FFCP PHASE1:Hg19::chr1:93812261..93812303,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1810 | |EntrezGene=1810 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3017 | |HGNC=3017 | ||
|TSSclassifier=strong | |||
|UniProt=Q01658 | |UniProt=Q01658 | ||
|association_with_transcript=58bp_to_AB384804,BT006972,CU678212_5end | |association_with_transcript=58bp_to_AB384804,BT006972,CU678212_5end | ||
|cluster_id=chr1:93812261..93812303,+ | |||
|coexpression_cluster_id=C1390 | |||
|description=CAGE_peak_2_at_DR1_5end | |description=CAGE_peak_2_at_DR1_5end | ||
|id=chr1:93812261..93812303,+ | |id=chr1:93812261..93812303,+ | ||
|ontology_enrichment_celltype=CL:0000037!4.24e-13!172;CL:0000566!4.24e-13!172;CL:0002032!7.25e-13!165;CL:0000837!7.25e-13!165;CL:0000988!2.87e-12!182;CL:0000738!4.54e-12!140;CL:0002031!5.93e-12!124;CL:0000763!3.96e-10!112;CL:0000049!3.96e-10!112;CL:0002087!3.46e-09!119;CL:0000839!5.52e-09!70;CL:0000766!8.05e-09!76;CL:0000557!1.38e-08!71;CL:0000860!3.51e-07!45;CL:0002009!4.11e-07!65;CL:0002057!5.75e-07!42 | |ontology_enrichment_celltype=CL:0000037!4.24e-13!172;CL:0000566!4.24e-13!172;CL:0002032!7.25e-13!165;CL:0000837!7.25e-13!165;CL:0000988!2.87e-12!182;CL:0000738!4.54e-12!140;CL:0002031!5.93e-12!124;CL:0000763!3.96e-10!112;CL:0000049!3.96e-10!112;CL:0002087!3.46e-09!119;CL:0000839!5.52e-09!70;CL:0000766!8.05e-09!76;CL:0000557!1.38e-08!71;CL:0000860!3.51e-07!45;CL:0002009!4.11e-07!65;CL:0002057!5.75e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.17e-08;3!CL:0000097;1.82e-08;5!CL:0000767;2.00e-07;3!CL:0000860;2.86e-07;33!CL:0002057;2.86e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,1.16e-18,161;CL:0000837,1.16e-18,161;CL:0000037,1.99e-18,168;CL:0002031,4.44e-18,120;CL:0000738,5.11e-18,136;CL:0000988,7.37e-18,177;CL:0000763,1.31e-13,108;CL:0000049,1.31e-13,108;CL:0000766,2.37e-12,72;CL:0000839,1.92e-11,66;CL:0000557,2.82e-11,67;CL:0002087,4.75e-11,115;CL:0000860,4.26e-09,42;CL:0002057,4.26e-09,42;CL:0000473,1.07e-08,48;CL:0000234,1.07e-08,48;CL:0000623,1.20e-08,3;CL:0000825,1.20e-08,3;CL:0000097,1.74e-08,5;CL:0002028,1.74e-08,5;CL:0000767,5.58e-08,3;CL:0002009,7.09e-08,61;CL:0000134,4.62e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;4.35e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.30e-11!102;UBERON:0003061!4.30e-11!102;UBERON:0002193!1.58e-08!112;UBERON:0002371!9.18e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!4.30e-11!102;UBERON:0003061!4.30e-11!102;UBERON:0002193!1.58e-08!112;UBERON:0002371!9.18e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.29e-10;15!UBERON:0000179;2.29e-10;15!UBERON:0000463;2.29e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.66e-16,98;UBERON:0003061,9.66e-16,98;UBERON:0002193,1.80e-13,108;UBERON:0000178,4.87e-11,15;UBERON:0000179,4.87e-11,15;UBERON:0000463,4.87e-11,15;UBERON:0002371,2.87e-09,76;UBERON:0001474,3.46e-08,82;UBERON:0002405,2.28e-07,93;UBERON:0004765,5.50e-07,90 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0.631719873426831,0,0,0,0,0.263766978228454,0,0.662794751455832,0.672325146451775,1.20538905604795,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0.85870796139317,0.684372125364421,0.251085279189606,0.458480434487708,0.328402357799783,0.236132343941038,1.96682138424452,6.1412703695554,1.85779347979291,0,0,0.369754010166788,0.154934401160603,0.142169232487422,0.293600439334847,1.66198622559563,1.40381113229099,1.08505435357926,0.895661896959697,0,0,1.01778767145695,0,0.727752183563449,0.697287110717054,0.411167888021826,2.47765096716083,1.1507695692886,1.5369642391746,1.89185783910868,1.03423704220986,0.645484683583826,0,1.12945403725563,0.545812300115692,1.57306439111559,0.612167784741805,0.641858054152187,0,0.659702600373432,0.797854630486527,0,0.870627715885752,0,1.24564449799115,1.7587406567972,1.5644487552606,1.52032191293582,0,2.57794345191295,0.632924774881769,0.633765858935825,0.850417199860174,0,0.336985893439485,0.150176892841506,0.32145117339416,0,0.59675003159727,0,0,0,0,0,0,0,0,0,3.41527781465669,2.93618594685469,1.14681968437569,5.28685314316103,10.6496626966492,0,1.57367816091066,1.17903228824749,1.23360899399706,0.501559486172034,0.32592226663359,0,0,0.222820913770347,0.589211814949674,0.443067789167242,0.270803863765016,0.768547918354051,1.56071217071854,0.657751618414705,1.38175008892924,0.579606171470105,0.14828656316206,0.535081656179426,1.04535523804977,0.453237370790265,1.53288197440768,0.68725489096526,1.51811815211702,0,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,5.24177532384304,6.15112450302067,4.19990771260117,0,0,0.255725123687061,0.722878304769133,0,0.434539556882471,0,0,0.189069634328136,0.665188192387692,0.351339142772504,0.327447688744282,0,0,0,0.522389211897802,0.398873881556595,0.715471872916026,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0.66944122552934,0,0,0,0,0,0.357198913136319,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,1.01304409331664,0,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0.326923806226917,0,0.576175924479999,0,0.624320153660641,0,0.747243402759005,0.352303495931295,0,0,0,0.491337269247072,0.206651562351531,0,0.247266929278557,0,0,0.336672227908132,0.500474079487857,0.277064115484183,0,0.30648779579902,0.150238058906597,0.226864366320042,0.538168907066586,0.85422955527427,0,0,0.515262646192195,0,0,0.168776332241266,0.487185025805993,0,0.736399189138395,0.161646056818812,0.710019185033229,0.503760491138201,0.169560592310488,0,0.272746120590835,0.286804595389004,0.731842236777572,0.265059536642971,0.348581828608555,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0.828147600278907,1.18009283054671,0.241011029883482,0.992645754591546,0.871517776369625,0.474541238222193,0.539325232640658,0.588664395376038,0.769494313892781,0,0,0,0,1.26755034821831,0.982827216677626,0,0.882926198829301,0.122988438543114,0.171567810298526,0.439001141634502,0,0.100528972411631,0.370353780634118,0.651616610620649,0,1.44331342025273,0.231860809950154,0,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,0.445893486866185,0,0.503946384596579,0.141775097242386,0.53735113621709,0,0.383382679165211,25.6184883705891,6.4275356829655,3.31724984865235,2.73827911492227,0.50496973370552,0.571481048629521,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0.258543431515556,0,1.690605505112,0.531876233169741,1.04007436911366,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.399891964728228,0,0,2.10833939483032,0.718874566474748,0,0,0.723906533337896,0.205476322550383,0,0.448340575974109,9.06341496928865,9.05635814409973,9.24069861214188,0.254094624222463,0,0,0.167516265334349,0.637938751653163,1.49801404789436,0,0.828831026872071,0.49076596687656,0.500170521059677,0,0,0.892144943985809,0.315404830067869,0.35142424497814,0,0,0,1.32845119707087,0.184369168541703,0.173767228936166,0,0.686286847621712,0.206768026122887,1.94142780736755,0.640365346820666,0,0,0.604780586659361,0,0,0.280660094433074,0,0.511707249066704,0.321707842287215,0,1.3878872442239,0.177561725313127,0.328508624055237,0.519254429183621,0.116210378459959,0,0.40101294060657,0.552485933615378,0.114814448164607,0.910455840033585,0.786746489756545,0,0.0770153371044148,0.784349769176855,1.46139224653261,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,2.19259876645935,2.3529190592241,0,0,0,0,0.54941678891006,0.247528499761764,0,0.650060246036521,0,0.48335359146061,0.616194468458578,0.614014698904518,0.137836572484531,0.214840489736547,0.145016693914229,0.170453254832202,0.0890320356467374,0.661139661443912,0.384380134730212,0,0.4046311234222,0.929691098594572,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0,0.286249773483982,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0.235624804691373,0.404364963146632,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0.551365343546124,0,0.876901770507525,0,0,0,0.30982349809975,0.281695602532241,0.14341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|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0.631719873426831,0,0,0,0,0.263766978228454,0,0.662794751455832,0.672325146451775,1.20538905604795,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0.85870796139317,0.684372125364421,0.251085279189606,0.458480434487708,0.328402357799783,0.236132343941038,1.96682138424452,6.1412703695554,1.85779347979291,0,0,0.369754010166788,0.154934401160603,0.142169232487422,0.293600439334847,1.66198622559563,1.40381113229099,1.08505435357926,0.895661896959697,0,0,1.01778767145695,0,0.727752183563449,0.697287110717054,0.411167888021826,2.47765096716083,1.1507695692886,1.5369642391746,1.89185783910868,1.03423704220986,0.645484683583826,0,1.12945403725563,0.545812300115692,1.57306439111559,0.612167784741805,0.641858054152187,0,0.659702600373432,0.797854630486527,0,0.870627715885752,0,1.24564449799115,1.7587406567972,1.5644487552606,1.52032191293582,0,2.57794345191295,0.632924774881769,0.633765858935825,0.850417199860174,0,0.336985893439485,0.150176892841506,0.32145117339416,0,0.59675003159727,0,0,0,0,0,0,0,0,0,3.41527781465669,2.93618594685469,1.14681968437569,5.28685314316103,10.6496626966492,0,1.57367816091066,1.17903228824749,1.23360899399706,0.501559486172034,0.32592226663359,0,0,0.222820913770347,0.589211814949674,0.443067789167242,0.270803863765016,0.768547918354051,1.56071217071854,0.657751618414705,1.38175008892924,0.579606171470105,0.14828656316206,0.535081656179426,1.04535523804977,0.453237370790265,1.53288197440768,0.68725489096526,1.51811815211702,0,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,5.24177532384304,6.15112450302067,4.19990771260117,0,0,0.255725123687061,0.722878304769133,0,0.434539556882471,0,0,0.189069634328136,0.665188192387692,0.351339142772504,0.327447688744282,0,0,0,0.522389211897802,0.398873881556595,0.715471872916026,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0.66944122552934,0,0,0,0,0,0.357198913136319,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,1.01304409331664,0,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0.326923806226917,0,0.576175924479999,0,0.624320153660641,0,0.747243402759005,0.352303495931295,0,0,0,0.491337269247072,0.206651562351531,0,0.247266929278557,0,0,0.336672227908132,0.500474079487857,0.277064115484183,0,0.30648779579902,0.150238058906597,0.226864366320042,0.538168907066586,0.85422955527427,0,0,0.515262646192195,0,0,0.168776332241266,0.487185025805993,0,0.736399189138395,0.161646056818812,0.710019185033229,0.503760491138201,0.169560592310488,0,0.272746120590835,0.286804595389004,0.731842236777572,0.265059536642971,0.348581828608555,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0.828147600278907,1.18009283054671,0.241011029883482,0.992645754591546,0.871517776369625,0.474541238222193,0.539325232640658,0.588664395376038,0.769494313892781,0,0,0,0,1.26755034821831,0.982827216677626,0,0.882926198829301,0.122988438543114,0.171567810298526,0.439001141634502,0,0.100528972411631,0.370353780634118,0.651616610620649,0,1.44331342025273,0.231860809950154,0,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,0.445893486866185,0,0.503946384596579,0.141775097242386,0.53735113621709,0,0.383382679165211,25.6184883705891,6.4275356829655,3.31724984865235,2.73827911492227,0.50496973370552,0.571481048629521,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0.258543431515556,0,1.690605505112,0.531876233169741,1.04007436911366,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.399891964728228,0,0,2.10833939483032,0.718874566474748,0,0,0.723906533337896,0.205476322550383,0,0.448340575974109,9.06341496928865,9.05635814409973,9.24069861214188,0.254094624222463,0,0,0.167516265334349,0.637938751653163,1.49801404789436,0,0.828831026872071,0.49076596687656,0.500170521059677,0,0,0.892144943985809,0.315404830067869,0.35142424497814,0,0,0,1.32845119707087,0.184369168541703,0.173767228936166,0,0.686286847621712,0.206768026122887,1.94142780736755,0.640365346820666,0,0,0.604780586659361,0,0,0.280660094433074,0,0.511707249066704,0.321707842287215,0,1.3878872442239,0.177561725313127,0.328508624055237,0.519254429183621,0.116210378459959,0,0.40101294060657,0.552485933615378,0.114814448164607,0.910455840033585,0.786746489756545,0,0.0770153371044148,0.784349769176855,1.46139224653261,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,2.19259876645935,2.3529190592241,0,0,0,0,0.54941678891006,0.247528499761764,0,0.650060246036521,0,0.48335359146061,0.616194468458578,0.614014698904518,0.137836572484531,0.214840489736547,0.145016693914229,0.170453254832202,0.0890320356467374,0.661139661443912,0.384380134730212,0,0.4046311234222,0.929691098594572,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0,0.286249773483982,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0.235624804691373,0.404364963146632,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0.551365343546124,0,0.876901770507525,0,0,0,0.30982349809975,0.281695602532241,0.14341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| ||
|short_description=p2@DR1 | |short_description=p2@DR1 | ||
}} | }} |
Latest revision as of 21:38, 19 September 2015
Short description: | p2@DR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DR1_5end |
Coexpression cluster: | C1390_Mast_CD8_Natural_Basophils_CD34_CD4_CD19 |
Association with transcript: | 58bp_to_AB384804, BT006972, CU678212_5end |
EntrezGene: | DR1 |
HGNC: | 3017 |
UniProt: | Q01658 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 1.16e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-18 | 161 |
hematopoietic stem cell | 1.99e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 4.44e-18 | 120 |
leukocyte | 5.11e-18 | 136 |
hematopoietic cell | 7.37e-18 | 177 |
myeloid cell | 1.31e-13 | 108 |
common myeloid progenitor | 1.31e-13 | 108 |
myeloid leukocyte | 2.37e-12 | 72 |
myeloid lineage restricted progenitor cell | 1.92e-11 | 66 |
granulocyte monocyte progenitor cell | 2.82e-11 | 67 |
nongranular leukocyte | 4.75e-11 | 115 |
classical monocyte | 4.26e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.26e-09 | 42 |
defensive cell | 1.07e-08 | 48 |
phagocyte | 1.07e-08 | 48 |
natural killer cell | 1.20e-08 | 3 |
pro-NK cell | 1.20e-08 | 3 |
mast cell | 1.74e-08 | 5 |
basophil mast progenitor cell | 1.74e-08 | 5 |
basophil | 5.58e-08 | 3 |
macrophage dendritic cell progenitor | 7.09e-08 | 61 |
mesenchymal cell | 4.62e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.66e-16 | 98 |
blood island | 9.66e-16 | 98 |
hemolymphoid system | 1.80e-13 | 108 |
blood | 4.87e-11 | 15 |
haemolymphatic fluid | 4.87e-11 | 15 |
organism substance | 4.87e-11 | 15 |
bone marrow | 2.87e-09 | 76 |
bone element | 3.46e-08 | 82 |
immune system | 2.28e-07 | 93 |
skeletal element | 5.50e-07 | 90 |