FFCP PHASE1:Hg19::chr17:61988610..61988623,-: Difference between revisions
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|id=chr17:61988610..61988623,-
|short_description=p1@CSHL1
|description=CAGE_peak_1_at_CSHL1_5end
|association_with_transcript=0bp_to_ENST00000309894,ENST0000034660...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1444 | |EntrezGene=1444 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2442 | |HGNC=2442 | ||
|TSSclassifier=strong | |||
|UniProt=Q14406 | |UniProt=Q14406 | ||
|association_with_transcript=0bp_to_ENST00000309894,ENST00000346606,ENST00000438387,NM_001318,NM_022579,NM_022580,NM_022581,uc002jcz.1,uc002jda.1,uc002jdb.1,uc002jdc.1,uc002jdd.1,uc002jdf.2,uc002jdg.2,uc002jdh.2_5end | |||
|cluster_id=chr17:61988610..61988623,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_CSHL1_5end | |||
|id=chr17:61988610..61988623,- | |||
|ontology_enrichment_celltype=CL:0000039!2.52e-07!7;CL:0000586!2.52e-07!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.84e-34;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!1.26e-23!2;UBERON:0003124!6.10e-15!7;UBERON:0002146!1.96e-12!1;UBERON:0005623!1.96e-12!1;UBERON:0007190!2.20e-12!1;UBERON:0001987!2.61e-12!4;UBERON:0003296!2.61e-12!4;UBERON:0010133!2.61e-12!4;UBERON:0004340!2.61e-12!4;UBERON:0002336!4.81e-12!1;UBERON:0001018!4.81e-12!1;UBERON:0002473!4.81e-12!1;UBERON:0005340!4.81e-12!1;UBERON:0002316!4.81e-12!1;UBERON:0003544!4.81e-12!1;UBERON:0001020!4.81e-12!1;UBERON:0005970!4.81e-12!1;UBERON:0002437!4.81e-12!1;UBERON:0005631!9.68e-08!14;UBERON:0000158!9.68e-08!14;UBERON:0001894!2.09e-07!7;UBERON:0006222!2.09e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.53e-66;2!UBERON:0003296;1.17e-33;4!UBERON:0010133;1.17e-33;4!UBERON:0001894;9.49e-20;7!UBERON:0001987;1.12e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.53e-66,2;UBERON:0003296,1.17e-33,4;UBERON:0010133,1.17e-33,4;UBERON:0001894,9.49e-20,7;UBERON:0006222,9.49e-20,7;UBERON:0001987,1.12e-09,4;UBERON:0004340,1.12e-09,4 | |||
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|short_description=p1@CSHL1 | |||
}} | }} |
Latest revision as of 18:38, 16 September 2015
Short description: | p1@CSHL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSHL1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000309894, ENST00000346606, ENST00000438387, NM_001318, NM_022579, NM_022580, NM_022581, uc002jcz.1, uc002jda.1, uc002jdb.1, uc002jdc.1, uc002jdd.1, uc002jdf.2, uc002jdg.2, uc002jdh.2_5end |
EntrezGene: | CSHL1 |
HGNC: | 2442 |
UniProt: | Q14406 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.53e-66 | 2 |
gland of diencephalon | 1.17e-33 | 4 |
neuroendocrine gland | 1.17e-33 | 4 |
diencephalon | 9.49e-20 | 7 |
future diencephalon | 9.49e-20 | 7 |
placenta | 1.12e-09 | 4 |
allantois | 1.12e-09 | 4 |