FFCP PHASE1:Hg19::chr22:36013368..36013383,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4151 | |EntrezGene=4151 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6915 | |HGNC=6915 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYF7,B4DUI1,P02144 | |UniProt=B0QYF7,B4DUI1,P02144 | ||
|association_with_transcript=0bp_to_ENST00000442617,ENST00000453997,NM_005368,uc003anz.2_5end | |association_with_transcript=0bp_to_ENST00000442617,ENST00000453997,NM_005368,uc003anz.2_5end | ||
|cluster_id=chr22:36013368..36013383,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_MB_5end | |description=CAGE_peak_1_at_MB_5end | ||
|id=chr22:36013368..36013383,- | |id=chr22:36013368..36013383,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;3.84e-10;65!UBERON:0005062;5.42e-10;4!UBERON:0007284;5.42e-10;4!UBERON:0006965;1.02e-08;2 | |||
|ontology_enrichment_disease=DOID:114!6.82e-07!2 | |ontology_enrichment_disease=DOID:114!6.82e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:114;1.25e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.25e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.64e-35!115;UBERON:0003103!6.21e-13!69;UBERON:0007100!4.20e-12!27;UBERON:0004151!2.55e-09!3;UBERON:0003978!2.99e-09!3;UBERON:0009751!2.99e-09!3;UBERON:0000946!2.99e-09!3;UBERON:0002523!2.99e-09!3;UBERON:0005983!2.99e-09!3;UBERON:0002165!2.99e-09!3;UBERON:0002062!2.99e-09!3;UBERON:0007280!2.99e-09!3;UBERON:0000948!1.62e-07!24;UBERON:0005498!1.62e-07!24;UBERON:0004140!1.62e-07!24;UBERON:0009881!1.62e-07!24;UBERON:0004141!1.62e-07!24;UBERON:0003084!1.62e-07!24;UBERON:0007005!1.62e-07!24;UBERON:0004139!1.62e-07!24;UBERON:0004291!1.62e-07!24;UBERON:0001630!7.82e-07!2;UBERON:0005090!7.82e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!3.64e-35!115;UBERON:0003103!6.21e-13!69;UBERON:0007100!4.20e-12!27;UBERON:0004151!2.55e-09!3;UBERON:0003978!2.99e-09!3;UBERON:0009751!2.99e-09!3;UBERON:0000946!2.99e-09!3;UBERON:0002523!2.99e-09!3;UBERON:0005983!2.99e-09!3;UBERON:0002165!2.99e-09!3;UBERON:0002062!2.99e-09!3;UBERON:0007280!2.99e-09!3;UBERON:0000948!1.62e-07!24;UBERON:0005498!1.62e-07!24;UBERON:0004140!1.62e-07!24;UBERON:0009881!1.62e-07!24;UBERON:0004141!1.62e-07!24;UBERON:0003084!1.62e-07!24;UBERON:0007005!1.62e-07!24;UBERON:0004139!1.62e-07!24;UBERON:0004291!1.62e-07!24;UBERON:0001630!7.82e-07!2;UBERON:0005090!7.82e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.13e-17;25!UBERON:0004151;2.74e-13;3!UBERON:0003978;3.49e-13;3!UBERON:0000946;3.49e-13;3!UBERON:0000948;1.60e-10;22!UBERON:0005090;1.54e-09;2!UBERON:0001630;1.54e-09;2!UBERON:0002081;2.62e-09;2!UBERON:0002133;2.95e-09;2!UBERON:0000341;3.84e-09;2!UBERON:0001829;5.40e-09;2!UBERON:0003127;6.59e-09;2!UBERON:0003103;5.05e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.22e-24,114;UBERON:0003103,9.90e-17,68;UBERON:0007100,3.50e-16,27;UBERON:0004151,2.74e-13,3;UBERON:0003978,3.49e-13,3;UBERON:0009751,3.49e-13,3;UBERON:0000946,3.49e-13,3;UBERON:0002523,3.49e-13,3;UBERON:0005983,3.49e-13,3;UBERON:0002165,3.49e-13,3;UBERON:0002062,3.49e-13,3;UBERON:0007280,3.49e-13,3;UBERON:0005090,1.54e-09,2;UBERON:0001630,1.54e-09,2;UBERON:0000948,1.57e-09,24;UBERON:0005498,1.57e-09,24;UBERON:0004140,1.57e-09,24;UBERON:0009881,1.57e-09,24;UBERON:0004141,1.57e-09,24;UBERON:0003084,1.57e-09,24;UBERON:0007005,1.57e-09,24;UBERON:0004139,1.57e-09,24;UBERON:0004291,1.57e-09,24;UBERON:0002081,2.62e-09,2;UBERON:0010227,2.62e-09,2;UBERON:0002133,2.95e-09,2;UBERON:0000341,3.92e-09,2;UBERON:0001829,5.40e-09,2;UBERON:0003127,6.59e-09,2 | |||
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| ||
|short_description=p1@MB | |short_description=p1@MB | ||
}} | }} |
Latest revision as of 00:41, 20 September 2015
Short description: | p1@MB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MB_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000442617, ENST00000453997, NM_005368, uc003anz.2_5end |
EntrezGene: | MB |
HGNC: | 6915 |
UniProt: | B0QYF7B4DUI1P02144 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.22e-24 | 114 |
compound organ | 9.90e-17 | 68 |
primary circulatory organ | 3.50e-16 | 27 |
cardiac chamber | 2.74e-13 | 3 |
valve | 3.49e-13 | 3 |
cardiac mesenchyme | 3.49e-13 | 3 |
cardial valve | 3.49e-13 | 3 |
tunica intima | 3.49e-13 | 3 |
heart layer | 3.49e-13 | 3 |
endocardium | 3.49e-13 | 3 |
endocardial cushion | 3.49e-13 | 3 |
presumptive endocardium | 3.49e-13 | 3 |
muscle structure | 1.54e-09 | 2 |
muscle organ | 1.54e-09 | 2 |
heart | 1.57e-09 | 24 |
primitive heart tube | 1.57e-09 | 24 |
primary heart field | 1.57e-09 | 24 |
anterior lateral plate mesoderm | 1.57e-09 | 24 |
heart tube | 1.57e-09 | 24 |
heart primordium | 1.57e-09 | 24 |
cardiac mesoderm | 1.57e-09 | 24 |
cardiogenic plate | 1.57e-09 | 24 |
heart rudiment | 1.57e-09 | 24 |
cardiac atrium | 2.62e-09 | 2 |
future cardiac atrium | 2.62e-09 | 2 |
atrioventricular valve | 2.95e-09 | 2 |
throat | 3.92e-09 | 2 |
major salivary gland | 5.40e-09 | 2 |
open tracheal system trachea | 6.59e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.25e-09 | 2 |