FFCP PHASE1:Hg19::chr17:6544356..6544363,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:6544356..6544363,+
|short_description=p3@TXNDC17
|description=CAGE_peak_3_at_TXNDC17_5end
|association_with_transcript=134bp_to_NM_032731,uc002gdf.3_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84817 | |EntrezGene=84817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28218 | |HGNC=28218 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRA2 | |UniProt=Q9BRA2 | ||
|association_with_transcript=134bp_to_NM_032731,uc002gdf.3_5end | |||
|cluster_id=chr17:6544356..6544363,+ | |||
|coexpression_cluster_id=C3668 | |||
|description=CAGE_peak_3_at_TXNDC17_5end | |||
|id=chr17:6544356..6544363,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.02e-25!248;CL:0000220!3.11e-25!246;CL:0000548!4.27e-25!679;CL:0000004!4.27e-25!679;CL:0000255!4.27e-25!679;CL:0000012!2.32e-24!682;CL:0000144!3.07e-18!625;CL:0000066!4.41e-18!254;CL:0002371!8.39e-17!591;CL:0000003!2.12e-15!722;CL:0000055!6.40e-14!180;CL:0000222!1.17e-13!119;CL:0000183!1.86e-12!59;CL:0000393!4.21e-12!60;CL:0000211!4.21e-12!60;CL:0000680!4.69e-11!57;CL:0000056!4.69e-11!57;CL:0000355!4.69e-11!57;CL:0000187!1.30e-10!54;CL:0000192!1.05e-08!42;CL:0000514!1.05e-08!42;CL:0000063!4.74e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:1000449;4.45e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.66e-26,250;CL:0000066,3.83e-18,253;CL:0000222,6.37e-14,121;CL:0000393,6.65e-12,61;CL:0000211,6.65e-12,61;CL:0000680,7.27e-11,58;CL:0000056,7.27e-11,58;CL:0000355,7.27e-11,58;CL:0000187,2.02e-10,55;CL:0000192,1.65e-08,43;CL:0000514,1.65e-08,43;CL:1000449,5.91e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.48e-14!143;UBERON:0000486!5.61e-13!82;UBERON:0003104!7.36e-13!238;UBERON:0009142!7.36e-13!238;UBERON:0000914!1.96e-12!83;UBERON:0002329!1.96e-12!83;UBERON:0003077!1.96e-12!83;UBERON:0003059!1.96e-12!83;UBERON:0007282!1.96e-12!83;UBERON:0009618!1.96e-12!83;UBERON:0007285!1.96e-12!83;UBERON:0002100!2.43e-12!216;UBERON:0004290!4.70e-11!70;UBERON:0003914!1.06e-09!118;UBERON:0000490!1.75e-09!138;UBERON:0001134!1.28e-08!61;UBERON:0002036!1.28e-08!61;UBERON:0003082!1.28e-08!61;UBERON:0002385!4.84e-08!63;UBERON:0001015!4.84e-08!63;UBERON:0000383!4.84e-08!63;UBERON:0002049!5.19e-08!79;UBERON:0007798!5.19e-08!79;UBERON:0000481!1.88e-07!347;UBERON:0001637!6.70e-07!42;UBERON:0003509!6.70e-07!42;UBERON:0004572!6.70e-07!42;UBERON:0001981!7.26e-07!60;UBERON:0007500!7.26e-07!60;UBERON:0004537!7.26e-07!60;UBERON:0006965!7.26e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.45e-07;15!UBERON:0004819;4.45e-07;15!UBERON:0001285;4.45e-07;15!UBERON:0007684;4.45e-07;15!UBERON:0000353;7.63e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.60e-13,78;UBERON:0000486,6.96e-13,83;UBERON:0000490,1.65e-11,148;UBERON:0002100,1.89e-11,199;UBERON:0002329,5.84e-11,71;UBERON:0003059,5.84e-11,71;UBERON:0007282,5.84e-11,71;UBERON:0004290,5.84e-11,71;UBERON:0009618,5.84e-11,71;UBERON:0003104,1.16e-10,160;UBERON:0009142,1.16e-10,160;UBERON:0005256,1.92e-10,122;UBERON:0007524,2.48e-10,73;UBERON:0003077,2.63e-10,72;UBERON:0007285,2.63e-10,72;UBERON:0003914,8.41e-10,117;UBERON:0001134,1.54e-08,62;UBERON:0002036,1.54e-08,62;UBERON:0003082,1.54e-08,62;UBERON:0002385,5.70e-08,64;UBERON:0001015,5.70e-08,64;UBERON:0000383,5.70e-08,64;UBERON:0002049,5.93e-08,78;UBERON:0007798,5.93e-08,78;UBERON:0004211,5.91e-07,15;UBERON:0009773,5.91e-07,15;UBERON:0001231,5.91e-07,15;UBERON:0001285,5.91e-07,15;UBERON:0007684,5.91e-07,15;UBERON:0004208,5.91e-07,15;UBERON:0001637,6.62e-07,42;UBERON:0003509,6.62e-07,42;UBERON:0004572,6.62e-07,42;UBERON:0007500,8.24e-07,59;UBERON:0001981,8.24e-07,59;UBERON:0004537,8.24e-07,59;UBERON:0006965,8.24e-07,59;UBERON:0000353,9.97e-07,15 | |||
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| ||
|short_description=p3@TXNDC17 | |||
}} | }} |
Latest revision as of 22:11, 16 September 2015
Short description: | p3@TXNDC17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TXNDC17_5end |
Coexpression cluster: | C3668_Mallassezderived_Prostate_Urothelial_Bronchial_Gingival_Small_Esophageal |
Association with transcript: | 134bp_to_NM_032731, uc002gdf.3_5end |
EntrezGene: | TXNDC17 |
HGNC: | 28218 |
UniProt: | Q9BRA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.66e-26 | 250 |
epithelial cell | 3.83e-18 | 253 |
mesodermal cell | 6.37e-14 | 121 |
electrically responsive cell | 6.65e-12 | 61 |
electrically active cell | 6.65e-12 | 61 |
muscle precursor cell | 7.27e-11 | 58 |
myoblast | 7.27e-11 | 58 |
multi-potent skeletal muscle stem cell | 7.27e-11 | 58 |
muscle cell | 2.02e-10 | 55 |
smooth muscle cell | 1.65e-08 | 43 |
smooth muscle myoblast | 1.65e-08 | 43 |
epithelial cell of nephron | 5.91e-07 | 15 |