FFCP PHASE1:Hg19::chr1:31842256..31842273,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:31842256..31842273,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr1:31842256..31842273,+ | |description=CAGE_peak_at_chr1:31842256..31842273,+ | ||
|id=chr1:31842256..31842273,+ | |id=chr1:31842256..31842273,+ | ||
|ontology_enrichment_celltype=CL:0002551!1.52e-07!6;CL:0000055!2.48e-07!180 | |ontology_enrichment_celltype=CL:0002551!1.52e-07!6;CL:0000055!2.48e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002590;7.76e-18;3!CL:0002504;2.89e-17;3!CL:1000279;2.89e-17;3!CL:1000280;2.89e-17;3!CL:0000840;6.75e-09;5!CL:0002581;2.16e-07;1!CL:0002601;7.08e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002590,8.98e-18,3;CL:0002504,2.00e-17,3;CL:1000279,2.00e-17,3;CL:1000280,2.00e-17,3;CL:0000840,5.97e-09,5;CL:0001029,5.97e-09,5;CL:0002581,2.23e-07,1;CL:0000192,2.82e-07,43;CL:0000514,2.82e-07,43;CL:0000187,7.59e-07,55 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.75e-07;1!UBERON:0010227;1.86e-07;1!UBERON:0004140;7.08e-07;1!UBERON:0005062;9.47e-07;4!UBERON:0007284;9.47e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.35e-12;2!DOID:178;7.08e-07;1!DOID:326;7.08e-07;1!DOID:3978;7.08e-07;1!DOID:3394;7.08e-07;1!DOID:5844;7.08e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.07e-12,2;DOID:178,5.14e-07,1;DOID:326,5.14e-07,1;DOID:3978,5.14e-07,1;DOID:3394,5.14e-07,1;DOID:5844,5.14e-07,1;DOID:1287,9.21e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000922!5.52e-10!612;UBERON:0000468!6.16e-10!659;UBERON:0000914!8.64e-09!83;UBERON:0002329!8.64e-09!83;UBERON:0003077!8.64e-09!83;UBERON:0003059!8.64e-09!83;UBERON:0007282!8.64e-09!83;UBERON:0009618!8.64e-09!83;UBERON:0007285!8.64e-09!83;UBERON:0000923!1.16e-08!604;UBERON:0005291!1.16e-08!604;UBERON:0006598!1.16e-08!604;UBERON:0002532!1.16e-08!604;UBERON:0002050!1.38e-08!605;UBERON:0005423!1.38e-08!605;UBERON:0000467!3.44e-08!625;UBERON:0000480!4.07e-08!626;UBERON:0000481!7.15e-08!347;UBERON:0004290!8.03e-08!70;UBERON:0000062!3.47e-07!511 | |ontology_enrichment_uberon=UBERON:0000922!5.52e-10!612;UBERON:0000468!6.16e-10!659;UBERON:0000914!8.64e-09!83;UBERON:0002329!8.64e-09!83;UBERON:0003077!8.64e-09!83;UBERON:0003059!8.64e-09!83;UBERON:0007282!8.64e-09!83;UBERON:0009618!8.64e-09!83;UBERON:0007285!8.64e-09!83;UBERON:0000923!1.16e-08!604;UBERON:0005291!1.16e-08!604;UBERON:0006598!1.16e-08!604;UBERON:0002532!1.16e-08!604;UBERON:0002050!1.38e-08!605;UBERON:0005423!1.38e-08!605;UBERON:0000467!3.44e-08!625;UBERON:0000480!4.07e-08!626;UBERON:0000481!7.15e-08!347;UBERON:0004290!8.03e-08!70;UBERON:0000062!3.47e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.77e-14;25!UBERON:0005090;5.13e-13;2!UBERON:0001630;5.13e-13;2!UBERON:0005284;6.46e-11;5!UBERON:0004151;3.99e-09;3!UBERON:0003978;9.81e-09;3!UBERON:0000946;9.81e-09;3!UBERON:0002385;2.89e-08;31!UBERON:0001015;2.89e-08;31!UBERON:0000383;2.89e-08;31!UBERON:0002084;1.75e-07;1!UBERON:0002082;1.75e-07;1!UBERON:0002079;1.86e-07;1!UBERON:0001389;2.16e-07;1!UBERON:0000026;2.16e-07;1!UBERON:0008784;2.16e-07;1!UBERON:0006058;2.16e-07;1!UBERON:0003663;2.16e-07;1!UBERON:0004256;2.16e-07;1!UBERON:0004708;2.16e-07;1!UBERON:0002101;2.16e-07;1!UBERON:0004709;2.16e-07;1!UBERON:0002529;2.16e-07;1!UBERON:0010538;2.16e-07;1!UBERON:0003661;2.16e-07;1!UBERON:0010890;2.16e-07;1!UBERON:0002471;2.16e-07;1!UBERON:0001383;2.16e-07;1!UBERON:0010758;2.16e-07;1!UBERON:0010707;2.16e-07;1!UBERON:0000978;2.16e-07;1!UBERON:0002103;2.16e-07;1!UBERON:0001665;2.16e-07;1!UBERON:0003823;2.16e-07;1!UBERON:0000154;2.16e-07;1!UBERON:0010709;2.16e-07;1!UBERON:0002426;2.67e-07;1!UBERON:0003831;2.67e-07;1!UBERON:0003898;2.67e-07;1!UBERON:0004830;2.67e-07;1!UBERON:0003830;2.67e-07;1!UBERON:0005175;2.67e-07;1!UBERON:0001774;2.67e-07;1!UBERON:0001103;2.67e-07;1!UBERON:0002135;3.60e-07;1!UBERON:0002146;3.60e-07;1!UBERON:0005623;3.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,4.98e-13,2;UBERON:0001630,4.98e-13,2;UBERON:0007100,7.58e-13,27;UBERON:0002329,5.53e-11,71;UBERON:0003059,5.53e-11,71;UBERON:0007282,5.53e-11,71;UBERON:0004290,5.53e-11,71;UBERON:0009618,5.53e-11,71;UBERON:0001134,6.59e-11,62;UBERON:0002036,6.59e-11,62;UBERON:0003082,6.59e-11,62;UBERON:0005284,7.05e-11,5;UBERON:0003077,8.53e-11,72;UBERON:0007285,8.53e-11,72;UBERON:0007524,1.30e-10,73;UBERON:0002385,1.70e-10,64;UBERON:0001015,1.70e-10,64;UBERON:0000383,1.70e-10,64;UBERON:0007503,9.05e-10,78;UBERON:0004151,3.99e-09,3;UBERON:0000486,4.98e-09,83;UBERON:0003978,1.06e-08,3;UBERON:0009751,1.06e-08,3;UBERON:0000946,1.06e-08,3;UBERON:0002523,1.06e-08,3;UBERON:0005983,1.06e-08,3;UBERON:0002165,1.06e-08,3;UBERON:0002062,1.06e-08,3;UBERON:0007280,1.06e-08,3;UBERON:0002084,1.75e-07,1;UBERON:0002082,1.75e-07,1;UBERON:0010226,1.75e-07,1;UBERON:0002079,1.86e-07,1;UBERON:0005418,2.10e-07,1;UBERON:0001389,2.10e-07,1;UBERON:0000026,2.10e-07,1;UBERON:0008784,2.10e-07,1;UBERON:0006058,2.10e-07,1;UBERON:0003663,2.10e-07,1;UBERON:0004256,2.10e-07,1;UBERON:0004708,2.10e-07,1;UBERON:0002101,2.10e-07,1;UBERON:0004709,2.10e-07,1;UBERON:0002529,2.10e-07,1;UBERON:0010538,2.10e-07,1;UBERON:0003661,2.10e-07,1;UBERON:0010890,2.10e-07,1;UBERON:0002471,2.10e-07,1;UBERON:0001383,2.10e-07,1;UBERON:0004357,2.10e-07,1;UBERON:0004347,2.10e-07,1;UBERON:0005420,2.10e-07,1;UBERON:0005732,2.10e-07,1;UBERON:0010758,2.10e-07,1;UBERON:0010707,2.10e-07,1;UBERON:0000978,2.10e-07,1;UBERON:0002103,2.10e-07,1;UBERON:0001665,2.10e-07,1;UBERON:0003823,2.10e-07,1;UBERON:0000154,2.10e-07,1;UBERON:0010709,2.10e-07,1;UBERON:0005733,2.10e-07,1;UBERON:0005730,2.10e-07,1;UBERON:0002426,2.67e-07,1;UBERON:0003831,2.67e-07,1;UBERON:0003898,2.67e-07,1;UBERON:0004830,2.67e-07,1;UBERON:0003830,2.67e-07,1;UBERON:0005175,2.67e-07,1;UBERON:0001774,2.67e-07,1;UBERON:0001103,2.67e-07,1;UBERON:0010084,2.67e-07,1;UBERON:0002135,3.60e-07,1;UBERON:0002146,4.06e-07,1;UBERON:0005623,4.06e-07,1;UBERON:0002204,4.16e-07,167;UBERON:0003103,6.72e-07,68 | |||
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| ||
|short_description=p@chr1:31842256..31842273,+ | |short_description=p@chr1:31842256..31842273,+ | ||
}} | }} |
Latest revision as of 07:10, 28 July 2015
Short description: | p@chr1:31842256..31842273, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:31842256..31842273, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 8.98e-18 | 3 |
enteric smooth muscle cell | 2.00e-17 | 3 |
smooth muscle cell of large intestine | 2.00e-17 | 3 |
smooth muscle cell of colon | 2.00e-17 | 3 |
immature conventional dendritic cell | 5.97e-09 | 5 |
common dendritic progenitor | 5.97e-09 | 5 |
perirenal preadipocyte | 2.23e-07 | 1 |
smooth muscle cell | 2.82e-07 | 43 |
smooth muscle myoblast | 2.82e-07 | 43 |
muscle cell | 7.59e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.07e-12 | 2 |
vascular disease | 5.14e-07 | 1 |
ischemia | 5.14e-07 | 1 |
extrinsic cardiomyopathy | 5.14e-07 | 1 |
myocardial ischemia | 5.14e-07 | 1 |
myocardial infarction | 5.14e-07 | 1 |
cardiovascular system disease | 9.21e-07 | 4 |