FFCP PHASE1:Hg19::chr17:67513291..67513311,+: Difference between revisions
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|id=chr17:67513291..67513311,+
|short_description=p@chr17:67513291..67513311,+
|description=CAGE_peak_at_chr17:67513291..67513311,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:67513291..67513311,+ | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_at_chr17:67513291..67513311,+ | |||
|id=chr17:67513291..67513311,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.82e-16!24;CL:0000826!4.82e-16!24;CL:0000946!9.44e-10!1;CL:0000786!9.44e-10!1;CL:0000980!9.44e-10!1;CL:0002553!1.69e-09!1;CL:0000838!5.68e-07!52;CL:0000542!7.96e-07!53;CL:0000051!7.96e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000946;1.67e-23;1!CL:0000786;1.67e-23;1!CL:0000945;3.98e-23;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.67e-23,1;CL:0000786,1.67e-23,1;CL:0000980,1.67e-23,1;CL:0000945,3.98e-23,24;CL:0000826,3.98e-23,24;CL:0000785,1.85e-12,2;CL:0000955,1.85e-12,2;CL:0000818,1.85e-12,2;CL:0000954,1.85e-12,2;CL:0000816,1.85e-12,2;CL:0000838,8.41e-11,52;CL:0000542,1.34e-10,53;CL:0000051,1.34e-10,53;CL:0000817,9.66e-09,3;CL:0002087,8.01e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.10e-23;1!CL:0000954;1.85e-12;2 | |||
|ontology_enrichment_disease=DOID:630!8.68e-10!1;DOID:0050177!8.68e-10!1;DOID:0050427!8.68e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:630;1.34e-23;1!DOID:0050177;1.34e-23;1!DOID:0050427;1.34e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.34e-23,1;DOID:0050177,1.34e-23,1;DOID:0050427,1.34e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.81e-24!3;UBERON:0004854!1.81e-24!3;UBERON:0009034!1.81e-24!3;UBERON:0002095!1.81e-24!3;UBERON:0004782!1.81e-24!3;UBERON:0003281!1.81e-24!3;UBERON:0009664!1.81e-24!3;UBERON:0002296!1.81e-24!3;UBERON:0005602!1.81e-24!3;UBERON:0001179!1.81e-24!3;UBERON:0006293!1.81e-24!3;UBERON:0004177!7.97e-11!7;UBERON:0001154!1.43e-09!1;UBERON:0001153!1.43e-09!1;UBERON:0000945!1.55e-09!8;UBERON:0010039!1.55e-09!8;UBERON:0002372!2.77e-09!1;UBERON:0001961!2.77e-09!1;UBERON:0001744!2.77e-09!1;UBERON:0001735!2.77e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.10e-23;1!UBERON:0001153;4.10e-23;1!UBERON:0009854;4.10e-23;1!UBERON:0002106;8.31e-09;3!UBERON:0009856;9.10e-07;4!UBERON:0002119;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.13e-23,1;UBERON:0001153,5.13e-23,1;UBERON:0001045,5.13e-23,1;UBERON:0002106,8.31e-09,3;UBERON:0004854,8.31e-09,3;UBERON:0009034,8.31e-09,3;UBERON:0002095,8.31e-09,3;UBERON:0004782,8.31e-09,3;UBERON:0003281,8.31e-09,3;UBERON:0009664,8.31e-09,3;UBERON:0002296,8.31e-09,3;UBERON:0005602,8.31e-09,3;UBERON:0001179,8.31e-09,3;UBERON:0006293,8.31e-09,3;UBERON:0002119,9.11e-07,4 | |||
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|short_description=p@chr17:67513291..67513311,+ | |||
}} | }} |
Latest revision as of 20:22, 25 July 2015
Short description: | p@chr17:67513291..67513311, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:67513291..67513311, + |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.67e-23 | 1 |
plasma cell | 1.67e-23 | 1 |
plasmablast | 1.67e-23 | 1 |
lymphocyte of B lineage | 3.98e-23 | 24 |
pro-B cell | 3.98e-23 | 24 |
mature B cell | 1.85e-12 | 2 |
pre-B-II cell | 1.85e-12 | 2 |
transitional stage B cell | 1.85e-12 | 2 |
small pre-B-II cell | 1.85e-12 | 2 |
immature B cell | 1.85e-12 | 2 |
lymphoid lineage restricted progenitor cell | 8.41e-11 | 52 |
lymphocyte | 1.34e-10 | 53 |
common lymphoid progenitor | 1.34e-10 | 53 |
precursor B cell | 9.66e-09 | 3 |
nongranular leukocyte | 8.01e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.13e-23 | 1 |
caecum | 5.13e-23 | 1 |
midgut | 5.13e-23 | 1 |
spleen | 8.31e-09 | 3 |
gastrointestinal system mesentery | 8.31e-09 | 3 |
stomach region | 8.31e-09 | 3 |
mesentery | 8.31e-09 | 3 |
gastrointestinal system serosa | 8.31e-09 | 3 |
mesentery of stomach | 8.31e-09 | 3 |
gut mesentery | 8.31e-09 | 3 |
dorsal mesentery | 8.31e-09 | 3 |
dorsal mesogastrium | 8.31e-09 | 3 |
peritoneal cavity | 8.31e-09 | 3 |
spleen primordium | 8.31e-09 | 3 |
left ovary | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.34e-23 | 1 |
monogenic disease | 1.34e-23 | 1 |
xeroderma pigmentosum | 1.34e-23 | 1 |