FFCP PHASE1:Hg19::chr20:21538183..21538198,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:21538183..21538198,+ | |||
|coexpression_cluster_id=C1865 | |||
|description=CAGE_peak_at_chr20:21538183..21538198,+ | |description=CAGE_peak_at_chr20:21538183..21538198,+ | ||
|id=chr20:21538183..21538198,+ | |id=chr20:21538183..21538198,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.86e-32!18;CL:0000789!1.86e-32!18;CL:0002420!1.86e-32!18;CL:0002419!1.86e-32!18;CL:0000790!1.86e-32!18;CL:0000084!1.76e-26!25;CL:0000827!1.76e-26!25;CL:0000838!3.74e-21!52;CL:0000542!1.15e-20!53;CL:0000051!1.15e-20!53;CL:0000624!2.85e-16!6;CL:0000080!6.82e-16!6;CL:0000625!2.02e-15!11;CL:0000898!1.24e-12!3;CL:0002087!1.69e-09!119;CL:0000815!3.18e-09!2;CL:0000792!3.18e-09!2;CL:0002677!3.18e-09!2;CL:0000893!1.55e-08!2;CL:0002489!1.55e-08!2;CL:0000809!1.55e-08!2;CL:0000808!1.55e-08!2;CL:0000894!1.55e-08!2;CL:0000806!1.55e-08!2;CL:0000807!1.55e-08!2;CL:0000805!1.55e-08!2;CL:0002425!1.55e-08!2;CL:0000738!3.03e-08!140;CL:0000988!1.90e-07!182;CL:0002031!4.52e-07!124 | |ontology_enrichment_celltype=CL:0000791!1.86e-32!18;CL:0000789!1.86e-32!18;CL:0002420!1.86e-32!18;CL:0002419!1.86e-32!18;CL:0000790!1.86e-32!18;CL:0000084!1.76e-26!25;CL:0000827!1.76e-26!25;CL:0000838!3.74e-21!52;CL:0000542!1.15e-20!53;CL:0000051!1.15e-20!53;CL:0000624!2.85e-16!6;CL:0000080!6.82e-16!6;CL:0000625!2.02e-15!11;CL:0000898!1.24e-12!3;CL:0002087!1.69e-09!119;CL:0000815!3.18e-09!2;CL:0000792!3.18e-09!2;CL:0002677!3.18e-09!2;CL:0000893!1.55e-08!2;CL:0002489!1.55e-08!2;CL:0000809!1.55e-08!2;CL:0000808!1.55e-08!2;CL:0000894!1.55e-08!2;CL:0000806!1.55e-08!2;CL:0000807!1.55e-08!2;CL:0000805!1.55e-08!2;CL:0002425!1.55e-08!2;CL:0000738!3.03e-08!140;CL:0000988!1.90e-07!182;CL:0002031!4.52e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000815;2.56e-22;2!CL:0000792;2.56e-22;2!CL:0002677;2.56e-22;2!CL:0000898;3.22e-15;3!CL:0000624;4.66e-08;6!CL:0000084;5.12e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.85e-22,2;CL:0000792,1.85e-22,2;CL:0002677,1.85e-22,2;CL:0000898,2.60e-15,3;CL:0000624,4.19e-08,6;CL:0000084,5.08e-07,25;CL:0000827,5.08e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.12e-19!15;UBERON:0000179!7.12e-19!15;UBERON:0000463!7.12e-19!15 | |ontology_enrichment_uberon=UBERON:0000178!7.12e-19!15;UBERON:0000179!7.12e-19!15;UBERON:0000463!7.12e-19!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.91e-11;15!UBERON:0000179;1.91e-11;15!UBERON:0000463;1.91e-11;15!UBERON:0002331;4.05e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.86e-11,15;UBERON:0000179,1.86e-11,15;UBERON:0000463,1.86e-11,15;UBERON:0002331,3.87e-10,10;UBERON:0000358,3.87e-10,10;UBERON:0000307,3.87e-10,10;UBERON:0000091,3.87e-10,10;UBERON:0000087,3.87e-10,10;UBERON:0007010,3.87e-10,10;UBERON:0007806,3.87e-10,10;UBERON:0008780,3.87e-10,10;UBERON:0005728,3.87e-10,10 | |||
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| ||
|short_description=p@chr20:21538183..21538198,+ | |short_description=p@chr20:21538183..21538198,+ | ||
}} | }} |
Latest revision as of 12:24, 28 July 2015
Short description: | p@chr20:21538183..21538198, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:21538183..21538198, + |
Coexpression cluster: | C1865_adult_CD4_CD8_cord_lymphangiectasia_B_xeroderma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.85e-22 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.85e-22 | 2 |
naive regulatory T cell | 1.85e-22 | 2 |
naive T cell | 2.60e-15 | 3 |
CD4-positive, alpha-beta T cell | 4.19e-08 | 6 |
T cell | 5.08e-07 | 25 |
pro-T cell | 5.08e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
blood | 1.86e-11 | 15 |
haemolymphatic fluid | 1.86e-11 | 15 |
organism substance | 1.86e-11 | 15 |
umbilical cord | 3.87e-10 | 10 |
blastocyst | 3.87e-10 | 10 |
blastula | 3.87e-10 | 10 |
bilaminar disc | 3.87e-10 | 10 |
inner cell mass | 3.87e-10 | 10 |
cleaving embryo | 3.87e-10 | 10 |
connecting stalk | 3.87e-10 | 10 |
inner cell mass derived epiblast | 3.87e-10 | 10 |
extraembryonic mesoderm | 3.87e-10 | 10 |