FFCP PHASE1:Hg19::chr3:48520617..48520638,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51246 | |EntrezGene=51246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30376 | |HGNC=30376 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=329bp_to_ENST00000486344,uc011bbl.1_5end | |association_with_transcript=329bp_to_ENST00000486344,uc011bbl.1_5end | ||
|cluster_id=chr3:48520617..48520638,- | |||
|description=CAGE_peak_9_at_SHISA5_5end | |description=CAGE_peak_9_at_SHISA5_5end | ||
|id=chr3:48520617..48520638,- | |id=chr3:48520617..48520638,- | ||
|ontology_enrichment_celltype=CL:0000542!7.07e-16!53;CL:0000051!7.07e-16!53;CL:0000838!2.39e-15!52;CL:0000791!1.11e-13!18;CL:0000789!1.11e-13!18;CL:0002420!1.11e-13!18;CL:0002419!1.11e-13!18;CL:0000790!1.11e-13!18;CL:0000084!4.81e-11!25;CL:0000827!4.81e-11!25;CL:0000236!2.00e-10!14;CL:0000625!1.55e-09!11;CL:0002087!4.72e-07!119 | |ontology_enrichment_celltype=CL:0000542!7.07e-16!53;CL:0000051!7.07e-16!53;CL:0000838!2.39e-15!52;CL:0000791!1.11e-13!18;CL:0000789!1.11e-13!18;CL:0002420!1.11e-13!18;CL:0002419!1.11e-13!18;CL:0000790!1.11e-13!18;CL:0000084!4.81e-11!25;CL:0000827!4.81e-11!25;CL:0000236!2.00e-10!14;CL:0000625!1.55e-09!11;CL:0002087!4.72e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.03e-32;18!CL:0000789;1.03e-32;18!CL:0002419;1.03e-32;18!CL:0000084;8.62e-25;25!CL:0000625;9.09e-24;11!CL:0000542;1.53e-23;53!CL:0000236;1.19e-20;13!CL:0000945;6.97e-10;24!CL:0000624;5.41e-09;6!CL:0000623;1.50e-07;3!CL:0002087;2.09e-07;104!CL:0000898;4.94e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.02e-38,53;CL:0000051,2.02e-38,53;CL:0000838,5.73e-37,52;CL:0000791,7.51e-33,18;CL:0000789,7.51e-33,18;CL:0002420,7.51e-33,18;CL:0002419,7.51e-33,18;CL:0000790,7.51e-33,18;CL:0000084,8.74e-25,25;CL:0000827,8.74e-25,25;CL:0000625,8.15e-24,11;CL:0002087,1.22e-19,115;CL:0000236,4.70e-19,14;CL:0000738,5.63e-19,136;CL:0002031,4.13e-14,120;CL:0000037,3.79e-13,168;CL:0000988,1.17e-12,177;CL:0002032,1.09e-11,161;CL:0000837,1.09e-11,161;CL:0000945,6.23e-10,24;CL:0000826,6.23e-10,24;CL:0000624,4.04e-09,6;CL:0000623,1.79e-07,3;CL:0000825,1.79e-07,3;CL:0000898,3.23e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.03e-32;18!CL:0000051;1.53e-23;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.20e-18;15!UBERON:0000179;2.20e-18;15!UBERON:0000463;2.20e-18;15!UBERON:0002390;1.78e-09;32!UBERON:0002193;1.03e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.43e-18,15;UBERON:0000179,1.43e-18,15;UBERON:0000463,1.43e-18,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,2.00146596706261,0,0,0,0,0.261185628199839,0,0,0,0.791300934685361,0.123766352960047,0.331397375727916,0,0,0,0,0,0.408001382488506,0.313454721478088,0.572471974262113,0.547497700291537,0.627713197974014,0,0,0,0.786728553697808,1.15148819429164,1.23852898652861,0,0,0,0.154934401160603,0,0,1.10799081706375,1.00272223735071,1.73608696572681,0.447830948479849,0,0.515151135268373,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0,0.56738522469114,0,0.502497330513487,0,0,0,0,0,0.211255286311942,0,0,0.336985893439485,0.450530678524519,0.16072558669708,0,0.19891667719909,0,3.51992488922645,6.55366333514558,8.89509253863555,2.56038133539904,0.400395987036012,5.74752439954483,5.2883589822789,7.63243003628291,7.96898156753228,6.45960908308033,3.82273228125229,0,0,0,2.55722701147983,0.393010762749165,4.5232329779892,3.00935691703221,1.62961133316795,4.73447805734733,0,5.9047542149142,7.07054177939609,13.9566353587681,8.12411591295047,6.14838334683241,6.76308607311367,4.93313713811028,5.52700035571697,3.47763702882063,0.741432815810302,0,0,1.69964014046349,1.91610246800961,4.81078423675682,3.79529538029254,3.50421955756506,4.55758417699493,3.8018081777935,3.16207750063323,3.58362511232371,4.99722906209383,4.2619905367923,4.92676798152628,5.64498881029251,5.61624411145365,3.18613688542158,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.351339142772504,0.261958150995425,0,0.370784442784429,0,0,0.26591592103773,0,0,0.371457501329565,0.198762407366705,0,0.694281003215189,0,0.419499436209906,0.825354125820202,0.626984899610432,0,0.35576626268671,0.33472061276467,0,0,0,0,2.43042584364528,0.0892997282840798,0.22452937262617,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,0,0,0,0.560677600142307,0,0,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0.448346041655403,0,0,0.140450806702248,0,0.122834317311768,0,0,0.741800787835671,0,0,0.336672227908132,0.250237039743928,0,0,0.612975591598039,0.300476117813194,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0.37223371266318,0,0,0,0,0.161646056818812,0.355009592516614,0.302256294682921,0,0,0,0,0.243947412259191,0,0.464775771478074,0.414644220061482,0,0,1.56449532329816,0,1.38134921352481,0,0,0,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0.100528972411631,0,0,0,0,0,0.117408694235822,0.288732895522148,1.85194205030644,0,1.58040879591855,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.399891964728228,1.2162378064119,0,0,0.239624855491583,1.14861935834114,0,0,0.821905290201534,0,3.13838403181876,4.53170748464433,3.45004119775228,3.20857590699371,0.254094624222463,0,0,0.167516265334349,0,2.24702107184155,0,1.24324654030811,0.24538298343828,0.500170521059677,0,0.207970861530807,0.713715955188647,0,0.234282829985426,0.300946099727719,0,0,1.99267679560631,0.553107505625109,0.173767228936166,0,0,1.86091223510599,1.2942852049117,2.881644060693,0,0,0.30239029332968,0,0.153461973288062,0.561320188866147,0.256278298511402,0.511707249066704,0,0,0.308419387605311,0,0,0,0.116210378459959,0,1.60405176242628,0.184161977871793,0.459257792658427,0,1.04899531967539,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0,4.62681758070868,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0.412164046590889,0,0,0,0,0,0,0,0.307007349452259,0,0,0.290033387828457,0,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0.632758849437452,0,0.255897791311334,0,0.318203247925937,0,0,0.54907405947211,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0.272999822815972,0.848432591722276,0,0,0,1.75380354101505,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0,0,0.35667105148125,0.354761064070598,0.422215270595328,0.987884678879706,0.379473173765715,0,0,0,0,0.376575203107117,0,0,0.886860307073351,0,2.53723804616085,3.0585488285695,3.98753031021914,2.38231775457789,4.52498500394814,1.94541993357815,3.24018862342869,6.34500141035416,0.106824071127473,0,0,1.30062222588003,0.865615277858669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0.111443384277478,0.852408440419239,0,0,0.614321404198464,0,0,0,0,0,0.398495976502139,1.65770349318689,0,0,0.246169610922139,0,0,0,0.511572370226872,0.690503839458535,4.7896618469388,0,0,0.0927680981618513,0,0.260427761085233,0,1.44999915086959,0.227586896570999,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0.1089384635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| 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| ||
|short_description=p9@SHISA5 | |short_description=p9@SHISA5 | ||
}} | }} |
Latest revision as of 14:18, 18 September 2015
Short description: | p9@SHISA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SHISA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 329bp_to_ENST00000486344, uc011bbl.1_5end |
EntrezGene: | SHISA5 |
HGNC: | 30376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.02e-38 | 53 |
common lymphoid progenitor | 2.02e-38 | 53 |
lymphoid lineage restricted progenitor cell | 5.73e-37 | 52 |
mature alpha-beta T cell | 7.51e-33 | 18 |
alpha-beta T cell | 7.51e-33 | 18 |
immature T cell | 7.51e-33 | 18 |
mature T cell | 7.51e-33 | 18 |
immature alpha-beta T cell | 7.51e-33 | 18 |
T cell | 8.74e-25 | 25 |
pro-T cell | 8.74e-25 | 25 |
CD8-positive, alpha-beta T cell | 8.15e-24 | 11 |
nongranular leukocyte | 1.22e-19 | 115 |
B cell | 4.70e-19 | 14 |
leukocyte | 5.63e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 4.13e-14 | 120 |
hematopoietic stem cell | 3.79e-13 | 168 |
hematopoietic cell | 1.17e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.09e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-11 | 161 |
lymphocyte of B lineage | 6.23e-10 | 24 |
pro-B cell | 6.23e-10 | 24 |
CD4-positive, alpha-beta T cell | 4.04e-09 | 6 |
natural killer cell | 1.79e-07 | 3 |
pro-NK cell | 1.79e-07 | 3 |
naive T cell | 3.23e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.43e-18 | 15 |
haemolymphatic fluid | 1.43e-18 | 15 |
organism substance | 1.43e-18 | 15 |