FFCP PHASE1:Hg19::chr21:46494466..46494543,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=104 | |EntrezGene=104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=226 | |HGNC=226 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TCX7,G5E9B4,Q4AE81,F5H398,P78563,Q4AE77 | |UniProt=Q8TCX7,G5E9B4,Q4AE81,F5H398,P78563,Q4AE77 | ||
|association_with_transcript=0bp_to_ENST00000327861,ENST00000348831,ENST00000389861,ENST00000389863,ENST00000437626,ENST00000460734,ENST00000492414,ENST00000496664,ENST00000539173,ENST00000539917,NM_001112,NM_001160230,NM_015833,NM_015834,NR_027672,NR_027673,NR_027674,uc002zgp.2,uc002zgq.2,uc002zgr.2,uc002zgs.2,uc002zgt.2,uc002zgu.2,uc002zgv.2,uc002zgw.2,uc002zgy.2,uc010gpx.2_5end | |association_with_transcript=0bp_to_ENST00000327861,ENST00000348831,ENST00000389861,ENST00000389863,ENST00000437626,ENST00000460734,ENST00000492414,ENST00000496664,ENST00000539173,ENST00000539917,NM_001112,NM_001160230,NM_015833,NM_015834,NR_027672,NR_027673,NR_027674,uc002zgp.2,uc002zgq.2,uc002zgr.2,uc002zgs.2,uc002zgt.2,uc002zgu.2,uc002zgv.2,uc002zgw.2,uc002zgy.2,uc010gpx.2_5end | ||
|cluster_id=chr21:46494466..46494543,+ | |||
|description=CAGE_peak_1_at_ADARB1_5end | |description=CAGE_peak_1_at_ADARB1_5end | ||
|id=chr21:46494466..46494543,+ | |id=chr21:46494466..46494543,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.69e-12!115;UBERON:0003075!1.69e-09!86;UBERON:0007284!1.69e-09!86;UBERON:0002616!2.56e-09!59;UBERON:0002346!3.04e-09!90;UBERON:0000955!5.64e-09!69;UBERON:0006238!5.64e-09!69;UBERON:0003056!1.80e-07!61;UBERON:0001049!2.17e-07!57;UBERON:0005068!2.17e-07!57;UBERON:0006241!2.17e-07!57;UBERON:0007135!2.17e-07!57;UBERON:0001017!7.01e-07!82;UBERON:0000153!9.22e-07!129;UBERON:0007811!9.22e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!6.69e-12!115;UBERON:0003075!1.69e-09!86;UBERON:0007284!1.69e-09!86;UBERON:0002616!2.56e-09!59;UBERON:0002346!3.04e-09!90;UBERON:0000955!5.64e-09!69;UBERON:0006238!5.64e-09!69;UBERON:0003056!1.80e-07!61;UBERON:0001049!2.17e-07!57;UBERON:0005068!2.17e-07!57;UBERON:0006241!2.17e-07!57;UBERON:0007135!2.17e-07!57;UBERON:0001017!7.01e-07!82;UBERON:0000153!9.22e-07!129;UBERON:0007811!9.22e-07!129 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.23e-11,114;UBERON:0010371,7.74e-09,104;UBERON:0003075,9.27e-09,82;UBERON:0007284,9.27e-09,82;UBERON:0000955,1.01e-08,68;UBERON:0006238,1.01e-08,68;UBERON:0002346,1.62e-08,86;UBERON:0003056,2.61e-07,61;UBERON:0000073,2.96e-07,53;UBERON:0002616,2.96e-07,53;UBERON:0001049,3.83e-07,56;UBERON:0005068,3.83e-07,56;UBERON:0006241,3.83e-07,56;UBERON:0007135,3.83e-07,56 | |||
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| ||
|short_description=p1@ADARB1 | |short_description=p1@ADARB1 | ||
}} | }} |
Latest revision as of 20:25, 18 September 2015
Short description: | p1@ADARB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADARB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000327861, ENST00000348831, ENST00000389861, ENST00000389863, ENST00000437626, ENST00000460734, ENST00000492414, ENST00000496664, ENST00000539173, ENST00000539917, NM_001112, NM_001160230, NM_015833, NM_015834, NR_027672, NR_027673, NR_027674, uc002zgp.2, uc002zgq.2, uc002zgr.2, uc002zgs.2, uc002zgt.2, uc002zgu.2, uc002zgv.2, uc002zgw.2, uc002zgy.2, uc010gpx.2_5end |
EntrezGene: | ADARB1 |
HGNC: | 226 |
UniProt: | Q8TCX7G5E9B4Q4AE81F5H398P78563Q4AE77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.23e-11 | 114 |
ecto-epithelium | 7.74e-09 | 104 |
neural plate | 9.27e-09 | 82 |
presumptive neural plate | 9.27e-09 | 82 |
brain | 1.01e-08 | 68 |
future brain | 1.01e-08 | 68 |
neurectoderm | 1.62e-08 | 86 |
pre-chordal neural plate | 2.61e-07 | 61 |
regional part of nervous system | 2.96e-07 | 53 |
regional part of brain | 2.96e-07 | 53 |
neural tube | 3.83e-07 | 56 |
neural rod | 3.83e-07 | 56 |
future spinal cord | 3.83e-07 | 56 |
neural keel | 3.83e-07 | 56 |