FFCP PHASE1:Hg19::chr3:150481260..150481282,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6478 | |EntrezGene=6478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10858 | |HGNC=10858 | ||
|TSSclassifier=strong | |||
|UniProt=O43255 | |UniProt=O43255 | ||
|association_with_transcript=0bp_to_ENST00000472885,NM_005067,uc003eyi.2_5end | |association_with_transcript=0bp_to_ENST00000472885,NM_005067,uc003eyi.2_5end | ||
|cluster_id=chr3:150481260..150481282,- | |||
|description=CAGE_peak_2_at_SIAH2_5end | |description=CAGE_peak_2_at_SIAH2_5end | ||
|id=chr3:150481260..150481282,- | |id=chr3:150481260..150481282,- | ||
|ontology_enrichment_celltype=CL:0002057!7.61e-16!42;CL:0000860!1.47e-14!45;CL:0000738!3.17e-11!140;CL:0002031!9.66e-11!124;CL:0002087!3.24e-10!119;CL:0000839!3.64e-10!70;CL:0000766!6.94e-09!76;CL:0002194!1.58e-08!63;CL:0000576!1.58e-08!63;CL:0000040!1.58e-08!63;CL:0000559!1.58e-08!63;CL:0000557!1.99e-08!71;CL:0002032!2.28e-08!165;CL:0000837!2.28e-08!165;CL:0002009!2.81e-08!65;CL:0000037!3.32e-08!172;CL:0000566!3.32e-08!172;CL:0000988!1.42e-07!182 | |ontology_enrichment_celltype=CL:0002057!7.61e-16!42;CL:0000860!1.47e-14!45;CL:0000738!3.17e-11!140;CL:0002031!9.66e-11!124;CL:0002087!3.24e-10!119;CL:0000839!3.64e-10!70;CL:0000766!6.94e-09!76;CL:0002194!1.58e-08!63;CL:0000576!1.58e-08!63;CL:0000040!1.58e-08!63;CL:0000559!1.58e-08!63;CL:0000557!1.99e-08!71;CL:0002032!2.28e-08!165;CL:0000837!2.28e-08!165;CL:0002009!2.81e-08!65;CL:0000037!3.32e-08!172;CL:0000566!3.32e-08!172;CL:0000988!1.42e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.62e-18;33!CL:0002057;1.62e-18;33!CL:0000473;2.77e-11;39!CL:0000234;2.77e-11;39!CL:0000576;3.87e-11;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.35e-17,42;CL:0002057,1.35e-17,42;CL:0000473,2.25e-13,48;CL:0000234,2.25e-13,48;CL:0000839,5.47e-13,66;CL:0000738,1.32e-12,136;CL:0002031,4.15e-12,120;CL:0000766,2.10e-11,72;CL:0000557,2.54e-11,67;CL:0002087,3.35e-11,115;CL:0002194,7.09e-11,59;CL:0000576,7.09e-11,59;CL:0000040,7.09e-11,59;CL:0000559,7.09e-11,59;CL:0002009,7.39e-11,61;CL:0002032,9.45e-11,161;CL:0000837,9.45e-11,161;CL:0000037,2.07e-10,168;CL:0000763,9.86e-10,108;CL:0000049,9.86e-10,108;CL:0000988,2.38e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.91e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.07e-12!102;UBERON:0003061!3.07e-12!102;UBERON:0002193!8.13e-12!112;UBERON:0002405!8.02e-09!115;UBERON:0003081!1.05e-07!216;UBERON:0002371!3.86e-07!80;UBERON:0000178!8.31e-07!15;UBERON:0000179!8.31e-07!15;UBERON:0000463!8.31e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!3.07e-12!102;UBERON:0003061!3.07e-12!102;UBERON:0002193!8.13e-12!112;UBERON:0002405!8.02e-09!115;UBERON:0003081!1.05e-07!216;UBERON:0002371!3.86e-07!80;UBERON:0000178!8.31e-07!15;UBERON:0000179!8.31e-07!15;UBERON:0000463!8.31e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.80e-07;15!UBERON:0000179;3.80e-07;15!UBERON:0000463;3.80e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.96e-16,98;UBERON:0003061,9.96e-16,98;UBERON:0002193,1.10e-15,108;UBERON:0002405,9.71e-11,93;UBERON:0002371,1.12e-09,76;UBERON:0003081,9.35e-09,203;UBERON:0001474,8.24e-08,82;UBERON:0000178,2.96e-07,15;UBERON:0000179,2.96e-07,15;UBERON:0000463,2.96e-07,15;UBERON:0004765,4.41e-07,90 | |||
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| ||
|short_description=p2@SIAH2 | |short_description=p2@SIAH2 | ||
}} | }} |
Latest revision as of 00:17, 16 September 2015
Short description: | p2@SIAH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIAH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000472885, NM_005067, uc003eyi.2_5end |
EntrezGene: | SIAH2 |
HGNC: | 10858 |
UniProt: | O43255 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.35e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-17 | 42 |
defensive cell | 2.25e-13 | 48 |
phagocyte | 2.25e-13 | 48 |
myeloid lineage restricted progenitor cell | 5.47e-13 | 66 |
leukocyte | 1.32e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 4.15e-12 | 120 |
myeloid leukocyte | 2.10e-11 | 72 |
granulocyte monocyte progenitor cell | 2.54e-11 | 67 |
nongranular leukocyte | 3.35e-11 | 115 |
monopoietic cell | 7.09e-11 | 59 |
monocyte | 7.09e-11 | 59 |
monoblast | 7.09e-11 | 59 |
promonocyte | 7.09e-11 | 59 |
macrophage dendritic cell progenitor | 7.39e-11 | 61 |
hematopoietic oligopotent progenitor cell | 9.45e-11 | 161 |
hematopoietic multipotent progenitor cell | 9.45e-11 | 161 |
hematopoietic stem cell | 2.07e-10 | 168 |
myeloid cell | 9.86e-10 | 108 |
common myeloid progenitor | 9.86e-10 | 108 |
hematopoietic cell | 2.38e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.96e-16 | 98 |
blood island | 9.96e-16 | 98 |
hemolymphoid system | 1.10e-15 | 108 |
immune system | 9.71e-11 | 93 |
bone marrow | 1.12e-09 | 76 |
lateral plate mesoderm | 9.35e-09 | 203 |
bone element | 8.24e-08 | 82 |
blood | 2.96e-07 | 15 |
haemolymphatic fluid | 2.96e-07 | 15 |
organism substance | 2.96e-07 | 15 |
skeletal element | 4.41e-07 | 90 |