FFCP PHASE1:Hg19::chr20:4706800..4706803,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:4706800..4706803,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr20:4706800..4706803,+ | |description=CAGE_peak_at_chr20:4706800..4706803,+ | ||
|id=chr20:4706800..4706803,+ | |id=chr20:4706800..4706803,+ | ||
|ontology_enrichment_celltype=CL:0002139!5.76e-08!24 | |ontology_enrichment_celltype=CL:0002139!5.76e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0002545;7.40e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002545,7.61e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4074;5.11e-07;2!DOID:4905;5.11e-07;2!DOID:3498;5.11e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,5.11e-07,2;DOID:4905,5.11e-07,2;DOID:3498,5.11e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001896!2.36e-10!3;UBERON:0005290!2.36e-10!3;UBERON:0010096!2.36e-10!3 | |ontology_enrichment_uberon=UBERON:0001896!2.36e-10!3;UBERON:0005290!2.36e-10!3;UBERON:0010096!2.36e-10!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002050;2.35e-20;5!UBERON:0005423;2.35e-20;5!UBERON:0000922;1.59e-13;49!UBERON:0007029;9.92e-13;1!UBERON:0005795;3.26e-12;1!UBERON:0002426;3.26e-12;1!UBERON:0003831;3.26e-12;1!UBERON:0003898;3.26e-12;1!UBERON:0004830;3.26e-12;1!UBERON:0003830;3.26e-12;1!UBERON:0005175;3.26e-12;1!UBERON:0001774;3.26e-12;1!UBERON:0001103;3.26e-12;1!UBERON:0002346;5.10e-12;4!UBERON:0000923;5.10e-12;4!UBERON:0010316;5.10e-12;4!UBERON:0005291;5.10e-12;4!UBERON:0005800;7.40e-07;2!UBERON:0001515;7.40e-07;2!UBERON:0003127;9.81e-07;2!UBERON:0000341;9.81e-07;2!UBERON:0005090;9.81e-07;2!UBERON:0001630;9.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,9.92e-13,1;UBERON:0002426,3.08e-12,1;UBERON:0003831,3.08e-12,1;UBERON:0003898,3.08e-12,1;UBERON:0004830,3.08e-12,1;UBERON:0003830,3.08e-12,1;UBERON:0005175,3.08e-12,1;UBERON:0001774,3.08e-12,1;UBERON:0001103,3.08e-12,1;UBERON:0010084,3.08e-12,1;UBERON:0005800,7.61e-07,2;UBERON:0001515,7.61e-07,2;UBERON:0000341,8.52e-07,2;UBERON:0003127,9.02e-07,2;UBERON:0005090,9.54e-07,2;UBERON:0001630,9.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0,0,0,0,0,0,4.32230949142452,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,1.37559020970034,0.208994966536811,0.258416759169329,0,0.66944122552934,0,0,0.24406205754817,0,2.43042584364528,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,1.60515529459758,0,0,0,9.9539955608978,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,1.14681839138014,0.110929051536852,0.0620964029413835,0.276697269872462,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.425149840203366,1.73510069962603,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,4.57265235335014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6392577253528,8.74279787506451,0,0,0,0.11294608203896,0,0,0,0.874238242015829,0,0,0,0,0,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,11.2152473362994,19.2934173712448,0,0,0,1.66645102024618,0,0.248298857183432,0,0,0.404234377916439,0,4.79126621519393,0.0673520530145875,0,1.66330178273007,0,0,0,0,0,0.366724332548599,1.22068853494722,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0,0,0,0,0,0,4.32230949142452,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,1.37559020970034,0.208994966536811,0.258416759169329,0,0.66944122552934,0,0,0.24406205754817,0,2.43042584364528,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,1.60515529459758,0,0,0,9.9539955608978,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,1.14681839138014,0.110929051536852,0.0620964029413835,0.276697269872462,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.425149840203366,1.73510069962603,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,4.57265235335014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6392577253528,8.74279787506451,0,0,0,0.11294608203896,0,0,0,0.874238242015829,0,0,0,0,0,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,11.2152473362994,19.2934173712448,0,0,0,1.66645102024618,0,0.248298857183432,0,0,0.404234377916439,0,4.79126621519393,0.0673520530145875,0,1.66330178273007,0,0,0,0,0,0.366724332548599,1.22068853494722,0,0,0 | ||
|short_description=p@chr20:4706800..4706803,+ | |short_description=p@chr20:4706800..4706803,+ | ||
}} | }} |
Latest revision as of 14:52, 28 July 2015
Short description: | p@chr20:4706800..4706803, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4706800..4706803, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic aorta endothelial cell | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
surface | 9.92e-13 | 1 |
chest muscle | 3.08e-12 | 1 |
respiratory system muscle | 3.08e-12 | 1 |
skeletal muscle of trunk | 3.08e-12 | 1 |
respiratory system skeletal muscle | 3.08e-12 | 1 |
thoracic segment muscle | 3.08e-12 | 1 |
chest organ | 3.08e-12 | 1 |
muscle of trunk | 3.08e-12 | 1 |
diaphragm | 3.08e-12 | 1 |
future diaphragm | 3.08e-12 | 1 |
segment of aorta | 7.61e-07 | 2 |
thoracic aorta | 7.61e-07 | 2 |
throat | 8.52e-07 | 2 |
open tracheal system trachea | 9.02e-07 | 2 |
muscle structure | 9.54e-07 | 2 |
muscle organ | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 5.11e-07 | 2 |
pancreatic carcinoma | 5.11e-07 | 2 |
pancreatic ductal adenocarcinoma | 5.11e-07 | 2 |