FFCP PHASE1:Hg19::chr1:248020587..248020624,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25893 | |EntrezGene=25893 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24150 | |HGNC=24150 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK096188_5end | |association_with_transcript=0bp_to_AK096188_5end | ||
|cluster_id=chr1:248020587..248020624,+ | |||
|coexpression_cluster_id=C3960 | |||
|description=CAGE_peak_2_at_TRIM58_5end | |description=CAGE_peak_2_at_TRIM58_5end | ||
|id=chr1:248020587..248020624,+ | |id=chr1:248020587..248020624,+ | ||
|ontology_enrichment_celltype=CL:0000077!6.10e-13!19 | |ontology_enrichment_celltype=CL:0000077!6.10e-13!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.39e-20;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.33e-20,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!8.04e-10!31;DOID:1240!2.73e-07!39 | |ontology_enrichment_disease=DOID:8692!8.04e-10!31;DOID:1240!2.73e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.21e-13;31!DOID:1240;7.72e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.01e-14,31;DOID:1240,1.49e-10,39;DOID:2531,2.20e-08,51;DOID:0060083,2.20e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.11e-10!32;UBERON:0002020!1.45e-10!34;UBERON:0003528!1.45e-10!34;UBERON:0000178!1.73e-10!15;UBERON:0000179!1.73e-10!15;UBERON:0000463!1.73e-10!15;UBERON:0001893!5.77e-10!34;UBERON:0003075!6.64e-10!86;UBERON:0007284!6.64e-10!86;UBERON:0001049!1.25e-09!57;UBERON:0005068!1.25e-09!57;UBERON:0006241!1.25e-09!57;UBERON:0007135!1.25e-09!57;UBERON:0002791!1.57e-09!33;UBERON:0002780!5.37e-09!41;UBERON:0001890!5.37e-09!41;UBERON:0006240!5.37e-09!41;UBERON:0002346!5.38e-09!90;UBERON:0002619!6.02e-09!22;UBERON:0002616!1.11e-08!59;UBERON:0003080!1.61e-08!42;UBERON:0001950!1.84e-08!20;UBERON:0000956!3.38e-08!25;UBERON:0000203!3.38e-08!25;UBERON:0007023!6.19e-08!115;UBERON:0000073!6.48e-08!94;UBERON:0001016!6.48e-08!94;UBERON:0005743!6.63e-08!86;UBERON:0003056!7.28e-08!61;UBERON:0000955!1.27e-07!69;UBERON:0006238!1.27e-07!69;UBERON:0001017!8.86e-07!82 | |ontology_enrichment_uberon=UBERON:0001869!1.11e-10!32;UBERON:0002020!1.45e-10!34;UBERON:0003528!1.45e-10!34;UBERON:0000178!1.73e-10!15;UBERON:0000179!1.73e-10!15;UBERON:0000463!1.73e-10!15;UBERON:0001893!5.77e-10!34;UBERON:0003075!6.64e-10!86;UBERON:0007284!6.64e-10!86;UBERON:0001049!1.25e-09!57;UBERON:0005068!1.25e-09!57;UBERON:0006241!1.25e-09!57;UBERON:0007135!1.25e-09!57;UBERON:0002791!1.57e-09!33;UBERON:0002780!5.37e-09!41;UBERON:0001890!5.37e-09!41;UBERON:0006240!5.37e-09!41;UBERON:0002346!5.38e-09!90;UBERON:0002619!6.02e-09!22;UBERON:0002616!1.11e-08!59;UBERON:0003080!1.61e-08!42;UBERON:0001950!1.84e-08!20;UBERON:0000956!3.38e-08!25;UBERON:0000203!3.38e-08!25;UBERON:0007023!6.19e-08!115;UBERON:0000073!6.48e-08!94;UBERON:0001016!6.48e-08!94;UBERON:0005743!6.63e-08!86;UBERON:0003056!7.28e-08!61;UBERON:0000955!1.27e-07!69;UBERON:0006238!1.27e-07!69;UBERON:0001017!8.86e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.74e-13;15!UBERON:0000179;5.74e-13;15!UBERON:0000463;5.74e-13;15!UBERON:0002390;1.24e-08;32!UBERON:0003528;1.52e-08;34!UBERON:0002020;1.52e-08;34!UBERON:0001869;3.11e-08;32!UBERON:0001893;9.74e-08;34!UBERON:0002619;2.11e-07;22!UBERON:0002791;2.18e-07;32!UBERON:0001950;2.35e-07;20!UBERON:0005631;3.51e-07;10!UBERON:0000158;3.51e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.99e-13,15;UBERON:0000179,6.99e-13,15;UBERON:0000463,6.99e-13,15;UBERON:0003528,1.41e-09,34;UBERON:0002020,1.41e-09,34;UBERON:0001869,2.60e-09,32;UBERON:0001893,1.84e-08,34;UBERON:0002791,2.80e-08,32;UBERON:0002619,9.47e-08,22;UBERON:0001950,1.06e-07,20;UBERON:0005631,1.52e-07,14;UBERON:0000158,1.52e-07,14 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.422863212287913,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0.737201809504527,0.697801167972428,0,2.63766978228454,0,0,0,0,0,0,0.61560529038394,0.612002073732759,0.940364164434263,0,0.136874425072884,0.251085279189606,0,0,0,1.57345710739562,0.383829398097213,0.619264493264304,0,0,0,0,0,4.11040615068786,0,0,0.434021741431704,1.34349284543955,0.32389366601898,0,0.872389432677388,0,0,0.464858073811369,0,0.309706370895104,0.863077176966451,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0.989553900560148,0,0,0.580418477257168,0,0,0.75374599577023,0.521482918420201,0.217188844705117,0,0,0,0.211255286311942,0,0,0.22465726229299,0,0.48217676009124,0.855038231223746,0,0.182664153764634,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,3.96513985737078,2.80254281490768,4.21414535640123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0.973269740605272,0,0.665188192387692,0.175669571386252,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0.286836620748814,0.354668382198357,6.72813120170769,1.06748995729705,0.74000264525148,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0.773043412653187,3.00020732649918,2.00763216772303,0,0,0,0,0,0,0,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0.548751427043128,0,0.301586917234893,0,0,2.07986957055916,0,0.463721619900307,0,0.144366447761074,0,0.190254152234598,0,0,1.72351904261178,0,0.148631162288728,0.93733833986777,0.16798212819886,0,0.985143749731331,0.581267877027924,2.30029607499127,0,1.14462964217194,0.829312462163088,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0.26593811658487,2.08014873822732,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,5.42590878707255,3.48613383440118,8.99756920638513,1.2162378064119,2.00902836572851,0,0,0,0,5.79125226670317,1.84928690295345,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0.749007023947182,2.99161459204025,2.90090859405225,0,0,0,1.03985430765404,0,0,0,0,0,0,0,0,0,0.195801157462741,1.02943027143257,0.82707210449155,1.2942852049117,0.640365346820666,0.606255142892519,3.32870879020994,0,1.24053903909388,0.460385919864187,1.96462066103151,1.28139149255701,0.511707249066704,2.89537058058494,1.48418066444991,0,0.532685175939381,0.328508624055237,0,0.348631135379878,0,0,0.0920809889358963,0,0,0,0.902399225814824,0.616122696835318,0,5.84556898613043,0.844413031143006,0,0,0.215915916102139,0,1.35473218771926,2.50844886927427,0,0,1.56712328305525,33.9852808801199,42.3525430660339,1.02580050046556,4.26419039409617,3.25378394664303,4.01859945426117,2.7470839445503,2.0627374980147,0,0,3.21367859688319,0,0,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,1.2655176988749,0.38126038784765,0,0,0,0,0,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,4.0481834334015,0.86101074534246,0,0.443430153536676,0.918893600827838,27.9096185077693,24.468390628556,23.9251818613148,6.90872148827588,6.58179636937911,20.751145958167,23.2213518012389,25.3800056414167,0,1.92495971052672,0.980160863924127,0,0,0.995985806877798,1.4348364545594,6.58611925728295,1.7235483311913,6.77355464716425,1.29848776109822,1.12318871245384,0,0,2.50634477090067,3.89371088943688,0.321176150207399,0,0,0,3.99412993600995,3.13146551049382,3.8375302593739,3.12620952643264,3.34087408674291,6.15436994738562,6.49093628342359,13.6559506879106,7.04935025439248,0,0,0.485442086998054,0,0,2.86493381685228,4.45447021248958,4.30024982938925,3.97659059106519,0.844016498463076,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,16.7638164642858,0,0,1.02044907978036,1.99613798001194,0,0,0,0,0,3.54581522651905,0,0,0,1.77148277162768,1.4471572635049,0,0,0,1.53569778007781,0,0,0.0769502585037971,46.2604746738825,0.23056390438806,0.179515288819544,0,9.25103363222567,3.48070854927077,7.99552164027952,0,5.33732871743084,5.81740886650547,0.676786981851542,0.784250137270958,1.1747511088309,4.93359705082881,4.29128763247022,0,0,0,0,0.995261931078505,0.353830258013357,0,2.07564790076435,1.60633120630454,2.29728288912002,0.067401132980677,0,0.468528891450678,0,0,0,0,0,2.14250933141343,0.31593289814244,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0.677942222341597,0.822251547880505,4.17300684576278,1.83601308272048,0,1.84365286578528,0,2.79733453414982,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,2.55493176133945,30.9431117822369,0,0.558564802544508,0,0,0,0.429226048136571,0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| ||
|short_description=p2@TRIM58 | |short_description=p2@TRIM58 | ||
}} | }} |
Latest revision as of 00:30, 17 September 2015
Short description: | p2@TRIM58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIM58_5end |
Coexpression cluster: | C3960_mesothelioma_cholangiocellular_Reticulocytes_thyroid_granulosa_papillary_Whole |
Association with transcript: | 0bp_to_AK096188_5end |
EntrezGene: | TRIM58 |
HGNC: | 24150 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.33e-20 | 19 |
Ontology term | p-value | n |
---|---|---|
blood | 6.99e-13 | 15 |
haemolymphatic fluid | 6.99e-13 | 15 |
organism substance | 6.99e-13 | 15 |
brain grey matter | 1.41e-09 | 34 |
gray matter | 1.41e-09 | 34 |
cerebral hemisphere | 2.60e-09 | 32 |
telencephalon | 1.84e-08 | 34 |
regional part of telencephalon | 2.80e-08 | 32 |
regional part of cerebral cortex | 9.47e-08 | 22 |
neocortex | 1.06e-07 | 20 |
extraembryonic membrane | 1.52e-07 | 14 |
membranous layer | 1.52e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.01e-14 | 31 |
leukemia | 1.49e-10 | 39 |
hematologic cancer | 2.20e-08 | 51 |
immune system cancer | 2.20e-08 | 51 |