FFCP PHASE1:Hg19::chr17:64960778..64960804,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:64960778..64960804,+
|short_description=p2@CACNG4
|description=CAGE_peak_2_at_CACNG4_5end
|association_with_transcript=-175bp_to_NM_014405_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27092 | |EntrezGene=27092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1408 | |HGNC=1408 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBN1 | |UniProt=Q9UBN1 | ||
|association_with_transcript=-175bp_to_NM_014405_5end | |||
|cluster_id=chr17:64960778..64960804,+ | |||
|coexpression_cluster_id=C3666 | |||
|description=CAGE_peak_2_at_CACNG4_5end | |||
|id=chr17:64960778..64960804,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.82e-10!25;CL:0000133!7.55e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.87e-09;25!CL:0000128;8.54e-07;7!CL:0000126;8.54e-07;7!CL:0000127;8.54e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.91e-09,25;CL:0000133,6.68e-08,59;CL:0000128,7.94e-07,7;CL:0000126,7.94e-07,7;CL:0000127,7.94e-07,7;CL:0002453,7.94e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.03e-08;82 | |||
|ontology_enrichment_disease=DOID:0050687!1.16e-12!143;DOID:305!1.80e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.09e-07;4!DOID:1612;7.09e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.37e-08,143;DOID:305,2.38e-07,106;DOID:5093,7.21e-07,4;DOID:1612,7.21e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.44e-36!82;UBERON:0005743!1.96e-34!86;UBERON:0000073!8.33e-34!94;UBERON:0001016!8.33e-34!94;UBERON:0001049!5.61e-30!57;UBERON:0005068!5.61e-30!57;UBERON:0006241!5.61e-30!57;UBERON:0007135!5.61e-30!57;UBERON:0000955!2.02e-29!69;UBERON:0006238!2.02e-29!69;UBERON:0002616!1.32e-24!59;UBERON:0003080!1.04e-22!42;UBERON:0002780!2.06e-22!41;UBERON:0001890!2.06e-22!41;UBERON:0006240!2.06e-22!41;UBERON:0003075!2.53e-22!86;UBERON:0007284!2.53e-22!86;UBERON:0001893!5.19e-22!34;UBERON:0002346!9.25e-22!90;UBERON:0002020!9.64e-22!34;UBERON:0003528!9.64e-22!34;UBERON:0004121!1.14e-21!169;UBERON:0000924!1.66e-21!173;UBERON:0006601!1.66e-21!173;UBERON:0002791!2.26e-21!33;UBERON:0001869!4.18e-21!32;UBERON:0000033!9.89e-18!123;UBERON:0003056!2.29e-17!61;UBERON:0000153!7.78e-17!129;UBERON:0007811!7.78e-17!129;UBERON:0000956!4.22e-16!25;UBERON:0000203!4.22e-16!25;UBERON:0002619!1.16e-13!22;UBERON:0001950!1.38e-12!20;UBERON:0007023!4.55e-12!115;UBERON:0000064!4.43e-11!219;UBERON:0000062!4.71e-10!511;UBERON:0003076!2.24e-08!15;UBERON:0003057!2.24e-08!15;UBERON:0002420!1.52e-07!9;UBERON:0007245!1.52e-07!9;UBERON:0010009!1.52e-07!9;UBERON:0010011!1.52e-07!9;UBERON:0000454!1.52e-07!9;UBERON:0002308!4.19e-07!9;UBERON:0000125!4.19e-07!9;UBERON:0000475!4.94e-07!365;UBERON:0000922!5.19e-07!612;UBERON:0004732!7.06e-07!13;UBERON:0000468!9.16e-07!659;UBERON:0001871!9.87e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.24e-25;32!UBERON:0001893;1.57e-24;34!UBERON:0003528;1.97e-24;34!UBERON:0002020;1.97e-24;34!UBERON:0002791;6.90e-24;32!UBERON:0000956;5.38e-21;25!UBERON:0000203;5.38e-21;25!UBERON:0002780;1.82e-19;41!UBERON:0001890;1.82e-19;41!UBERON:0000073;6.33e-19;53!UBERON:0002616;6.33e-19;53!UBERON:0002619;1.67e-17;22!UBERON:0001950;5.01e-16;20!UBERON:0001017;8.51e-16;75!UBERON:0000955;7.79e-15;68!UBERON:0001016;8.09e-15;83!UBERON:0002420;1.20e-08;9!UBERON:0007245;1.20e-08;9!UBERON:0010009;1.20e-08;9!UBERON:0010011;1.20e-08;9!UBERON:0000454;1.20e-08;9!UBERON:0001871;2.43e-08;6!UBERON:0004732;2.92e-08;13!UBERON:0000125;4.59e-08;9!UBERON:0002308;4.59e-08;9!UBERON:0004733;1.22e-07;12!UBERON:0002028;1.22e-07;12!UBERON:0002680;5.64e-07;9!UBERON:0001895;5.64e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.74e-40,89;UBERON:0001017,6.30e-40,81;UBERON:0001049,1.04e-36,56;UBERON:0005068,1.04e-36,56;UBERON:0006241,1.04e-36,56;UBERON:0007135,1.04e-36,56;UBERON:0000073,9.20e-34,53;UBERON:0002616,9.20e-34,53;UBERON:0000955,2.15e-33,68;UBERON:0006238,2.15e-33,68;UBERON:0001869,9.83e-29,32;UBERON:0001893,1.44e-28,34;UBERON:0003528,3.40e-28,34;UBERON:0002020,3.40e-28,34;UBERON:0002780,2.19e-27,41;UBERON:0001890,2.19e-27,41;UBERON:0003080,2.19e-27,41;UBERON:0006240,2.19e-27,41;UBERON:0002791,1.22e-26,32;UBERON:0003075,1.51e-25,82;UBERON:0007284,1.51e-25,82;UBERON:0002346,1.40e-24,86;UBERON:0004121,2.35e-23,171;UBERON:0000924,2.35e-23,171;UBERON:0006601,2.35e-23,171;UBERON:0011216,1.69e-22,223;UBERON:0000956,1.85e-21,25;UBERON:0000203,1.85e-21,25;UBERON:0010371,7.56e-20,104;UBERON:0003056,4.49e-19,61;UBERON:0002619,6.10e-18,22;UBERON:0001950,2.27e-16,20;UBERON:0010314,5.82e-13,132;UBERON:0003076,2.61e-10,15;UBERON:0003057,2.61e-10,15;UBERON:0007023,9.03e-09,114;UBERON:0002420,9.96e-09,9;UBERON:0007245,9.96e-09,9;UBERON:0010009,9.96e-09,9;UBERON:0010011,9.96e-09,9;UBERON:0000454,9.96e-09,9;UBERON:0001871,1.34e-08,6;UBERON:0004732,3.41e-08,13;UBERON:0000125,3.80e-08,9;UBERON:0002308,3.80e-08,9;UBERON:0004733,1.41e-07,12;UBERON:0002028,1.41e-07,12;UBERON:0007277,1.41e-07,12;UBERON:0002680,7.48e-07,9;UBERON:0001895,7.48e-07,9;UBERON:0010092,7.48e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,2.83973783769224,4.22027165165526,0,0,0,0,0,0,1.47745269692145,0,4.38836610069323,14.884271330815,18.6149218099122,4.89616294419731,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22895262313288,0.221729397462564,0.614843499851882,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,1.74437620857014,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0,0,1.25572744982203,0,0,0,0,0,0,0,0,0,0,0,0,0.705264687593482,1.01736355386293,0,0,0,0.487894824518382,1.72288698817931,1.51052125730374,2.48786532036889,2.52320850875628,1.09493207722749,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,2.09080345523293,0,0,0,0,0.555530670951178,0,0,0,5.68058984377876,0,0,0,0,64.0065562347013,42.9243081047436,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,24.138989301134,13.0139853857622,10.05275456611,18.7618217174471,15.3105300396759,0,0,0,0,0,0,1.45579603071565,1.78428988797162,0.473107245101804,1.28855556491985,0,0,2.0694614258501,0,0,0,0,0.686286847621712,0,0,0,2.12189300012382,8.32177197552485,13.0027826131763,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,3.14234568938218,0,0.0920809889358963,0,0,0,0.451199612907412,0.693138033939733,0,1.46139224653261,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,1.28197250745681,1.73269949833235,0,0,0,0.096670718292122,0,0,0,0,0,0.255679882248303,3.11612124763581,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,1.03558180854457,0,0,1.7737206141467,1.37834040124176,0,0,0,0,0,0,0,0,0.640944426764839,0,0.245040215981032,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,3.34242278632766,5.3453642549875,3.37876772309155,3.97659059106519,5.62677665642051,0,0,0,0.19924798825107,0,1.76352923497993,13.4994660902844,0,0,0.898683511473268,5.01259289091706,0,0,0,0,2.90799823828566,1.39152147242777,45.9111735402747,36.9807420741031,6.38457999972229,0.724999575434793,0.455173793141999,0,0.472775363535873,8.27384095779515,1.16641845353302,5.72962483279864,2.65722415744152,11.9390474239154,4.5774520895125,1.21637185924347,2.06883333267483,2.4132393686937,0,8.5048484009948,0.615602068030377,0.113942055847001,0.46112780877612,1.43612231055635,0.217294743844016,0.957003479195758,2.01514705484097,0,0,0,0,0,0,0,0,0,0,11.099830954822,2.26164914294305,0.216388639742091,0,0.0884575645033392,1.22206028986725,0,0,0.104421949505455,3.63966118095656,0,5.3880822516828,0,8.60924323301195,0.728341138602278,0.789168805698781,2.41981432097328,33.9740765409844,0,0.150323419414493,0.311064574191741,1.32930774541437,1.98595173525299,0.627865836814451,0,0,0,3.81831424337288,1.07791637155815,0,0.34945333648406,0,0,0,0,0.581934098930517,0.264768380074501,1.35588444468319,0,0,2.34249945036751,3.91102765469606,0.160317640503067,0.213452994739353,0.19980960958213,0.288180834308212,0,2.23073497220554,0,0,5.89235086541989,7.88244395226961,8.57743339761132,1.93796613509011,0,3.00210144354895,2.73810757783986,0,2.57859264851974,0,0,0,0,5.39133301347276,0,0,0.604651252380536,0,1.16495949527454,0.0787831823072236,0,0,1.18112977817699,0,1.59045937961861,2.72406812223151,0.482259445395058,0.825236619583403,0.83088067605837,0,0.77380195455795,4.9207140893,5.70238968918752,0.0788057072991982,0.262272940674991,0.422401346077626,0.35857467866569,22.4540780863751,0,0,0.76280561296425,0,0,0,1.19730191562487,0,0,0.906496732161005,0,0,1.68067843270016,2.24795422962573,1.88195521672762,26.7829708480335,2.99004755189545,0.157204305099666,2.89967338743037,0,0,0,0,0,0,0,0,2.66991963625398,0.886068179966986,2.92863035764712,1.251909307065,1.72022758707021,0.998361463831671,3.41530216177609,0.553394539744923,0.124980407962107,0,0,0,14.0500471742064,1.88397337194073,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,3.85994864474866,0.521988583930423,1.58694147858591,0,0,2.50724377514082,10.808050650634,0.877136198314828,0.530067437837643,1.15748422962549,0.675769762612291,0.512483037175893,6.21774615116157,0.303859956177382,1.93561810612423,0,0,0.654261577023377,3.60370833731054,0.491545817507439,0,0,0,0,3.97261167496785,0,0.139879507719444,1.86623178009892,14.0683808434017,12.3998533106184,0,11.3578023719694,0,1.06287460050841,0.123935764259002,0,0,0,0,1.05802783107205,1.8374728641192,7.32213166099639,0,1.59633859057151,1.8460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| ||
|short_description=p2@CACNG4 | |||
}} | }} |
Latest revision as of 21:35, 16 September 2015
Short description: | p2@CACNG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CACNG4_5end |
Coexpression cluster: | C3666_MCF7_breast_Neural_brain_duodenum_temporal_parietal |
Association with transcript: | -175bp_to_NM_014405_5end |
EntrezGene: | CACNG4 |
HGNC: | 1408 |
UniProt: | Q9UBN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.91e-09 | 25 |
neurectodermal cell | 6.68e-08 | 59 |
oligodendrocyte | 7.94e-07 | 7 |
macroglial cell | 7.94e-07 | 7 |
astrocyte | 7.94e-07 | 7 |
oligodendrocyte precursor cell | 7.94e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.37e-08 | 143 |
carcinoma | 2.38e-07 | 106 |
thoracic cancer | 7.21e-07 | 4 |
breast cancer | 7.21e-07 | 4 |