FFCP PHASE1:Hg19::chr1:236046891..236046902,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1130 | |EntrezGene=1130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |HGNC=1968 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000468107_5end | |association_with_transcript=13bp_to_ENST00000468107_5end | ||
|cluster_id=chr1:236046891..236046902,- | |||
|coexpression_cluster_id=C610 | |||
|description=CAGE_peak_12_at_LYST_5end | |description=CAGE_peak_12_at_LYST_5end | ||
|id=chr1:236046891..236046902,- | |id=chr1:236046891..236046902,- | ||
|ontology_enrichment_celltype=CL:0000148!8.38e-17!10;CL:0000541!8.38e-17!10;CL:0000990!2.55e-13!8;CL:0000147!1.17e-11!14;CL:0002567!1.83e-11!3;CL:0000451!9.34e-11!10;CL:0000710!8.32e-08!20 | |ontology_enrichment_celltype=CL:0000148!8.38e-17!10;CL:0000541!8.38e-17!10;CL:0000990!2.55e-13!8;CL:0000147!1.17e-11!14;CL:0002567!1.83e-11!3;CL:0000451!9.34e-11!10;CL:0000710!8.32e-08!20 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.24e-87;10!CL:0000147;1.29e-62;14!CL:0002567;1.81e-54;3!CL:0000710;7.89e-44;20!CL:0000075;1.91e-32;27!CL:0002077;1.04e-22;34!CL:0002566;1.56e-19;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.33e-87,10;CL:0000541,1.33e-87,10;CL:0000147,1.35e-62,14;CL:0002567,2.17e-54,3;CL:0000710,8.15e-44,20;CL:0000075,1.95e-32,27;CL:0002077,9.90e-26,34;CL:0000333,2.63e-20,41;CL:0002566,1.56e-19,1;CL:0000133,3.06e-14,59;CL:0000221,1.10e-11,72 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.69e-19;1!CL:0000133;6.11e-08;59 | |||
|ontology_enrichment_disease=DOID:1909!3.03e-08!2 | |ontology_enrichment_disease=DOID:1909!3.03e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;4.32e-37;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.94e-37,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.31e-15!115;UBERON:0001049!1.45e-09!57;UBERON:0005068!1.45e-09!57;UBERON:0006241!1.45e-09!57;UBERON:0007135!1.45e-09!57;UBERON:0003076!3.61e-09!15;UBERON:0003057!3.61e-09!15;UBERON:0005743!7.75e-08!86;UBERON:0001017!2.31e-07!82;UBERON:0003075!4.95e-07!86;UBERON:0007284!4.95e-07!86;UBERON:0000073!9.86e-07!94;UBERON:0001016!9.86e-07!94 | |ontology_enrichment_uberon=UBERON:0007023!6.31e-15!115;UBERON:0001049!1.45e-09!57;UBERON:0005068!1.45e-09!57;UBERON:0006241!1.45e-09!57;UBERON:0007135!1.45e-09!57;UBERON:0003076!3.61e-09!15;UBERON:0003057!3.61e-09!15;UBERON:0005743!7.75e-08!86;UBERON:0001017!2.31e-07!82;UBERON:0003075!4.95e-07!86;UBERON:0007284!4.95e-07!86;UBERON:0000073!9.86e-07!94;UBERON:0001016!9.86e-07!94 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p12@LYST | |short_description=p12@LYST | ||
}} | }} |
Latest revision as of 13:26, 16 September 2015
Short description: | p12@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_LYST_5end |
Coexpression cluster: | C610_melanoma_Melanocyte_migratory_mycosis_cerebellum_epithelioid_retina |
Association with transcript: | 13bp_to_ENST00000468107_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.33e-87 | 10 |
melanoblast | 1.33e-87 | 10 |
pigment cell | 1.35e-62 | 14 |
light melanocyte | 2.17e-54 | 3 |
neurecto-epithelial cell | 8.15e-44 | 20 |
columnar/cuboidal epithelial cell | 1.95e-32 | 27 |
ecto-epithelial cell | 9.90e-26 | 34 |
migratory neural crest cell | 2.63e-20 | 41 |
dark melanocyte | 1.56e-19 | 1 |
neurectodermal cell | 3.06e-14 | 59 |
ectodermal cell | 1.10e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.94e-37 | 2 |