,0.170710263440157,0.134298457230415,-0.0481316996588544,0.178242227335072,0,0.0268875964044025,0,0.14963850419244,0.0254892476627445,0.318076462667272,0,-0.233659768098213,-0.373693245166749,0.303446833821793,-0.666498452600414,-0.430630261552389,-0.245509817579981,-0.602255315292697,-0.0439456314682032,0.0505991146886595,0.397348066616065,0.125469315867231,0.193568230737617,0.0963996975781486,-0.0854812568008451,0.112570327535892,0.00784996508718883,0.39186017816059,0.15463186787372,0.26756886175468,-0.0195995946469881,0,-0.00574509713713389,0.0670147110949639,0.0775089264793031,0,-0.318023412670814,-0.478720796551625,-0.541644856479407,-0.666498452600414,-0.0451778607796854,0.0480570630120393,-0.298217940017835,-0.557866400735332,-0.0220959315878301,0.232423545763124,0,0.425693770672691,0.234010701176811,0.20686825959025,0.0611273368993566,0.0662528064680222,-0.513522260910916,0.432801038582512,0.0891345452604259,-0.568917452815665,0.0224736698177986,-0.251507988587187,0,0.17991162519606,0.14972006555813,0.456625605720763,0.168961037073701,0.096154746308861,0.0695376832771228,0,0.128984104925001,-0.241404862169776,0.252159652448591,0.101408777172707,0,0,0.340101554631973,0.136101185086405,-0.179577952453125,-0.275912498465176,-0.153664035403711,0,0.121462694690976,0.0284691763110776,0.0336456417993217,0,0.0280134857298289,-0.211355954527319,0.178302987355776,0.240108517124528,0.0111165146908568,0,0,0,0.150091054709497,-0.280159959757985,0.261060437612719,-0.36073169602815,0.0900926031929812,-0.123278080858305,-0.0974585364455653,0,0,-0.299463967078066,-0.341690211605436,-0.118480613530313,0.366682693310083,-0.168429423026209,-0.581426097129932,-0.065984497753147,0.128068084832327,0.146366213855147,-0.222590094682098,-0.192716259275236,-0.275226757727057,0.0236478152618772,0,-0.25946244528752,-0.593713907985084,0.0935151200657859,0.0312150007695028,-0.0910691770359247,-0.000943587436319726,-0.263315485371568,0.520133088081716,0.060819961675157,-0.335968996708224,0.0857480428332966,0.175976934157493,0.144084663710352,0.0953465156479363,0.177157849928309,-0.229399021899894,-0.2294462729498,0.303353109752373,0.201789716314967,0,-0.207982528857563,-0.126602623280283,-0.0639550951745104,-0.106867730980289,0.133921743952029,0,0,0.0180932473903528,0.0636150322931587,0,0.0662465138760421,0,0.198876746661643,-0.0647486426693986,0.253181291300758,-0.270477787259136,0,-0.254104645841662,0.354282144201419,0.214282736061426,-0.164827595194885,-0.0959935730452274,0,0,-0.00350260476107667,0.0128940701861542,0.797457950312194,0.0914605681757807,-0.354416470014102,0,0,0,0,-0.232424128640418,-0.12676523407859,-0.115906673215751,-0.0221962578124527,0,-0.160544538394036,-0.0251185294017439,0,-0.0332405083848737,-0.380624729602718,0,0,-0.495574226121862,-0.516473621497975,-0.666498452600414,0,0.521321948041652,0.104835953290454,0.037609837150671,-0.161593201202013,0,0.11660552869023,-0.0565566016449316,0,-0.0800482867547926,-0.191368521572134,0.0983905284693096,-0.0887612586700851,0,0,0,0.087794345124746,-0.0952313180618996,0.322297912495061,-0.056094161421672,0,-0.00186373620341473,0,0.1330965308975,0.000442844749567572,0.0767014137429127,0.300411659730571,0.0446666046882722,-0.191602992600279,-0.244316770821026,-0.494137721652415,0.250443250558414,0.0526026050661492,0.388646581803179,0.339537762452719,0.0542148538179282,0,0,-0.0722572843602927,0.127699591397294,-0.148822748458987,0,0,-0.515727923777748,-0.0255729093372622,0,-0.397827828483708,-0.10960586696253,-0.499673329475833,-0.607722920528296,-0.0037094840509353,0,0,0.0623639370560316,0.113916657338273,0.135513209625164,0.0426969620433478,0.130175436974942,0.062037257963736,-0.08929035462899,0.00224385353052403,0.107860403626556,-0.0294068018188183,-0.123892437469878,-0.0200728163741491,0,0.0975463615722778,0.160358553927687,-0.013069456341589,0,0.192628570218833,0.0676742739429795,-0.0448271589293825,-0.00371702974220556,0,0.00599142181465517,-0.312034847744442,0,0.233095749248247,0.209999815813253,0,-0.288257790001545,0.00291611627363997,-0.173000718973691,0.00611815731555154,0,0.0065659799832748,0,0,0,-0.0527757266284546,0,0,-0.2928469090142,-0.445260524132995,-0.303164217800623,-0.245215554377695,0.347995646842052,0,-0.24086366409016,-0.155882898918084,-0.179844188253317,0.256626735322433,0,-0.0141161688680229,0.0584888322395474,0,-0.479224826211455,-0.120418081266135,-0.323818031306621,-0.235565126734854,-0.666498452600414,-0.067220503259662,-0.473751264755492,0,-0.666498452600414,-0.134800879289929,0.0805081823082479,0,0.0790789172262835,-0.0828541004286565,0.0446380607116337,-0.0786047072213294,-0.171335559423748,0.144957999923379,0.0626535699481909,0,-0.0195881671658087,0,0.312297615987758,0.25745202221668,-0.00236414579844035,0,-0.325361341963118,0.223875762580636,0,0,0,0.0405858882898475,0.112390184617091,0.00259512518440463,-0.102615118731873,0,0,-0.477015210907159,0,0.0574334423213926,-0.285027783394176,-0.0572992215899829,0.0565970479664611,-0.0615649787541998,-0.372802549753723,-0.0688462060928563,0,-0.468895412631591,0.0567273056418711,-0.0581181370755012,0.117963288022526,0.0637322994519343,-0.0763237855007585,0.00770979851077103,0.195908663680553,0.185492529900181,0.0275604252086442,0.102505225417881,0.0437745508757565,0,-0.602784788316363,-0.266627780882324,-0.394821453610395,0.203536023418225,0.364471848769872,0.445781155127342,0.504501910205125,0,0.0485707522809905,-0.0491917044673909,0,0.0431041958591414,0.151972566168985,-0.130635536585959,0.476632621324433,0.0345649724841995,0,-0.0908934291819011,0.069716230573999,0,0.20036069272285,-0.0124093608269319,-0.190898768743331,-0.515314788682521,-0.294442450809048,-0.542705086029809,0,0.296366026014942,0,-0.206914618029596,0.252149647913844,0,-0.0292846036056899,0,-0.0689579191554504,0,-0.301802119224484,-0.075366484061494,-0.541960606881172,0,0,0,0.252755618044007,-0.148821478100061,-0.0567704238005509,-0.602875574612896,0.146734732312814,-0.445498141378647,0,0.168293326588083,0.00535955580474534,0.0599243683386697,-0.614895877318933,-0.509022860050489,-0.134091709522911,-0.0472325114870368,0,-0.173238048568221,-0.0635175970173116,0.0317229404497622,-0.410287826057257,0.109840666264921,-0.00184192041719866,0.0372331772697503,0,-0.401761872003291,-0.200474130890157,0,-0.032056226635493,0,0,-0.00981785525668277,0.0474813232526902,0,0,-0.0720486995744558,0.0552374802117013,0,0.0356861218482345,0.0373606922324137,0.162906230848994,0.0516140260723845,0,0,-0.373864648004178|full_id=C3449_Eosinophils_CD14_Neutrophils_CD34_granulocyte_Basophils_Mast|id=C3449|ontology_enrichment_celltype=CL:0000766!2.42e-25!72;CL:0000860!1.41e-24!42;CL:0002057!1.41e-24!42;CL:0000473!9.60e-24!48;CL:0000234!9.60e-24!48;CL:0000557!3.08e-21!67;CL:0002009!4.40e-20!61;CL:0002194!8.11e-20!59;CL:0000576!8.11e-20!59;CL:0000040!8.11e-20!59;CL:0000559!8.11e-20!59;CL:0000839!2.57e-18!66;CL:0000763!4.50e-17!108;CL:0000049!4.50e-17!108;CL:0000325!2.73e-10!87;CL:0000094!8.96e-07!8|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0002371!2.53e-19!76;UBERON:0004765!1.18e-16!90;UBERON:0001474!1.28e-16!82;UBERON:0001434!5.15e-16!100;UBERON:0002390!4.96e-15!98;UBERON:0003061!4.96e-15!98;UBERON:0002193!4.22e-13!108;UBERON:0002405!1.12e-12!93;UBERON:0002204!1.17e-12!167;UBERON:0000467!1.20e-09!624;UBERON:0000480!1.98e-09!625;UBERON:0000062!1.04e-08!503;UBERON:0003081!6.64e-08!203;UBERON:0000468!5.28e-07!656;UBERON:0000926!8.25e-07!315;UBERON:0004120!8.25e-07!315;UBERON:0006603!8.25e-07!315|tf_chipseq_enrich=ELF1#1997;3:4.25809795880754:0.0129517987505461:0.0461096574075635!ELK4#2005;2:10.823787772312:0.0109128471951648:0.0401849957060791!ESR1#2099;2:20.5124021974363:0.00309974157709518:0.0163057273380801!FOSL1#8061;2:26.4757198109153:0.00186983370259098:0.0110236275509398!FOSL2#2355;2:11.2868004030411:0.010053458697312:0.0376658477862162!GATA3#2625;2:18.1576775714707:0.00394454681927962:0.018943510611061!HNF4G#3174;2:19.1689483509645:0.00354398661128422:0.0179701130114052!JUNB#3726;2:20.4070884398808:0.00313146219943874:0.016446081698038!MAX#4149;3:6.45255550900712:0.00372191383426551:0.0186156294687446!MEF2A#4205;2:12.495487273096:0.00823502947802974:0.0324819942463913!MYC#4609;3:5.2222818716094:0.00702084375574015:0.0293875957278564!NFKB1#4790;3:5.48806342419384:0.00604938181565543:0.0269110783935442!NR3C1#2908;3:14.973023331173:0.000297833119467548:0.00308309972882063!PAX5#5079;3:6.66956553117783:0.00337029099967726:0.0172620186217102!RAD21#5885;3:10.3550338954563:0.000900491207356542:0.00662905485339465!RXRA#6256;2:13.3830780927555:0.00719643442946573:0.0298213869530997!SIN3A#25942;3:5.40888472681514:0.00631896197799152:0.027596640880633!SMARCB1#6598;2:12.1684771874383:0.00867500222192174:0.032975743659883!SMC3#9126;3:15.0449328449328:0.000293582542037187:0.00308496499726549!SRF#6722;3:13.7971782621678:0.000380661502580019:0.00374455181953043!TFAP2C#7022;3:10.8092286098602:0.000791674657575313:0.0061418592751826!USF1#7391;3:6.36149927720796:0.0038840405729056:0.018990885458506!ZNF263#10127;3:8.22184163701068:0.00179904392556587:0.0109143391543523|tfbs_overrepresentation=0.147255,3.52041e-05,0.00948065,0.0477154,0.199763,0.287811,0.0430074,0.0022397,0.000541236,0.0257057,0.139423,0.225367,0.0190579,0.125978,0.148679,0.0619003,0.010441,0.0982016,0.00142191,0.108057,0.0190294,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.209392,0.0907212,2.13529e-05,0.0933697,0.0226057,0.114046,0.0180314,0.00178278,0.0665252,0.0844722,0.324808,0.0429682,0.000319308,0.00227592,0.00481151,0.0246116,0.140039,0.0180778,0.00762432,0.0362416,0.0380166,0.18151,0.111283,0.121201,0.154071,0.0541794,0.0701653,0.00446469,0.198787,0.0384161,0.107455,0.212709,0.0783235,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.00989266,0.0600088,0.0860723,0.167053,0.00146949,0.067678,0.089036,0.119383,0.00747605,0.000147351,0.0964936,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.291327,0.000234347,0.064341,0.0235519,0.0154619,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.000303831,0.153631,0.0927458,0.0415725,0.0574857,0.276221,0.141874,0.0370665,0.219088,0.00084924,0.00229559,0.338096,0.0109386,0.269326,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.139021,0.0838393,0.01474,0.00196532,0.140123,0.0857827,0.102368,0.176912,0.00424238,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.00215071,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,0.013844,0.0693171,0.0988228,0.00365114,0.0389418,0.120833,0.200647,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.0115024,0.273479,0.00679439,0.0400322,0.00847953,0.0403542,0.000606163,0.179689,0.137725,0.0255071,0.0541353,0.0799324,0.090079,0.140334,0.181817,0.178449,0.0356339,0.0133424,0.122474,0.0274061,0.115574,0.0737247,0.00735999,0.183031,0.0401756,0.0828697,0.0160177,0.00595679,0.187297,0.122935,0.228812,0.112671,0.0470731,8.4835e-05,0.0602859,0.0676496,0.00624688,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.27358,0.0121616,0.206299,0.178359,0.0458667,0.104357,0.121154,0.1129,0.0549274,0.169057,0.164202,0.100942,0.062995,0.10299,0.0105855,0.37245,0.15606,0.161026,0.0738599,0.126611,0.0101199,0.085973,0.060453,0.059896,0.569726,0.0133328,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.0381183,0.014161,0.214803,0.182472,8.50675e-05,0.0983991,0.0830921,0.116283,0.136838,0.0034161,0.111647,0.0119747,0.117027,0.00076121,0.0183114,0.185743,0.0980288,0.0980899,0.0134864,0.107242,0.00161471,0.0695832,0.0121776,0.0619218,0.1751,0.0141386,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.00726302,0.0755168,0.000364005,0.063292,0.254773,0.446759,0.00386209,0.0380459,0.130174,0.219944,0.0381789,0.00102762,0.0821962,0.20128,8.37562e-05,0.0263372,0.00083951,0.000572844,0.0376513,0.0222487,0.373681,0.00641099,0.147559,0.330703,0.0914012,0.329568,0.178727,0.0164332,0.271958,0.00531795,0.00202409,0.00183273,0.0121013,0.000362379,0.187251,0.362792,0.181715,0.00249167,0.109988,0.0620388,0.218329,0.00257817,0.376924,0.129235,0.00436109,0.00734087,0.168255,0.0792797,0.0173702,0.000615629,0.000241502,0.276829,0.0509673,0.141124,3.07218e-06,0.00223433,0.00078363,0.0669244,0.283727,0.314747,0.0567394,0.000448164,0.448095,0.000269721,0.416816,0.000455917,0.137839,0.0210941,0.0120909,0.056723,0.00280546,0.18237,0.346458,0.0964442,0.0512465,0.275351,0.0304678,0.185661,0.000971103,0.0427964,0.270984,0.000544819,0.155555,0.00637776,0.169228,0.248634,0.281576,0.00419907,0.0141151,0.0670502,0.0730934,0.0182356,0.00243366,0.00012837,0.0583074,0.0169683,0.671377,0.546839,0.551561,0.000377804,0.0258593,0.0550136,0.032738,0.0451077,0.0747529,0.229003,0.0897888,0.00223439,0.000772974,0.0484563,0.0671437,0.000560159,0.0465597,0.327108,0.0295492,0.278044,0.0015747,0.00262586,0.228096,0.336314,0.19763,0.000720848,0.00172609,0.00242214,0.0293525,0.420626,0.0374607,0.311758,0.335105,0.144809,0.145539,0.08628,0.376191,0.119597,0.127215,0.0348837,0.152681,0.00110167,0.137098,0.259235,0.134788,0.0985856,0.0460163,0.048108,0.284593,0.343734,0.306556,0.305777,0.00257275,0.00573447,0.169823,0.284629,0.0379506,0.359455,0.226257,0.016014,0.0175765,0.363685,0.464871,0.000624133,0.206222,0.000126198,0.0224921,0.113671,0.040018,0.00872205,0.000188895,0.0439467,0.141758,4.166e-05,0.168058,0.159617,0.0310416,0.0799758,0.232251,0.189515,0.0891382,0.0595618,0.171389,0.0033863,0.00943126,0.0439245,0.0699395,0.136757,0.0158269,0.000670954,0.262389,0.316179,0.0697683,0.0556835,0.192544,0.0779981,0.0575676,0.144322,0.000139175,0.203656,0.442884,0.441735,0.0196924,0.000255104,0.000432194,0.0435386,0.303336,0.00835866,1.63421e-05,0.10689,0.273326,0.0627924,0.0842821,0.0179103,0.303939,0.0434097,0.0886747,0.0464827,0.0152726,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.210369,7.53678e-05,0.00934729,0.0499762,0.0828956,0.0666953,0.0177068,0.111277,0.219383,0.00817962,0.19559,0.132201,0.00130383,0.0481795,0.199971,0.0966069,0.127758,0.0164446,0.184486,0.169234,0.0876426,0.0952322,0.0112557,0.00013661,0.107043,0.275244,0.00481323,0.173708,0.000523704,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.00179985,0.153187,0.0797897,0.0974211,0.0135691,0.123526,0.0906475,0.0558058,0.0443426,0.166024,0.137332,0.0145999,0.0656973,0.211746,0.220538,0.0801488,0.0757897,0.013859,0.193215,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,0.000246135,0.170307,0.201033,0.0488949,0.174921,0.370421,0.0330727,0.0694567,0.02609,0.0394698,0.0596469,0.419264,0.122476,0.108872,0.00628729,0.26144,0.0286025,0.00896808,0.0109933,0.038848,0.000119282,0.0550279,0.144067,0.253693,0.217069,0.190048,0.131088,0.394069,0.237101,0.286988,0.00297388,0.172491,0.0818785,5.87745e-05,0.00836526,0.147698,0.141463,0.167267,0.140622,0.0889592,0.309588,0.0458479,0.0473033,0.094881,0.445524,0.00924871,0.0774373,0.109194,0.128564,0.131452,0.00128046,0.448776,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.144075,0.0340203,0.0741807,0.277091,0.153605,0.000821167,0.0255266,0.0465945,0.00740669,0.192475,0.177967,0.188967,0.057571,0.047591,0.392974,0.0608699,0.175319,0.00583965,0.0713214,0.00224624,0.291114,0.0355833,0.125606,0.175094,0.0370461,0.00739585,0.206454,0.00206897,0.108277,0.0673484,0.108748,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,0.0277579,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.0158019,0.104948,0.0266106,0.057168,0.00259914,0.0759837,0.0457643,0.152372,0.194941,0.0257725,0.000189228,0.000748789,0.172982,0.0661495,0.151597,0.0626744,0.0195983,0.148574,0.15663,0.155821,0.0718905,0.0919008,0.00185183,0.144304,0.15063,0.0973823,0.15503,0.170295,3.21924e-06,0.137219,0.228144,0.251466,0.0461822,0.11903,0.0838874,0.331451,0.113145,0.112651,0.0186145,0.174776,0.0948451,0.264079,0.0339656,0.140533,0.0997756,0.257598,0.00556936,0.113069,0.025556,0.16791,0.09066,0.220462,0.166967,0.188651,0.0813902,0.184948,0.0128995,0.0546539,0.511859,0.0590944,0.0334734,0.178389,0.0257622,0.231073,0.0972686,0.0743925,0.0360851,0.412187,0.131093,0.0434602,0.133616,0.103051,0.36927,0.449036,0.0973145,0.231447,0.18653,0.115047,0.37006,0.42622,9.02692e-10,0.197484,0.0919774,0.36145,0.406019,0.0129,0.057779,0.0863135,0.00272579,0.0411943,0.0140037,0.0305485,0.50058,0.443185,0.00100396,0.3468,0.0184337,0.0279976,0.000951286,0.0734371,0.38649,0.284625,0.00583062,1.85878e-07,0.0437169,0.0465139,0.164197,0.128922,0.287881,0.0113427,0.000566617,0.336276,0.468444,0.258219,0.446557,0.243383,0.0186777,0.0889613,0.000456298,0.00650842,0.161598,0.00310283,0.021206,7.75114e-06,0.00136122,0.37357,0.0203982,0.477353,0.00104348,0.000558506,0.185744,0.20342,0.200493,0.20558,0.300504,0.25656,0.425963,0.349197,1.17258e-05,0.156104,0.141318,0.0168417,0.00477789,0.314438,0.354789,0.163828,0.230581,0.120226,0.0448825,0.0513026,0.314429,0.181415,0.282286,0.0192486,0.616388,0.408413,0.165147,0.322213,0.00480191,0.0655189,6.70755e-06,0.0871388,0.522605,0.481611,0.00120002,0.222037,0.416621,0.416292,0.0252635,0.0115406,0.000280804,0.204817,0.0233392,0.138871,0.308032,0.0147755,0.19783,0.0833851,0.000645205,0.48065,0.175199,0.332919,0.0120568,0.00701509,0.0164118,0.0768488,0.00780726,0.0140668,0.363192,0.236011,0.203486,0.0413386,0.0123025,0.00319628,0.0704514,0.275347,0.019895,0.305885,0.241132,0.0795725,0.30666,0.303709,0.0323359,0.386538,0.035296,0.250964,0.00154968,0.457886,0.00582796,0.220231,0.159791,0.196976,0.191517,0.00383709,0.00258603,0.307334,0.459728,0.283463,0.0517073,0.472935,0.399569,0.0413011,0.0114705,0.0418805,0.0133102,0.47795,0.359231,0.339729,0.197805,0.0690807,0.0870376,0.332774,0.00107377,0.299887,0.000613177,0.205413,0.17639,0.0779009,0.0424553,0.022685,0.0337138,0.18966,0.000264338,0.188263,0.00265057,0.00386277,0.00081525,0.19104,0.163057,0.219428,0.208013,0.0900729,0.0953646,0.166124,0.0348699,0.0828367,0.0358457,0.0232009,0.119514,0.179412,0.0200828,0.220904,0.0269454,0.341681,0.310674,0.21801,0.0211771,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.00803363,0.179889,0.0279371,0.27872,0.0855609,0.131118,0.20837,0.0335483,0.222339,0.0673329,0.0234202,0.00030063,0.113092,0.145701,0.0285999,0.162145,0.0284767,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.0218443,0.350452,0.154941,0.00753169,0.0986735,0.108462,0.0595618,0.21593,0.158479,0.220319,0.0204324,0.00805527,0.259632,0.000570717,0.0173907,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.185335,1.24679e-06,0.258496,0.0377094,0.203781,0.21382,0.0232077,0.010576,0.0199603,0.0339803,0.115972,0.224568,0.246105,0.173026,0.200432,0.139785,0.197112,0.240478,3.04938e-05,0.13108,0.256963,0.222798,0.172134,0.176789,0.0969345,0.202137,0.310405,0.280943,0.218161,0.0822373,0.00161996,0.00591081,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.00717361,0.0377035,0.211332,0.187731,0.000168983,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.204393,0.0488311,0.286691,0.347036,0.141729,0.0381402,0.0359756,0.200105,0.227491,2.0313e-06,0.253509,5.21888e-05,0.00482769,0.0385243,0.00908908,0.160658,0.206239,0.19924,2.78165e-05,0.236464,0.325148,0.115817,0.0257187,0.223831,0.00691586,0.00144649,0.0195259,0.0440463,0.283218,0.249955,0.164638,0.0272695,0.0935776,0.327622,0.0276507,0.207791,0.0958756,0.0859274,0.000648999,0.171683,0.158847,0.271275,0.00259055,0.0404514,0.101021,0.0268373,0.175934,0.157274,0.000119654,0.252796,0.0228361,0.361435|tfbs_overrepresentation_for_novel_motifs=0.699513,0.442617,0.690871,0.855819,0.641468,0.853988,0.937929,0.494933,0.491742,0.63186,0.820209,0.985163,0.436625,0.925331,0.639839,0.667627,1.17594,0.575162,0.452865,0.305559,0.69094,0.680949,0.845342,0.635379,0.743951,1.00973,1.05396,0.842925,0.645155,0.388328,0.795576,1.21459,0.534793,1.11965,1.46099,0.843849,1.45286,0.855276,0.567465,1.18324,0.598234,0.777097,0.718382,0.63803,0.151453,0.726632,0.939121,0.808003,0.247669,0.645308,1.02504,0.951993,0.893117,1.29475,1.45259,0.928548,0.650353,0.892517,0.388177,0.891404,2.8077,0.941709,0.492369,1.14672,0.961293,1.11026,1.54311,1.91674,1.2037,1.75271,0.762094,0.502203,2.41357,1.45054,1.92922,1.06461,0.396746,1.12884,1.20029,0.73687,0.459024,1.14559,0.960908,0.498519,1.39759,0.977977,0.303648,0.993996,1.053,2.0169,1.63834,1.36973,1.23218,0.543775,0.642354,0.560075,0.450952,1.27663,1.05794,0.360456,0.569121,1.22626,1.27082,1.1798,1.09802,0.815119,1.16312,0.921547,0.743661,0.622396,0.703975,1.26794,0.684398,0.830777,1.58942,0.594137,1.66424,0.794219,2.50498,0.547323,1.44203,1.0504,0.850918,0.973172,1.70203,1.12965,0.930979,1.2374,1.48578,0.561252,1.37044,0.798812,1.50051,0.969553,1.65144,1.73097,0.788803,0.843556,1.60823,2.47382,2.06967,1.57016,0.932872,1.27296,1.09989,0.883164,1.08214,2.31409,0.773313,0.539692,0.318511,1.29196,1.37083,0.481626,0.941179,1.78371,1.03563,0.624795,0.744018,0.710709,1.56892,1.35169,1.19946,0.714443,1.11698,0.960047,0.524529,0.936473,1.96295|tfbs_overrepresentation_jaspar=MA0003.1;1.54338,MA0004.1;0.826076,MA0006.1;0.639288,MA0007.1;0.804807,MA0009.1;1.3275,MA0014.1;0.118426,MA0017.1;0.686276,MA0019.1;3.71555,MA0024.1;1.21731,MA0025.1;1.46617,MA0027.1;2.95767,MA0028.1;0.658629,MA0029.1;1.23771,MA0030.1;1.22561,MA0031.1;1.15713,MA0038.1;0.94098,MA0040.1;1.24388,MA0041.1;0.847069,MA0042.1;0.810843,MA0043.1;1.32783,MA0046.1;1.31611,MA0048.1;0.341392,MA0050.1;0.81185,MA0051.1;0.936307,MA0052.1;1.24796,MA0055.1;1.06172,MA0056.1;0,MA0057.1;0.333427,MA0058.1;1.70328,MA0059.1;0.714521,MA0060.1;0.492218,MA0061.1;0.456531,MA0063.1;0,MA0066.1;0.941452,MA0067.1;1.65513,MA0068.1;0.405474,MA0069.1;1.31207,MA0070.1;1.30033,MA0071.1;0.897953,MA0072.1;1.29561,MA0073.1;0.407479,MA0074.1;0.935474,MA0076.1;0.734647,MA0077.1;1.28751,MA0078.1;1.04495,MA0081.1;0.714712,MA0083.1;2.96495,MA0084.1;1.84562,MA0087.1;1.29304,MA0088.1;0.257905,MA0089.1;0,MA0090.1;0.751469,MA0091.1;0.829044,MA0092.1;0.785956,MA0093.1;1.55117,MA0095.1;0,MA0098.1;0,MA0100.1;0.956299,MA0101.1;0.646932,MA0103.1;0.628063,MA0105.1;0.31555,MA0106.1;0.986396,MA0107.1;0.556367,MA0108.2;1.15387,MA0109.1;0,MA0111.1;0.767139,MA0113.1;1.00436,MA0114.1;0.549955,MA0115.1;1.57693,MA0116.1;0.560723,MA0117.1;1.36676,MA0119.1;0.695578,MA0122.1;1.39371,MA0124.1;1.53432,MA0125.1;1.44766,MA0130.1;0,MA0131.1;1.06461,MA0132.1;0,MA0133.1;0,MA0135.1;1.35921,MA0136.1;0.948776,MA0139.1;0.440097,MA0140.1;0.894983,MA0141.1;0.712476,MA0142.1;1.12317,MA0143.1;1.00455,MA0144.1;0.531867,MA0145.1;2.11725,MA0146.1;1.70974,MA0147.1;1.38767,MA0148.1;0.854239,MA0149.1;0.884158,MA0062.2;1.141,MA0035.2;0.894194,MA0039.2;0.0526989,MA0138.2;1.04628,MA0002.2;0.476938,MA0137.2;0.666381,MA0104.2;1.2307,MA0047.2;0.973066,MA0112.2;0.731309,MA0065.2;0.277623,MA0150.1;0.744617,MA0151.1;0,MA0152.1;0.902317,MA0153.1;1.43021,MA0154.1;0.312019,MA0155.1;1.31345,MA0156.1;1.60572,MA0157.1;1.09377,MA0158.1;0,MA0159.1;0.565904,MA0160.1;0.871361,MA0161.1;0,MA0162.1;0.149099,MA0163.1;0.122425,MA0164.1;1.01792,MA0080.2;1.55139,MA0018.2;0.987913,MA0099.2;0.902716,MA0079.2;0.941469,MA0102.2;1.88331,MA0258.1;0.519674,MA0259.1;0.575594,MA0442.1;0}} | ||
|full_id=C3449_Eosinophils_CD14_Neutrophils_CD34_granulocyte_Basophils_Mast | |||
|id=C3449 | |||
}} | |||
Latest revision as of 12:26, 17 September 2013
Full id: C3449_Eosinophils_CD14_Neutrophils_CD34_granulocyte_Basophils_Mast
Phase1 CAGE Peaks
| Hg19::chr14:74225423..74225445,+ | p1@MIR4505 |
| Hg19::chr14:74226747..74226779,- | p3@C14orf43 |
| Hg19::chr14:74226783..74226819,- | p4@C14orf43 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukocyte | 2.42e-25 | 72 |
| classical monocyte | 1.41e-24 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.41e-24 | 42 |
| defensive cell | 9.60e-24 | 48 |
| phagocyte | 9.60e-24 | 48 |
| granulocyte monocyte progenitor cell | 3.08e-21 | 67 |
| macrophage dendritic cell progenitor | 4.40e-20 | 61 |
| monopoietic cell | 8.11e-20 | 59 |
| monocyte | 8.11e-20 | 59 |
| monoblast | 8.11e-20 | 59 |
| promonocyte | 8.11e-20 | 59 |
| myeloid lineage restricted progenitor cell | 2.57e-18 | 66 |
| myeloid cell | 4.50e-17 | 108 |
| common myeloid progenitor | 4.50e-17 | 108 |
| stuff accumulating cell | 2.73e-10 | 87 |
| granulocyte | 8.96e-07 | 8 |
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 2.53e-19 | 76 |
| skeletal element | 1.18e-16 | 90 |
| bone element | 1.28e-16 | 82 |
| skeletal system | 5.15e-16 | 100 |
| hematopoietic system | 4.96e-15 | 98 |
| blood island | 4.96e-15 | 98 |
| hemolymphoid system | 4.22e-13 | 108 |
| immune system | 1.12e-12 | 93 |
| musculoskeletal system | 1.17e-12 | 167 |
| anatomical system | 1.20e-09 | 624 |
| anatomical group | 1.98e-09 | 625 |
| organ | 1.04e-08 | 503 |
| lateral plate mesoderm | 6.64e-08 | 203 |
| multi-cellular organism | 5.28e-07 | 656 |
| mesoderm | 8.25e-07 | 315 |
| mesoderm-derived structure | 8.25e-07 | 315 |
| presumptive mesoderm | 8.25e-07 | 315 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
| Motifs | -log10(p-value) |
|---|---|
| MA0003.1 | 1.54338 |
| MA0004.1 | 0.826076 |
| MA0006.1 | 0.639288 |
| MA0007.1 | 0.804807 |
| MA0009.1 | 1.3275 |
| MA0014.1 | 0.118426 |
| MA0017.1 | 0.686276 |
| MA0019.1 | 3.71555 |
| MA0024.1 | 1.21731 |
| MA0025.1 | 1.46617 |
| MA0027.1 | 2.95767 |
| MA0028.1 | 0.658629 |
| MA0029.1 | 1.23771 |
| MA0030.1 | 1.22561 |
| MA0031.1 | 1.15713 |
| MA0038.1 | 0.94098 |
| MA0040.1 | 1.24388 |
| MA0041.1 | 0.847069 |
| MA0042.1 | 0.810843 |
| MA0043.1 | 1.32783 |
| MA0046.1 | 1.31611 |
| MA0048.1 | 0.341392 |
| MA0050.1 | 0.81185 |
| MA0051.1 | 0.936307 |
| MA0052.1 | 1.24796 |
| MA0055.1 | 1.06172 |
| MA0056.1 | 0 |
| MA0057.1 | 0.333427 |
| MA0058.1 | 1.70328 |
| MA0059.1 | 0.714521 |
| MA0060.1 | 0.492218 |
| MA0061.1 | 0.456531 |
| MA0063.1 | 0 |
| MA0066.1 | 0.941452 |
| MA0067.1 | 1.65513 |
| MA0068.1 | 0.405474 |
| MA0069.1 | 1.31207 |
| MA0070.1 | 1.30033 |
| MA0071.1 | 0.897953 |
| MA0072.1 | 1.29561 |
| MA0073.1 | 0.407479 |
| MA0074.1 | 0.935474 |
| MA0076.1 | 0.734647 |
| MA0077.1 | 1.28751 |
| MA0078.1 | 1.04495 |
| MA0081.1 | 0.714712 |
| MA0083.1 | 2.96495 |
| MA0084.1 | 1.84562 |
| MA0087.1 | 1.29304 |
| MA0088.1 | 0.257905 |
| MA0089.1 | 0 |
| MA0090.1 | 0.751469 |
| MA0091.1 | 0.829044 |
| MA0092.1 | 0.785956 |
| MA0093.1 | 1.55117 |
| MA0095.1 | 0 |
| MA0098.1 | 0 |
| MA0100.1 | 0.956299 |
| MA0101.1 | 0.646932 |
| MA0103.1 | 0.628063 |
| MA0105.1 | 0.31555 |
| MA0106.1 | 0.986396 |
| MA0107.1 | 0.556367 |
| MA0108.2 | 1.15387 |
| MA0109.1 | 0 |
| MA0111.1 | 0.767139 |
| MA0113.1 | 1.00436 |
| MA0114.1 | 0.549955 |
| MA0115.1 | 1.57693 |
| MA0116.1 | 0.560723 |
| MA0117.1 | 1.36676 |
| MA0119.1 | 0.695578 |
| MA0122.1 | 1.39371 |
| MA0124.1 | 1.53432 |
| MA0125.1 | 1.44766 |
| MA0130.1 | 0 |
| MA0131.1 | 1.06461 |
| MA0132.1 | 0 |
| MA0133.1 | 0 |
| MA0135.1 | 1.35921 |
| MA0136.1 | 0.948776 |
| MA0139.1 | 0.440097 |
| MA0140.1 | 0.894983 |
| MA0141.1 | 0.712476 |
| MA0142.1 | 1.12317 |
| MA0143.1 | 1.00455 |
| MA0144.1 | 0.531867 |
| MA0145.1 | 2.11725 |
| MA0146.1 | 1.70974 |
| MA0147.1 | 1.38767 |
| MA0148.1 | 0.854239 |
| MA0149.1 | 0.884158 |
| MA0062.2 | 1.141 |
| MA0035.2 | 0.894194 |
| MA0039.2 | 0.0526989 |
| MA0138.2 | 1.04628 |
| MA0002.2 | 0.476938 |
| MA0137.2 | 0.666381 |
| MA0104.2 | 1.2307 |
| MA0047.2 | 0.973066 |
| MA0112.2 | 0.731309 |
| MA0065.2 | 0.277623 |
| MA0150.1 | 0.744617 |
| MA0151.1 | 0 |
| MA0152.1 | 0.902317 |
| MA0153.1 | 1.43021 |
| MA0154.1 | 0.312019 |
| MA0155.1 | 1.31345 |
| MA0156.1 | 1.60572 |
| MA0157.1 | 1.09377 |
| MA0158.1 | 0 |
| MA0159.1 | 0.565904 |
| MA0160.1 | 0.871361 |
| MA0161.1 | 0 |
| MA0162.1 | 0.149099 |
| MA0163.1 | 0.122425 |
| MA0164.1 | 1.01792 |
| MA0080.2 | 1.55139 |
| MA0018.2 | 0.987913 |
| MA0099.2 | 0.902716 |
| MA0079.2 | 0.941469 |
| MA0102.2 | 1.88331 |
| MA0258.1 | 0.519674 |
| MA0259.1 | 0.575594 |
| MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
| TF | #promoters | Enrichment | p-value | q-value |
|---|---|---|---|---|
| ELF1#1997 | 3 | 4.25809795880754 | 0.0129517987505461 | 0.0461096574075635 |
| ELK4#2005 | 2 | 10.823787772312 | 0.0109128471951648 | 0.0401849957060791 |
| ESR1#2099 | 2 | 20.5124021974363 | 0.00309974157709518 | 0.0163057273380801 |
| FOSL1#8061 | 2 | 26.4757198109153 | 0.00186983370259098 | 0.0110236275509398 |
| FOSL2#2355 | 2 | 11.2868004030411 | 0.010053458697312 | 0.0376658477862162 |
| GATA3#2625 | 2 | 18.1576775714707 | 0.00394454681927962 | 0.018943510611061 |
| HNF4G#3174 | 2 | 19.1689483509645 | 0.00354398661128422 | 0.0179701130114052 |
| JUNB#3726 | 2 | 20.4070884398808 | 0.00313146219943874 | 0.016446081698038 |
| MAX#4149 | 3 | 6.45255550900712 | 0.00372191383426551 | 0.0186156294687446 |
| MEF2A#4205 | 2 | 12.495487273096 | 0.00823502947802974 | 0.0324819942463913 |
| MYC#4609 | 3 | 5.2222818716094 | 0.00702084375574015 | 0.0293875957278564 |
| NFKB1#4790 | 3 | 5.48806342419384 | 0.00604938181565543 | 0.0269110783935442 |
| NR3C1#2908 | 3 | 14.973023331173 | 0.000297833119467548 | 0.00308309972882063 |
| PAX5#5079 | 3 | 6.66956553117783 | 0.00337029099967726 | 0.0172620186217102 |
| RAD21#5885 | 3 | 10.3550338954563 | 0.000900491207356542 | 0.00662905485339465 |
| RXRA#6256 | 2 | 13.3830780927555 | 0.00719643442946573 | 0.0298213869530997 |
| SIN3A#25942 | 3 | 5.40888472681514 | 0.00631896197799152 | 0.027596640880633 |
| SMARCB1#6598 | 2 | 12.1684771874383 | 0.00867500222192174 | 0.032975743659883 |
| SMC3#9126 | 3 | 15.0449328449328 | 0.000293582542037187 | 0.00308496499726549 |
| SRF#6722 | 3 | 13.7971782621678 | 0.000380661502580019 | 0.00374455181953043 |
| TFAP2C#7022 | 3 | 10.8092286098602 | 0.000791674657575313 | 0.0061418592751826 |
| USF1#7391 | 3 | 6.36149927720796 | 0.0038840405729056 | 0.018990885458506 |
| ZNF263#10127 | 3 | 8.22184163701068 | 0.00179904392556587 | 0.0109143391543523 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.
